Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS11675

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,492,303	+				-1.3
2,492,316	+				+0.3
2,492,341	+				+0.3
2,492,342	-				-0.0
2,492,342	-				-0.4
2,492,347	+				+0.0
2,492,380	-				-0.7
2,492,380	-				+0.7
2,492,393	-				-2.7
2,492,393	-				+0.8
2,492,500	+		DZA65_RS11670	0.20	-1.0
2,492,500	+		DZA65_RS11670	0.20	-1.5
2,492,500	+		DZA65_RS11670	0.20	-0.3
2,492,500	+		DZA65_RS11670	0.20	+0.3
2,492,500	+		DZA65_RS11670	0.20	-2.4
2,492,501	-		DZA65_RS11670	0.20	-0.6
2,492,562	+		DZA65_RS11670	0.27	-1.0
2,492,563	-		DZA65_RS11670	0.27	-0.2
2,492,563	-		DZA65_RS11670	0.27	+0.0
2,492,565	+		DZA65_RS11670	0.28	+0.0
2,492,566	-		DZA65_RS11670	0.28	-0.5
2,492,575	+		DZA65_RS11670	0.29	-0.3
2,492,575	+		DZA65_RS11670	0.29	-0.1
2,492,576	-		DZA65_RS11670	0.29	-2.8
2,492,779	+		DZA65_RS11670	0.53	-1.0
2,492,805	-		DZA65_RS11670	0.56	-0.3
2,492,808	-		DZA65_RS11670	0.57	-0.0
2,493,004	+		DZA65_RS11670	0.80	+1.1
2,493,004	+		DZA65_RS11670	0.80	-0.5
2,493,005	-		DZA65_RS11670	0.80	+0.1
2,493,005	-		DZA65_RS11670	0.80	-1.5
2,493,070	+		DZA65_RS11670	0.88	-1.3
2,493,070	+		DZA65_RS11670	0.88	-1.3
2,493,070	+		DZA65_RS11670	0.88	-0.8
2,493,071	-		DZA65_RS11670	0.88	-0.3
2,493,071	-		DZA65_RS11670	0.88	+0.2
2,493,094	+				-2.5
2,493,095	-				-0.0
2,493,138	+				+1.6
2,493,138	+				+0.1
2,493,138	+				+0.3
2,493,138	+				+0.2
2,493,138	+				+0.2
2,493,139	-				-1.2
2,493,139	-				-1.5
2,493,139	-				+0.2
2,493,151	-				-1.0
2,493,257	-				-0.8
2,493,334	-		DZA65_RS11675	0.11	+0.7
2,493,334	-		DZA65_RS11675	0.11	-0.5
2,493,343	-		DZA65_RS11675	0.13	-1.5
2,493,457	-		DZA65_RS11675	0.38	-0.3
2,493,511	+		DZA65_RS11675	0.50	-1.6
2,493,514	+		DZA65_RS11675	0.51	-0.5
2,493,514	+		DZA65_RS11675	0.51	+1.3
2,493,526	+		DZA65_RS11675	0.53	-0.1
2,493,529	-		DZA65_RS11675	0.54	-0.8
2,493,557	-		DZA65_RS11675	0.60	-1.4
2,493,594	+		DZA65_RS11675	0.68	-1.7
2,493,594	+		DZA65_RS11675	0.68	+0.3
2,493,594	+		DZA65_RS11675	0.68	+0.3
2,493,595	-		DZA65_RS11675	0.68	-0.8
2,493,595	-		DZA65_RS11675	0.68	-1.2
2,493,652	+		DZA65_RS11675	0.81	-1.5
2,493,653	-		DZA65_RS11675	0.81	-1.7
2,493,764	+				-0.0
2,493,769	+				-0.0
2,493,814	-				-0.4
2,493,827	+				+1.3
2,493,893	+				+0.2
2,493,893	+				+0.3
2,493,894	-				+0.2
2,493,895	+				-0.0
2,493,895	+				-0.3
2,493,896	-				+0.1
2,493,898	+				-1.7
2,493,899	-				+0.9
2,493,899	-				-0.1
2,493,899	-				+0.1
2,493,926	+				+0.1
2,493,927	-				-1.0
2,493,931	+				-0.5
2,493,992	+				-0.7
2,494,000	+				-0.0
2,494,000	+				+0.3
2,494,001	-				-1.1
2,494,001	-				-0.0
2,494,023	+				+0.4
2,494,053	+				+0.7
2,494,053	+				-0.1
2,494,054	-				-0.0
2,494,054	-				-1.9
2,494,054	-				-0.6
2,494,054	-				-0.7
2,494,120	+				+0.6
2,494,123	+				-1.2
2,494,123	+				-0.2
2,494,123	+				-1.7
2,494,123	+				-0.6
2,494,123	+				+0.1
2,494,123	+				-1.3
2,494,123	+				+0.7
2,494,124	-				-0.8
2,494,124	-				-0.3
2,494,124	-				+0.8
2,494,124	-				+0.9
2,494,124	-				+0.3
2,494,124	-				-1.6
2,494,148	+				+0.5
2,494,149	-				-2.7
2,494,149	-				-1.5
2,494,149	-				+0.1
2,494,149	-				-0.6
2,494,190	+				+1.3
2,494,191	-		DZA65_RS11680	0.11	+0.3
2,494,214	+		DZA65_RS11680	0.15	+0.2
2,494,215	-		DZA65_RS11680	0.15	-1.3
2,494,215	-		DZA65_RS11680	0.15	+0.4
2,494,282	+		DZA65_RS11680	0.27	-0.0
2,494,305	+		DZA65_RS11680	0.31	-1.3
2,494,305	+		DZA65_RS11680	0.31	+0.1
2,494,306	-		DZA65_RS11680	0.31	-1.5
2,494,306	-		DZA65_RS11680	0.31	+0.7
2,494,306	-		DZA65_RS11680	0.31	+1.9
2,494,319	+		DZA65_RS11680	0.33	+0.1
2,494,319	+		DZA65_RS11680	0.33	-0.9
2,494,366	+		DZA65_RS11680	0.42	-0.3
2,494,382	-		DZA65_RS11680	0.44	+0.3
2,494,426	+		DZA65_RS11680	0.52	+0.5
2,494,523	+		DZA65_RS11680	0.69	-0.9
2,494,565	+		DZA65_RS11680	0.76	-0.3
2,494,565	+		DZA65_RS11680	0.76	-0.1
2,494,565	+		DZA65_RS11680	0.76	-1.0
2,494,565	+		DZA65_RS11680	0.76	-2.0
2,494,566	-		DZA65_RS11680	0.76	-2.7
2,494,566	-		DZA65_RS11680	0.76	-0.3
2,494,566	-		DZA65_RS11680	0.76	-0.8
2,494,566	-		DZA65_RS11680	0.76	-0.0
2,494,566	-		DZA65_RS11680	0.76	+0.1
2,494,596	+		DZA65_RS11680	0.82	-0.2
2,494,596	+		DZA65_RS11680	0.82	-0.4
2,494,596	+		DZA65_RS11680	0.82	+0.9
2,494,597	-		DZA65_RS11680	0.82	-2.4
2,494,597	-		DZA65_RS11680	0.82	+0.3
2,494,597	-		DZA65_RS11680	0.82	-1.6
2,494,655	+				-0.6