Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS10740

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,272,589	+				-1.8
2,272,589	+				-2.1
2,272,589	+				-0.3
2,272,589	+				+0.3
2,272,589	+				-1.1
2,272,590	-				+0.6
2,272,594	+				-0.8
2,272,594	+				-0.2
2,272,594	+				-0.7
2,272,594	+				-1.2
2,272,594	+				-0.2
2,272,594	+				+0.5
2,272,594	+				-0.2
2,272,594	+				-1.0
2,272,594	+				-0.4
2,272,594	+				-0.7
2,272,595	-				-1.5
2,272,595	-				+1.2
2,272,595	-				-1.0
2,272,595	-				-1.8
2,272,595	-				+0.0
2,272,595	-				+0.3
2,272,610	+				-0.7
2,272,610	+				-1.2
2,272,610	+				-0.3
2,272,611	-				-0.7
2,272,611	-				-0.5
2,272,620	+				-2.1
2,272,620	+				-0.7
2,272,620	+				+0.3
2,272,620	+				+0.3
2,272,621	-				-0.8
2,272,621	-				-0.2
2,272,621	-				-0.4
2,272,621	-				-0.4
2,272,621	-				-0.2
2,272,621	-				-0.7
2,272,621	-				-0.5
2,272,624	+				-0.2
2,272,624	+				-1.4
2,272,624	+				-2.4
2,272,625	-				-1.2
2,272,625	-				-0.3
2,272,625	-				+0.3
2,272,663	+				-0.2
2,272,663	+				-1.0
2,272,664	-				+0.2
2,272,664	-				-0.2
2,272,667	+				-0.1
2,272,705	+				+1.1
2,272,709	-				-0.2
2,272,801	+		DZA65_RS10735	0.15	+0.8
2,272,801	+		DZA65_RS10735	0.15	-0.3
2,272,802	-		DZA65_RS10735	0.15	-1.2
2,272,802	-		DZA65_RS10735	0.15	-0.2
2,272,802	-		DZA65_RS10735	0.15	+0.1
2,272,803	+		DZA65_RS10735	0.15	-1.8
2,272,803	+		DZA65_RS10735	0.15	-0.5
2,272,867	-		DZA65_RS10735	0.24	-0.3
2,272,890	+		DZA65_RS10735	0.27	-0.7
2,272,893	+		DZA65_RS10735	0.27	+0.3
2,272,893	+		DZA65_RS10735	0.27	-1.2
2,272,894	-		DZA65_RS10735	0.27	-2.0
2,272,894	-		DZA65_RS10735	0.27	-2.0
2,272,894	-		DZA65_RS10735	0.27	+0.7
2,272,935	+		DZA65_RS10735	0.33	-1.1
2,272,935	+		DZA65_RS10735	0.33	+0.8
2,272,936	-		DZA65_RS10735	0.33	-0.7
2,272,938	+		DZA65_RS10735	0.33	+0.3
2,272,938	+		DZA65_RS10735	0.33	-0.5
2,272,938	+		DZA65_RS10735	0.33	+2.1
2,272,938	+		DZA65_RS10735	0.33	-0.6
2,272,939	-		DZA65_RS10735	0.33	-1.6
2,272,939	-		DZA65_RS10735	0.33	-1.8
2,272,939	-		DZA65_RS10735	0.33	-1.7
2,272,939	-		DZA65_RS10735	0.33	-1.5
2,272,939	-		DZA65_RS10735	0.33	+0.8
2,272,939	-		DZA65_RS10735	0.33	+0.8
2,273,037	+		DZA65_RS10735	0.46	-2.4
2,273,121	+		DZA65_RS10735	0.58	-0.5
2,273,121	+		DZA65_RS10735	0.58	-0.4
2,273,127	+		DZA65_RS10735	0.58	+0.0
2,273,167	+		DZA65_RS10735	0.64	-0.8
2,273,202	+		DZA65_RS10735	0.69	+0.8
2,273,202	+		DZA65_RS10735	0.69	+0.1
2,273,205	+		DZA65_RS10735	0.69	+0.3
2,273,205	+		DZA65_RS10735	0.69	+0.7
2,273,205	+		DZA65_RS10735	0.69	-1.8
2,273,205	+		DZA65_RS10735	0.69	+1.3
2,273,205	+		DZA65_RS10735	0.69	-1.5
2,273,205	+		DZA65_RS10735	0.69	+0.3
2,273,206	-		DZA65_RS10735	0.69	-0.7
