Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS11095

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,349,434	+		DZA65_RS11090	0.17	-0.1
2,349,435	-		DZA65_RS11090	0.17	-0.3
2,349,470	+		DZA65_RS11090	0.21	-1.0
2,349,526	-		DZA65_RS11090	0.27	-0.0
2,349,529	-		DZA65_RS11090	0.27	+0.3
2,349,574	-		DZA65_RS11090	0.32	-0.6
2,349,681	-		DZA65_RS11090	0.43	+0.0
2,349,950	+		DZA65_RS11090	0.72	+0.3
2,349,950	+		DZA65_RS11090	0.72	-0.8
2,349,950	+		DZA65_RS11090	0.72	+0.6
2,350,000	+		DZA65_RS11090	0.77	-0.3
2,350,062	+		DZA65_RS11090	0.83	+1.0
2,350,062	+		DZA65_RS11090	0.83	-0.0
2,350,063	-		DZA65_RS11090	0.83	-0.1
2,350,218	+				-0.6
2,350,235	+				+1.3
2,350,239	+				-0.7
2,350,239	+				+1.3
2,350,243	-				-0.7
2,350,243	-				-1.1
2,350,311	+				-0.7
2,350,312	-				-0.4
2,350,329	+				-1.0
2,350,329	+				+0.5
2,350,329	+				-1.0
2,350,329	+				-0.6
2,350,329	+				-0.5
2,350,329	+				-0.5
2,350,329	+				-0.7
2,350,329	+				-0.3
2,350,329	+				-0.0
2,350,329	+				-1.3
2,350,329	+				-0.7
2,350,330	-				-1.2
2,350,330	-				-0.7
2,350,330	-				+1.3
2,350,331	+				+0.6
2,350,331	+				-0.2
2,350,331	+				+0.9
2,350,331	+				+0.1
2,350,331	+				-0.9
2,350,331	+				+0.5
2,350,331	+				+0.3
2,350,331	+				-0.4
2,350,332	-				-0.1
2,350,332	-				-0.3
2,350,332	-				-0.8
2,350,334	+				+0.3
2,350,334	+				-1.5
2,350,334	+				-0.4
2,350,372	+				+0.3
2,350,377	+				+0.2
2,350,378	-				+0.3
2,350,407	+				-1.3
2,350,408	-				-0.0
2,350,408	-				+0.1
2,350,408	-				-0.4
2,350,429	+				-0.3
2,350,429	+				-0.2
2,350,429	+				-0.1
2,350,429	+				+0.1
2,350,429	+				-0.5
2,350,429	+				-1.0
2,350,429	+				-2.0
2,350,429	+				-0.3
2,350,429	+				-3.0
2,350,429	+				-1.6
2,350,430	-				+0.6
2,350,430	-				-1.8
2,350,430	-				+1.8
2,350,431	+				-0.1
2,350,432	-				+0.9
2,350,432	-				-0.1
2,350,432	-				+1.3
2,350,443	+				+0.7
2,350,444	-				-0.4
2,350,466	-				-1.0
2,350,471	+				+0.7
2,350,510	-				+0.6
2,350,776	+		DZA65_RS11095	0.33	-0.7
2,350,777	-		DZA65_RS11095	0.33	+0.8
2,350,777	-		DZA65_RS11095	0.33	-0.6
2,350,870	+		DZA65_RS11095	0.42	+1.3
2,350,870	+		DZA65_RS11095	0.42	-1.7
2,350,870	+		DZA65_RS11095	0.42	-0.5
2,350,871	-		DZA65_RS11095	0.42	-0.7
2,350,871	-		DZA65_RS11095	0.42	-0.6
2,350,871	-		DZA65_RS11095	0.42	+0.6
2,350,955	-		DZA65_RS11095	0.50	-1.5
2,351,062	+		DZA65_RS11095	0.60	-1.3
2,351,073	+		DZA65_RS11095	0.61	-0.3
