Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS11780

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,513,527	+				-0.7
2,513,527	+				-1.1
2,513,527	+				+0.7
2,513,527	+				-1.7
2,513,527	+				+0.6
2,513,527	+				+0.2
2,513,528	-				-1.7
2,513,528	-				-0.7
2,513,528	-				+1.3
2,513,532	+				-0.5
2,513,532	+				-0.2
2,513,532	+				-0.7
2,513,532	+				-1.3
2,513,533	-				+0.3
2,513,533	-				-0.1
2,513,533	-				-1.0
2,513,533	-				-0.6
2,513,533	-				-1.5
2,513,533	-				-0.5
2,513,538	+				+0.3
2,513,538	+				-0.1
2,513,538	+				-1.0
2,513,539	-				+0.3
2,513,539	-				-1.9
2,513,539	-				+0.2
2,513,539	-				-1.0
2,513,539	-				-1.0
2,513,539	-				-0.9
2,513,540	+				+0.9
2,513,540	+				-0.3
2,513,552	+				-0.3
2,513,552	+				+0.3
2,513,552	+				-1.9
2,513,552	+				-0.1
2,513,552	+				-1.9
2,513,552	+				+0.3
2,513,553	-				+0.6
2,513,553	-				+0.3
2,513,553	-				-0.7
2,513,553	-				+1.0
2,513,553	-				+0.2
2,513,553	-				-2.4
2,513,561	-				-1.0
2,513,572	+				-0.7
2,513,572	+				-0.0
2,513,572	+				-0.6
2,513,572	+				-1.1
2,513,572	+				-1.3
2,513,572	+				-0.1
2,513,572	+				-3.2
2,513,573	-				-0.3
2,513,573	-				-0.7
2,513,573	-				-0.3
2,513,573	-				-0.4
2,513,573	-				-0.7
2,513,573	-				-0.4
2,513,573	-				-0.5
2,513,573	-				+0.3
2,513,573	-				-1.0
2,513,655	-				-0.1
2,513,686	+				-1.3
2,513,686	+				-1.3
2,513,765	+		DZA65_RS11780	0.13	+0.9
2,513,765	+		DZA65_RS11780	0.13	-2.1
2,513,765	+		DZA65_RS11780	0.13	-0.3
2,513,766	-		DZA65_RS11780	0.13	-1.3
2,513,767	+		DZA65_RS11780	0.14	+1.8
2,513,767	+		DZA65_RS11780	0.14	+0.1
2,513,767	+		DZA65_RS11780	0.14	-0.5
2,513,768	-		DZA65_RS11780	0.14	+0.3
2,513,774	-		DZA65_RS11780	0.14	-1.0
2,513,787	+		DZA65_RS11780	0.16	-1.9
2,513,787	+		DZA65_RS11780	0.16	-1.0
2,513,788	-		DZA65_RS11780	0.16	-0.9
2,513,788	-		DZA65_RS11780	0.16	-0.3
2,513,794	-		DZA65_RS11780	0.17	-1.0
2,513,867	+		DZA65_RS11780	0.25	-2.3
2,513,942	+		DZA65_RS11780	0.33	-0.9
2,513,942	+		DZA65_RS11780	0.33	-0.3
2,513,942	+		DZA65_RS11780	0.33	+0.3
2,513,942	+		DZA65_RS11780	0.33	-0.5
2,513,942	+		DZA65_RS11780	0.33	-0.5
2,513,942	+		DZA65_RS11780	0.33	+0.1
2,513,942	+		DZA65_RS11780	0.33	+1.0
2,513,942	+		DZA65_RS11780	0.33	-1.0
2,513,942	+		DZA65_RS11780	0.33	+0.0
2,513,942	+		DZA65_RS11780	0.33	-0.3
2,513,943	-		DZA65_RS11780	0.33	+0.3
2,513,943	-		DZA65_RS11780	0.33	-0.0
2,513,943	-		DZA65_RS11780	0.33	-0.3
2,513,943	-		DZA65_RS11780	0.33	-0.1
2,513,943	-		DZA65_RS11780	0.33	+1.0