2,273,206	-		DZA65_RS10735	0.69	-2.5
2,273,206	-		DZA65_RS10735	0.69	-2.7
2,273,206	-		DZA65_RS10735	0.69	-1.1
2,273,206	-		DZA65_RS10735	0.69	+1.0
2,273,206	-		DZA65_RS10735	0.69	-2.0
2,273,206	-		DZA65_RS10735	0.69	-0.2
2,273,206	-		DZA65_RS10735	0.69	-0.8
2,273,206	-		DZA65_RS10735	0.69	+0.2
2,273,208	+		DZA65_RS10735	0.69	+0.2
2,273,208	+		DZA65_RS10735	0.69	-0.6
2,273,209	-		DZA65_RS10735	0.69	+0.1
2,273,209	-		DZA65_RS10735	0.69	+0.6
2,273,209	-				-0.2
2,273,209	-		DZA65_RS10735	0.69	+1.9
2,273,253	+		DZA65_RS10735	0.75	-2.2
2,273,253	+		DZA65_RS10735	0.75	-0.4
2,273,280	+		DZA65_RS10735	0.79	+0.7
2,273,280	+		DZA65_RS10735	0.79	+1.3
2,273,280	+		DZA65_RS10735	0.79	-1.0
2,273,343	+		DZA65_RS10735	0.88	-0.1
2,273,343	+		DZA65_RS10735	0.88	-0.9
2,273,344	-		DZA65_RS10735	0.88	+0.3
2,273,344	-		DZA65_RS10735	0.88	+1.0
2,273,366	+				-1.2
2,273,366	+				-0.5
2,273,367	-				+0.6
2,273,378	+				+1.9
2,273,379	-				-0.2
2,273,379	-				-0.1
2,273,395	-				-0.1
2,273,397	-				+1.8
2,273,424	+				-2.0
2,273,424	+				+0.3
2,273,425	-				-1.4
2,273,425	-				-1.0
2,273,425	-				+1.3
2,273,433	+				+0.8
2,273,433	+				-0.2
2,273,433	+				+0.5
2,273,434	-				+0.8
2,273,434	-				+1.0
2,273,434	-				+0.6
2,273,434	-				+0.8
2,273,491	+				+0.5
2,273,492	-				-0.8
2,273,502	+				-0.2
2,273,502	+				-0.5
2,273,524	+				-0.9
2,273,533	+				-1.1
2,273,546	+				+0.5
2,273,546	+				-1.4
2,273,546	+				+0.0
2,273,546	+				-0.2
2,273,547	-				-0.4
2,273,547	-				+0.0
2,273,563	+				-1.7
2,273,563	+				-0.7
2,273,563	+				-0.7
2,273,566	+				-1.7
2,273,566	+				-1.1
2,273,566	+				-1.0
2,273,595	-				+0.8
2,273,697	-		DZA65_RS10740	0.17	+0.6
2,273,772	+		DZA65_RS10740	0.26	-0.7
2,273,772	+		DZA65_RS10740	0.26	-1.8
2,273,773	-		DZA65_RS10740	0.26	-0.2
2,273,773	-		DZA65_RS10740	0.26	-0.8
2,273,773	-		DZA65_RS10740	0.26	-0.5
2,273,798	+		DZA65_RS10740	0.29	+0.9
2,273,798	+		DZA65_RS10740	0.29	-1.0
2,273,798	+				+0.8
2,273,837	+		DZA65_RS10740	0.34	-1.5
2,273,837	+		DZA65_RS10740	0.34	+0.1
2,273,838	-		DZA65_RS10740	0.34	-0.5
2,273,862	+		DZA65_RS10740	0.37	-0.8
2,273,862	+		DZA65_RS10740	0.37	-1.6
2,273,863	-		DZA65_RS10740	0.37	+0.0
2,273,863	-		DZA65_RS10740	0.37	-1.1
2,273,863	-		DZA65_RS10740	0.37	-0.2
2,273,863	-		DZA65_RS10740	0.37	-1.0
2,273,864	+		DZA65_RS10740	0.37	-0.7
2,273,865	-		DZA65_RS10740	0.37	-0.7
2,273,874	+		DZA65_RS10740	0.38	+0.5
2,273,875	-		DZA65_RS10740	0.38	-0.4
2,274,048	+		DZA65_RS10740	0.58	-0.7
2,274,048	+		DZA65_RS10740	0.58	-1.2
2,274,049	-		DZA65_RS10740	0.59	+0.3
2,274,049	-		DZA65_RS10740	0.59	-0.9
2,274,049	-		DZA65_RS10740	0.59	-0.7
2,274,075	+		DZA65_RS10740	0.62	-0.7