2,351,073	+		DZA65_RS11095	0.61	+0.3
2,351,073	+		DZA65_RS11095	0.61	-1.1
2,351,074	-		DZA65_RS11095	0.61	-0.4
2,351,074	-		DZA65_RS11095	0.61	-0.5
2,351,074	-		DZA65_RS11095	0.61	-0.1
2,351,078	+		DZA65_RS11095	0.62	+1.3
2,351,079	-		DZA65_RS11095	0.62	-2.3
2,351,083	+		DZA65_RS11095	0.62	-0.3
2,351,084	-		DZA65_RS11095	0.62	-1.0
2,351,143	+		DZA65_RS11095	0.68	+0.9
2,351,143	+		DZA65_RS11095	0.68	+0.2
2,351,143	+		DZA65_RS11095	0.68	-2.3
2,351,143	+		DZA65_RS11095	0.68	-1.3
2,351,144	-		DZA65_RS11095	0.68	-0.2
2,351,145	+		DZA65_RS11095	0.68	+0.6
2,351,145	+		DZA65_RS11095	0.68	+0.1
2,351,170	+		DZA65_RS11095	0.70	-0.9
2,351,170	+		DZA65_RS11095	0.70	+0.2
2,351,170	+		DZA65_RS11095	0.70	-0.1
2,351,171	-		DZA65_RS11095	0.70	-0.1
2,351,171	-		DZA65_RS11095	0.70	+1.3
2,351,171	-		DZA65_RS11095	0.70	-0.0
2,351,171	-		DZA65_RS11095	0.70	-0.7
2,351,171	-		DZA65_RS11095	0.70	+0.9
2,351,171	-		DZA65_RS11095	0.70	+0.5
2,351,292	-		DZA65_RS11095	0.82	+0.6
2,351,329	+		DZA65_RS11095	0.85	-1.1
2,351,338	+		DZA65_RS11095	0.86	+1.3
2,351,338	+		DZA65_RS11095	0.86	+0.6
2,351,338	+		DZA65_RS11095	0.86	+0.7
2,351,338	+		DZA65_RS11095	0.86	-0.5
2,351,338	+		DZA65_RS11095	0.86	+0.3
2,351,338	+		DZA65_RS11095	0.86	-2.0
2,351,339	-		DZA65_RS11095	0.86	+1.3
2,351,339	-		DZA65_RS11095	0.86	+0.3
2,351,339	-		DZA65_RS11095	0.86	+0.3
2,351,339	-		DZA65_RS11095	0.86	-0.5
2,351,339	-		DZA65_RS11095	0.86	-0.5
2,351,341	+		DZA65_RS11095	0.87	-0.7
2,351,341	+		DZA65_RS11095	0.87	-1.3
2,351,342	-		DZA65_RS11095	0.87	+1.1
2,351,479	+				-1.5
2,351,479	+				-1.2
2,351,479	+				-0.8
2,351,480	-				-0.8
2,351,544	+				+0.1
2,351,550	+				-1.0
2,351,550	+				+0.3
2,351,550	+				+0.5
2,351,550	+				-0.3
2,351,551	-				+0.3
2,351,551	-				+0.3
2,351,554	+				-1.9
2,351,555	-				-1.0
2,351,593	-				-2.9
2,351,593	-				+1.0
2,351,634	+				-1.3
2,351,645	+				+0.6
2,351,645	+				+0.1
2,351,646	-				+0.3
2,351,646	-				-1.5
2,351,646	-				+0.3
2,351,646	-				-1.0
2,351,646	-				+0.3
2,351,646	-				-0.3
2,351,811	+		DZA65_RS11100	0.18	-0.7
2,351,811	+		DZA65_RS11100	0.18	+1.3
2,351,811	+		DZA65_RS11100	0.18	-0.3
2,351,811	+		DZA65_RS11100	0.18	-1.3
2,351,811	+		DZA65_RS11100	0.18	-1.6
2,351,811	+		DZA65_RS11100	0.18	-0.1
2,351,811	+		DZA65_RS11100	0.18	+0.7
2,351,811	+		DZA65_RS11100	0.18	-0.3
2,351,811	+		DZA65_RS11100	0.18	+0.1
2,351,812	-		DZA65_RS11100	0.18	-0.3
2,351,812	-		DZA65_RS11100	0.18	-0.8
