Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS11595

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,473,857	+		DZA65_RS11585	0.90	-0.3
2,473,912	+				-1.2
2,473,912	+				-1.0
2,473,912	+				-1.0
2,473,913	-				-0.5
2,473,913	-				-0.7
2,473,913	-				+0.3
2,473,913	-				+1.0
2,473,913	-				-0.3
2,473,921	+				+0.1
2,473,921	+				+1.7
2,473,926	+				-1.6
2,473,927	-				+1.9
2,473,944	+				+0.5
2,473,945	-				-1.9
2,473,945	-				-0.7
2,473,948	+				+0.9
2,473,948	+				-2.4
2,473,949	-				-0.4
2,473,949	-				-0.9
2,473,969	+				+0.3
2,473,969	+				-0.5
2,473,970	-				-1.5
2,473,978	+				-0.0
2,473,979	-				-0.7
2,474,028	+				-0.0
2,474,041	+		DZA65_RS11590	0.11	+0.7
2,474,120	+		DZA65_RS11590	0.21	-0.7
2,474,121	-		DZA65_RS11590	0.21	-2.2
2,474,121	-		DZA65_RS11590	0.21	+0.7
2,474,172	+		DZA65_RS11590	0.27	+0.3
2,474,173	-		DZA65_RS11590	0.28	+0.9
2,474,173	-		DZA65_RS11590	0.28	-1.5
2,474,179	+		DZA65_RS11590	0.28	-1.5
2,474,180	-				+0.7
2,474,198	+		DZA65_RS11590	0.31	-0.1
2,474,199	-		DZA65_RS11590	0.31	-1.0
2,474,199	-		DZA65_RS11590	0.31	+0.3
2,474,199	-		DZA65_RS11590	0.31	+0.1
2,474,199	-		DZA65_RS11590	0.31	+0.3
2,474,199	-		DZA65_RS11590	0.31	-0.3
2,474,199	-		DZA65_RS11590	0.31	-0.9
2,474,201	-		DZA65_RS11590	0.31	+0.6
2,474,201	-		DZA65_RS11590	0.31	-0.8
2,474,201	-		DZA65_RS11590	0.31	-1.4
2,474,228	-		DZA65_RS11590	0.34	-1.3
2,474,348	+		DZA65_RS11590	0.49	+0.6
2,474,348	+		DZA65_RS11590	0.49	-2.2
2,474,349	-		DZA65_RS11590	0.49	-1.2
2,474,467	+		DZA65_RS11590	0.64	+0.2
2,474,495	+		DZA65_RS11590	0.67	-0.9
2,474,495	+				+0.3
2,474,496	-		DZA65_RS11590	0.67	-1.3
2,474,663	+		DZA65_RS11590	0.88	-1.1
2,474,663	+		DZA65_RS11590	0.88	-0.9
2,474,663	+		DZA65_RS11590	0.88	-0.5
2,474,664	-		DZA65_RS11590	0.88	-1.8
2,474,664	-		DZA65_RS11590	0.88	-1.7
2,475,000	+		DZA65_RS11595	0.83	-1.6
2,475,000	+		DZA65_RS11595	0.83	-0.7
2,475,000	+		DZA65_RS11595	0.83	-0.8
2,475,001	-		DZA65_RS11595	0.84	-2.5
2,475,044	+				-0.3
2,475,044	+				-0.3
2,475,044	+				-0.3
2,475,045	-				-0.7
2,475,045	-				+0.1
2,475,045	-				-0.7
2,475,124	-				-1.0
2,475,331	+		DZA65_RS11600	0.19	-1.7
2,475,331	+		DZA65_RS11600	0.19	-0.7
2,475,331	+		DZA65_RS11600	0.19	-1.9
2,475,331	+		DZA65_RS11600	0.19	-0.9
2,475,331	+		DZA65_RS11600	0.19	+0.4
2,475,331	+				+0.3
2,475,331	+		DZA65_RS11600	0.19	+0.3
2,475,332	-		DZA65_RS11600	0.19	-0.7
2,475,332	-		DZA65_RS11600	0.19	+1.3
2,475,332	-		DZA65_RS11600	0.19	+0.1
2,475,332	-		DZA65_RS11600	0.19	-0.7
2,475,332	-		DZA65_RS11600	0.19	-0.1
2,475,332	-		DZA65_RS11600	0.19	+0.5
2,475,332	-		DZA65_RS11600	0.19	-0.6
2,475,343	-		DZA65_RS11600	0.20	+0.5
2,475,562	+		DZA65_RS11600	0.39	-1.0
2,475,632	+		DZA65_RS11600	0.46	+0.5
2,475,632	+		DZA65_RS11600	0.46	-0.3
2,475,632	+				-0.3
2,475,632	+		DZA65_RS11600	0.46	-1.2
2,475,632	+		DZA65_RS11600	0.46	-0.3
2,475,633	-		DZA65_RS11600	0.46	+0.5
2,475,633	-		DZA65_RS11600	0.46	-1.9
2,475,633	-		DZA65_RS11600	0.46	-0.7
2,475,633	-		DZA65_RS11600	0.46	-0.3
2,475,768	+		DZA65_RS11600	0.58	-0.5
2,475,768	+		DZA65_RS11600	0.58	-0.9
2,475,768	+		DZA65_RS11600	0.58	+0.7
2,475,769	-		DZA65_RS11600	0.58	+0.6
2,475,769	-		DZA65_RS11600	0.58	-0.5
2,475,769	-		DZA65_RS11600	0.58	+0.3
2,475,769	-		DZA65_RS11600	0.58	+1.7
2,475,769	-		DZA65_RS11600	0.58	-1.7
2,475,769	-		DZA65_RS11600	0.58	+0.7
2,475,789	+		DZA65_RS11600	0.60	-0.4
2,475,847	+		DZA65_RS11600	0.65	-0.7
2,475,848	-		DZA65_RS11600	0.65	+0.6
2,475,848	-		DZA65_RS11600	0.65	-0.6
2,475,894	+		DZA65_RS11600	0.69	-0.8
2,475,895	-		DZA65_RS11600	0.69	-1.0
2,475,973	+		DZA65_RS11600	0.76	-0.4