2,274,076	-		DZA65_RS10740	0.62	-0.5
2,274,123	+		DZA65_RS10740	0.67	-1.6
2,274,123	+		DZA65_RS10740	0.67	-0.5
2,274,123	+		DZA65_RS10740	0.67	-1.0
2,274,151	+		DZA65_RS10740	0.71	-0.7
2,274,152	-		DZA65_RS10740	0.71	-0.2
2,274,152	-		DZA65_RS10740	0.71	-0.4
2,274,168	-		DZA65_RS10740	0.73	-1.5
2,274,278	+		DZA65_RS10740	0.85	-0.0
2,274,347	-				+0.0
2,274,360	+				-1.5
2,274,399	+				+2.3
2,274,400	-				-0.4
2,274,400	-				-1.2
2,274,400	-				-0.4
2,274,431	-				-0.1
2,274,441	+				-1.0
2,274,441	+				-1.5
2,274,441	+				-2.1
2,274,442	-				+0.0
2,274,442	-				+0.0
2,274,442	-				+0.0
2,274,444	-				-0.2
2,274,455	+				-0.2
2,274,455	+				-0.4
2,274,455	+				-0.5
2,274,455	+				+0.3
2,274,456	-				+0.8
2,274,456	-				-0.5
2,274,456	-				-0.7
2,274,457	+				+0.3
2,274,457	+				+0.6
2,274,458	-				+0.1
2,274,466	-				+0.5
2,274,490	+				+0.0
2,274,491	-				-2.1
2,274,713	-		DZA65_RS10745	0.29	+0.1
2,274,713	-		DZA65_RS10745	0.29	+0.9
2,274,714	+		DZA65_RS10745	0.29	-1.0
2,274,714	+		DZA65_RS10745	0.29	+0.2
2,274,714	+		DZA65_RS10745	0.29	-1.0
2,274,714	+		DZA65_RS10745	0.29	-0.2
2,274,714	+		DZA65_RS10745	0.29	-0.2
2,274,714	+		DZA65_RS10745	0.29	-1.4
2,274,715	-		DZA65_RS10745	0.29	-0.1
2,274,715	-		DZA65_RS10745	0.29	+0.2
2,274,715	-		DZA65_RS10745	0.29	+0.4
2,274,715	-		DZA65_RS10745	0.29	-0.2
2,274,715	-		DZA65_RS10745	0.29	-0.7
2,274,715	-		DZA65_RS10745	0.29	+0.8
2,274,715	-		DZA65_RS10745	0.29	-0.5
2,274,790	+		DZA65_RS10745	0.37	-2.5
2,274,829	+		DZA65_RS10745	0.42	+0.3
2,274,846	+		DZA65_RS10745	0.44	-1.6
2,274,846	+		DZA65_RS10745	0.44	+0.1
2,274,846	+		DZA65_RS10745	0.44	-0.9
2,274,847	-		DZA65_RS10745	0.44	+0.3
2,274,847	-		DZA65_RS10745	0.44	+0.0
2,274,850	+		DZA65_RS10745	0.44	-0.7
2,274,850	+		DZA65_RS10745	0.44	+0.3
2,274,850	+		DZA65_RS10745	0.44	-0.7
2,274,850	+		DZA65_RS10745	0.44	-0.3
2,274,851	-		DZA65_RS10745	0.44	-0.8
2,274,851	-				-0.2
2,274,851	-		DZA65_RS10745	0.44	-0.2
2,274,851	-		DZA65_RS10745	0.44	-0.2
2,274,851	-		DZA65_RS10745	0.44	-0.7
2,274,874	-		DZA65_RS10745	0.47	+0.3
2,274,917	+		DZA65_RS10745	0.52	-1.7
2,274,918	-		DZA65_RS10745	0.52	+1.3
2,274,941	-		DZA65_RS10745	0.55	-1.0
2,275,164	-		DZA65_RS10745	0.80	+0.1
2,275,193	-		DZA65_RS10745	0.84	-0.7
2,275,304	-				+1.3
2,275,327	+				-0.1
2,275,327	+				+1.1
2,275,340	-				-0.5
2,275,340	-				+1.3
2,275,367	+				-1.2
2,275,367	+				-0.7
2,275,367	+				-1.5
2,275,368	-				-0.2
2,275,369	+				-0.5
2,275,370	-				-1.2
2,275,374	+				-0.2
2,275,374	+				+0.3
2,275,374	+				-0.8
2,275,374	+				-0.0
2,275,375	-				+0.6
2,275,395	+				-1.0
2,275,395	+				-1.7
2,275,396	-				-0.1
2,275,396	-				+0.0
2,275,396	-				+0.3