2,351,812	-		DZA65_RS11100	0.18	-1.3
2,351,812	-		DZA65_RS11100	0.18	-0.3
2,351,812	-		DZA65_RS11100	0.18	-1.0
2,351,812	-		DZA65_RS11100	0.18	-0.3
2,351,812	-		DZA65_RS11100	0.18	+1.5
2,351,814	+		DZA65_RS11100	0.18	-0.3
2,351,815	-		DZA65_RS11100	0.18	+0.1
2,351,823	+		DZA65_RS11100	0.19	-0.3
2,351,918	+		DZA65_RS11100	0.28	-0.3
2,351,918	+		DZA65_RS11100	0.28	-0.0
2,351,918	+		DZA65_RS11100	0.28	-1.9
2,351,918	+		DZA65_RS11100	0.28	-0.3
2,351,919	-		DZA65_RS11100	0.29	-0.5
2,351,919	-		DZA65_RS11100	0.29	-0.3
2,351,935	+		DZA65_RS11100	0.30	-1.1
2,351,935	+		DZA65_RS11100	0.30	+1.3
2,351,935	+		DZA65_RS11100	0.30	-1.7
2,351,936	-		DZA65_RS11100	0.30	+0.7
2,351,936	-		DZA65_RS11100	0.30	-0.4
2,351,936	-		DZA65_RS11100	0.30	+1.3
2,351,936	-		DZA65_RS11100	0.30	-1.3
2,351,950	+		DZA65_RS11100	0.32	+0.9
2,351,951	-		DZA65_RS11100	0.32	+1.3
2,351,951	-		DZA65_RS11100	0.32	+0.7
2,351,976	-		DZA65_RS11100	0.34	+0.7
2,351,995	-		DZA65_RS11100	0.36	+0.1
2,351,995	-		DZA65_RS11100	0.36	-1.7
2,352,001	-		DZA65_RS11100	0.37	+0.3
2,352,028	-		DZA65_RS11100	0.39	-1.4
2,352,099	+		DZA65_RS11100	0.47	-1.5
2,352,099	+		DZA65_RS11100	0.47	-0.2
2,352,099	+		DZA65_RS11100	0.47	-0.9
2,352,099	+		DZA65_RS11100	0.47	+0.3
2,352,099	+		DZA65_RS11100	0.47	+1.0
2,352,099	+		DZA65_RS11100	0.47	-1.3
2,352,099	+		DZA65_RS11100	0.47	-0.0
2,352,100	-		DZA65_RS11100	0.47	+0.7
2,352,100	-		DZA65_RS11100	0.47	+1.3
2,352,100	-		DZA65_RS11100	0.47	-0.9
2,352,100	-		DZA65_RS11100	0.47	-0.7
2,352,100	-		DZA65_RS11100	0.47	-0.0
2,352,120	+		DZA65_RS11100	0.49	-1.6
2,352,121	-		DZA65_RS11100	0.49	-1.0
2,352,145	-		DZA65_RS11100	0.51	+0.7
2,352,145	-		DZA65_RS11100	0.51	+0.1
2,352,234	+		DZA65_RS11100	0.60	+0.3
2,352,234	+		DZA65_RS11100	0.60	-1.4
2,352,234	+		DZA65_RS11100	0.60	-1.8
2,352,268	+		DZA65_RS11100	0.64	-0.9
2,352,268	+		DZA65_RS11100	0.64	+0.9
2,352,269	-		DZA65_RS11100	0.64	-1.6
2,352,269	-		DZA65_RS11100	0.64	-1.0
2,352,269	-		DZA65_RS11100	0.64	-1.1
2,352,269	-		DZA65_RS11100	0.64	-1.4
2,352,269	-		DZA65_RS11100	0.64	-0.4
2,352,269	-				+1.9
2,352,269	-		DZA65_RS11100	0.64	-0.5
2,352,269	-		DZA65_RS11100	0.64	-0.7
2,352,293	+		DZA65_RS11100	0.66	-2.0
2,352,315	+		DZA65_RS11100	0.68	-0.3
2,352,381	+		DZA65_RS11100	0.75	-1.5
2,352,382	-		DZA65_RS11100	0.75	-1.3
2,352,382	-		DZA65_RS11100	0.75	+2.3
2,352,471	+		DZA65_RS11100	0.84	-0.8
2,352,472	-		DZA65_RS11100	0.84	-1.1