Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS12115

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,587,774	+		DZA65_RS12110	0.29	-1.3
2,587,784	+		DZA65_RS12110	0.30	-1.7
2,587,785	-		DZA65_RS12110	0.30	-0.1
2,587,851	+		DZA65_RS12110	0.36	+1.3
2,587,852	-		DZA65_RS12110	0.36	+0.6
2,587,852	-		DZA65_RS12110	0.36	+2.3
2,587,852	-		DZA65_RS12110	0.36	-1.0
2,588,121	-		DZA65_RS12110	0.62	-0.0
2,588,178	-		DZA65_RS12110	0.68	-0.1
2,588,363	+		DZA65_RS12110	0.86	-0.3
2,588,363	+		DZA65_RS12110	0.86	-0.1
2,588,363	+		DZA65_RS12110	0.86	-0.6
2,588,363	+		DZA65_RS12110	0.86	+0.3
2,588,363	+		DZA65_RS12110	0.86	-0.6
2,588,363	+		DZA65_RS12110	0.86	-0.2
2,588,364	-		DZA65_RS12110	0.86	-1.9
2,588,364	-		DZA65_RS12110	0.86	-0.3
2,588,364	-		DZA65_RS12110	0.86	-1.5
2,588,364	-		DZA65_RS12110	0.86	-1.0
2,588,364	-		DZA65_RS12110	0.86	-1.0
2,588,385	-		DZA65_RS12110	0.88	-0.1
2,588,385	-		DZA65_RS12110	0.88	+0.6
2,588,492	+				+1.0
2,588,493	-				+0.1
2,588,493	-				-1.0
2,588,493	-				-0.5
2,588,495	+				-0.4
2,588,495	+				+0.9
2,588,495	+				-0.0
2,588,495	+				-0.2
2,588,495	+				-0.6
2,588,504	+				-0.4
2,588,543	+				-0.5
2,588,544	-				+0.1
2,588,544	-				-0.5
2,588,707	+		DZA65_RS12115	0.10	+0.3
2,588,775	-		DZA65_RS12115	0.27	-1.5
2,588,775	-		DZA65_RS12115	0.27	+1.0
2,588,775	-		DZA65_RS12115	0.27	-0.5
2,588,780	+		DZA65_RS12115	0.28	-1.0
2,588,912	+		DZA65_RS12115	0.60	+0.3
2,588,913	-		DZA65_RS12115	0.60	-1.8
2,588,956	-		DZA65_RS12115	0.71	-0.7
2,589,033	+		DZA65_RS12115	0.90	-0.7
2,589,033	+		DZA65_RS12115	0.90	+0.3
2,589,034	-		DZA65_RS12115	0.90	-0.7
2,589,034	-		DZA65_RS12115	0.90	-1.5
2,589,135	-		DZA65_RS12120	0.33	-1.1
2,589,281	-				-0.1
2,589,281	-				+1.9
2,589,281	-				-1.4
2,589,356	+				-0.4
2,589,356	+				-0.8
2,589,357	-				-0.5
2,589,357	-				-1.7
2,589,357	-				-2.1
2,589,357	-				-1.7
2,589,357	-				+0.3
2,589,357	-				-0.5
2,589,357	-				-2.0
2,589,357	-				+0.5
2,589,513	-		DZA65_RS12125	0.11	-0.3
2,589,536	+		DZA65_RS12125	0.12	+0.6
2,589,536	+		DZA65_RS12125	0.12	-0.9
2,589,537	-		DZA65_RS12125	0.12	-3.1
2,589,775	-		DZA65_RS12125	0.23	+0.1
2,589,780	+		DZA65_RS12125	0.23	-0.2
2,589,780	+		DZA65_RS12125	0.23	+1.0
2,589,781	-		DZA65_RS12125	0.23	-2.1
2,589,781	-		DZA65_RS12125	0.23	+1.1
2,589,822	+		DZA65_RS12125	0.25	-1.0
2,589,823	-		DZA65_RS12125	0.25	-1.3
2,589,847	-		DZA65_RS12125	0.27	+0.6
2,589,870	+		DZA65_RS12125	0.28	-1.3
2,589,870	+		DZA65_RS12125	0.28	+0.7
2,589,871	-		DZA65_RS12125	0.28	+0.6