Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS12225

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,613,708	-				+0.9
2,613,708	-		DZA65_RS12220	0.66	-0.7
2,613,773	+		DZA65_RS12220	0.71	-0.4
2,613,774	-		DZA65_RS12220	0.71	-0.3
2,613,786	+		DZA65_RS12220	0.72	+0.5
2,613,786	+		DZA65_RS12220	0.72	-1.1
2,613,786	+		DZA65_RS12220	0.72	+0.2
2,613,786	+		DZA65_RS12220	0.72	+0.1
2,613,787	-		DZA65_RS12220	0.72	+0.0
2,613,787	-		DZA65_RS12220	0.72	-0.7
2,613,900	+		DZA65_RS12220	0.80	-0.5
2,613,900	+		DZA65_RS12220	0.80	-0.8
2,613,900	+		DZA65_RS12220	0.80	-0.7
2,613,989	+		DZA65_RS12220	0.87	-0.8
2,613,989	+		DZA65_RS12220	0.87	+0.5
2,613,989	+		DZA65_RS12220	0.87	-0.9
2,613,989	+		DZA65_RS12220	0.87	-1.3
2,613,990	-		DZA65_RS12220	0.87	-1.0
2,613,990	-		DZA65_RS12220	0.87	-2.1
2,613,990	-		DZA65_RS12220	0.87	-0.4
2,614,159	+				+0.2
2,614,161	-				-0.7
2,614,161	-				-0.5
2,614,223	+		DZA65_RS12225	0.13	-1.0
2,614,223	+		DZA65_RS12225	0.13	-1.7
2,614,223	+		DZA65_RS12225	0.13	-0.0
2,614,223	+		DZA65_RS12225	0.13	-0.0
2,614,223	+		DZA65_RS12225	0.13	-0.3
2,614,224	-		DZA65_RS12225	0.13	+1.3
2,614,224	-		DZA65_RS12225	0.13	+0.5
2,614,224	-		DZA65_RS12225	0.13	+1.0
2,614,224	-		DZA65_RS12225	0.13	+0.7
2,614,530	+		DZA65_RS12225	0.77	-2.0
2,614,530	+		DZA65_RS12225	0.77	+1.3
2,614,531	-		DZA65_RS12225	0.77	+0.3
2,614,531	-		DZA65_RS12225	0.77	-1.0
2,614,531	-		DZA65_RS12225	0.77	-0.4
2,614,666	+				-0.3
2,614,666	+				+0.6
2,614,666	+				-0.0
2,614,666	+				+0.1
2,614,666	+				-0.5
2,614,667	-				-0.8
2,614,683	+				+0.3
2,615,031	+		DZA65_RS12230	0.75	-0.3
2,615,032	-		DZA65_RS12230	0.75	+0.3
2,615,107	+		DZA65_RS12230	0.90	+0.4
2,615,455	+		DZA65_RS12235	0.24	+0.2
2,615,455	+		DZA65_RS12235	0.24	-1.4
2,615,455	+		DZA65_RS12235	0.24	+0.6
2,615,455	+		DZA65_RS12235	0.24	+1.1
2,615,455	+		DZA65_RS12235	0.24	-0.1
2,615,456	-		DZA65_RS12235	0.24	+0.1
2,615,456	-		DZA65_RS12235	0.24	-1.8
2,615,456	-		DZA65_RS12235	0.24	-0.4
2,615,457	+		DZA65_RS12235	0.24	-1.4
2,615,457	+		DZA65_RS12235	0.24	-0.3
2,615,458	-		DZA65_RS12235	0.25	+0.7
2,615,458	-		DZA65_RS12235	0.25	-1.0
2,615,458	-		DZA65_RS12235	0.25	-1.3