2,513,943	-		DZA65_RS11780	0.33	-1.1
2,513,943	-		DZA65_RS11780	0.33	-0.3
2,513,943	-		DZA65_RS11780	0.33	-0.4
2,513,943	-		DZA65_RS11780	0.33	-0.0
2,513,943	-		DZA65_RS11780	0.33	-1.0
2,513,946	+		DZA65_RS11780	0.33	+0.1
2,513,947	-		DZA65_RS11780	0.33	+0.8
2,513,947	-		DZA65_RS11780	0.33	-1.0
2,513,947	-		DZA65_RS11780	0.33	+0.3
2,514,176	+		DZA65_RS11780	0.59	-0.3
2,514,176	+		DZA65_RS11780	0.59	-2.0
2,514,176	+		DZA65_RS11780	0.59	-0.5
2,514,177	-		DZA65_RS11780	0.59	-0.5
2,514,177	-		DZA65_RS11780	0.59	+0.9
2,514,177	-		DZA65_RS11780	0.59	-0.7
2,514,177	-		DZA65_RS11780	0.59	-1.0
2,514,177	-		DZA65_RS11780	0.59	-0.4
2,514,186	+		DZA65_RS11780	0.60	+0.3
2,514,186	+		DZA65_RS11780	0.60	-1.3
2,514,187	-		DZA65_RS11780	0.60	+2.3
2,514,187	-		DZA65_RS11780	0.60	+0.3
2,514,187	-		DZA65_RS11780	0.60	-0.9
2,514,217	+		DZA65_RS11780	0.63	+0.5
2,514,235	+		DZA65_RS11780	0.65	-0.0
2,514,263	+		DZA65_RS11780	0.68	-1.7
2,514,263	+		DZA65_RS11780	0.68	+0.1
2,514,264	-		DZA65_RS11780	0.69	-2.1
2,514,350	+		DZA65_RS11780	0.78	+0.3
2,514,393	+		DZA65_RS11780	0.83	-0.9
2,514,394	-		DZA65_RS11780	0.83	-2.6
2,514,411	-		DZA65_RS11780	0.85	-0.7
2,514,416	-		DZA65_RS11780	0.85	+0.1
2,514,466	+				+0.3
2,514,466	+				+0.3
2,514,467	-				-1.0
2,514,491	-				-0.6
2,514,585	+				-0.7
2,514,644	+				-1.9
2,514,645	-				-0.0
2,514,687	+		DZA65_RS11785	0.16	+2.4
2,514,687	+		DZA65_RS11785	0.16	+0.6
2,514,688	-		DZA65_RS11785	0.16	-1.9
2,514,688	-		DZA65_RS11785	0.16	+0.4
2,514,688	-		DZA65_RS11785	0.16	-1.1
2,514,688	-		DZA65_RS11785	0.16	+0.0
2,514,688	-		DZA65_RS11785	0.16	+2.9
2,514,726	+		DZA65_RS11785	0.26	-0.7
2,514,727	-		DZA65_RS11785	0.26	-2.9
2,514,730	-		DZA65_RS11785	0.27	+1.3
2,514,774	+		DZA65_RS11785	0.38	+0.3
2,514,774	+		DZA65_RS11785	0.38	-0.7
2,514,777	+		DZA65_RS11785	0.38	-0.4
2,514,778	-		DZA65_RS11785	0.38	-0.3
2,514,800	+		DZA65_RS11785	0.44	+0.2
2,514,800	+		DZA65_RS11785	0.44	+0.9
2,514,800	+		DZA65_RS11785	0.44	-0.4
2,514,823	-		DZA65_RS11785	0.50	+0.3
2,514,823	-		DZA65_RS11785	0.50	+1.0
2,514,857	+		DZA65_RS11785	0.58	-1.1
2,514,857	+		DZA65_RS11785	0.58	-1.1
2,514,857	+		DZA65_RS11785	0.58	+0.2
2,514,857	+		DZA65_RS11785	0.58	-0.0
2,514,888	+		DZA65_RS11785	0.65	-0.7
2,514,888	+		DZA65_RS11785	0.65	-0.4
2,514,888	+		DZA65_RS11785	0.65	-0.7
2,514,888	+		DZA65_RS11785	0.65	+1.0
2,514,889	-		DZA65_RS11785	0.66	-0.0
2,514,889	-		DZA65_RS11785	0.66	-0.3
2,514,889	-		DZA65_RS11785	0.66	-1.6