Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS10615

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,251,412	+		DZA65_RS10610	0.21	-0.7
2,251,412	+		DZA65_RS10610	0.21	-1.0
2,251,413	-		DZA65_RS10610	0.21	-1.0
2,251,413	-		DZA65_RS10610	0.21	-1.9
2,251,452	+		DZA65_RS10610	0.25	-1.4
2,251,453	-		DZA65_RS10610	0.25	+1.4
2,251,456	-		DZA65_RS10610	0.25	-1.0
2,251,619	+		DZA65_RS10610	0.44	-0.8
2,251,620	-		DZA65_RS10610	0.44	-1.0
2,251,628	+		DZA65_RS10610	0.45	+1.2
2,251,628	+		DZA65_RS10610	0.45	-2.3
2,251,682	+		DZA65_RS10610	0.51	-1.4
2,251,800	+		DZA65_RS10610	0.64	-1.7
2,251,829	-		DZA65_RS10610	0.67	-0.6
2,251,875	+		DZA65_RS10610	0.72	+0.0
2,251,876	-		DZA65_RS10610	0.72	+2.0
2,251,876	-		DZA65_RS10610	0.72	-0.8
2,251,876	-		DZA65_RS10610	0.72	+1.1
2,251,976	+		DZA65_RS10610	0.83	+0.2
2,251,976	+		DZA65_RS10610	0.83	-0.6
2,251,981	-		DZA65_RS10610	0.84	-0.2
2,252,015	+		DZA65_RS10610	0.88	-0.3
2,252,022	+		DZA65_RS10610	0.89	+0.4
2,252,023	-		DZA65_RS10610	0.89	-1.3
2,252,023	-		DZA65_RS10610	0.89	-1.3
2,252,024	+		DZA65_RS10610	0.89	-0.6
2,252,024	+		DZA65_RS10610	0.89	+1.1
2,252,024	+		DZA65_RS10610	0.89	-2.0
2,252,024	+		DZA65_RS10610	0.89	-1.6
2,252,024	+		DZA65_RS10610	0.89	+0.1
2,252,025	-		DZA65_RS10610	0.89	+0.0
2,252,025	-		DZA65_RS10610	0.89	-0.5
2,252,025	-		DZA65_RS10610	0.89	+1.4
2,252,025	-		DZA65_RS10610	0.89	+1.9
2,252,025	-		DZA65_RS10610	0.89	+0.0
2,252,025	-		DZA65_RS10610	0.89	-0.4
2,252,029	+		DZA65_RS10610	0.89	+0.1
2,252,029	+		DZA65_RS10610	0.89	-1.6
2,252,029	+		DZA65_RS10610	0.89	-0.1
2,252,030	-		DZA65_RS10610	0.89	+0.0
2,252,030	-		DZA65_RS10610	0.89	+0.2
2,252,030	-		DZA65_RS10610	0.89	+0.5
2,252,030	-		DZA65_RS10610	0.89	+0.0
2,252,030	-		DZA65_RS10610	0.89	-1.1
2,252,030	-		DZA65_RS10610	0.89	+0.4
2,252,070	-				-1.3
2,252,194	-				+1.4
2,252,261	+				-1.0
2,252,262	-				-0.2
2,252,320	+				-0.8
2,252,320	+				-0.1
2,252,320	+				-2.0
2,252,321	-				-0.2
2,252,321	-				+0.4
2,252,321	-				-2.0
2,252,321	-				-0.6
2,252,407	+				+0.2
2,252,407	+				-0.4
2,252,408	-				-1.6
2,252,408	-				-1.0
2,252,408	-				-0.8
2,252,408	-				+0.8
2,252,420	+		DZA65_RS10615	0.11	+0.0
2,252,435	+		DZA65_RS10615	0.14	+1.2
2,252,543	+		DZA65_RS10615	0.35	-0.8
2,252,732	+		DZA65_RS10615	0.72	-0.5
2,252,732	+		DZA65_RS10615	0.72	+0.2
2,252,732	+				-1.4
2,252,732	+		DZA65_RS10615	0.72	-0.0
2,252,732	+		DZA65_RS10615	0.72	-1.0
2,252,733	-		DZA65_RS10615	0.72	-1.2
2,252,733	-		DZA65_RS10615	0.72	-0.2
2,252,733	-		DZA65_RS10615	0.72	+0.9
2,252,733	-		DZA65_RS10615	0.72	+1.6
2,252,733	-		DZA65_RS10615	0.72	+1.4
2,252,733	-		DZA65_RS10615	0.72	+0.5
2,252,736	+		DZA65_RS10615	0.73	-0.0
2,252,736	+		DZA65_RS10615	0.73	+0.3
2,252,736	+		DZA65_RS10615	0.73	-0.5
2,252,737	-		DZA65_RS10615	0.73	+0.6
2,252,737	-		DZA65_RS10615	0.73	-0.5
2,252,737	-		DZA65_RS10615	0.73	+1.0
2,252,737	-		DZA65_RS10615	0.73	+0.7
2,252,773	+		DZA65_RS10615	0.80	+0.6
2,252,824	+		DZA65_RS10615	0.90	+0.0
2,252,913	+				+0.3
2,252,914	-				+0.4
2,252,920	-				-0.7
2,252,920	-				+0.2
2,252,945	+				+0.8
2,252,945	+				+0.1
2,252,949	+				-1.1
2,252,950	-				-0.2
2,252,950	-				+1.4
2,252,950	-				+0.8
2,252,950	-				+2.1
2,252,970	+				-0.6
2,252,975	+				+0.2
2,252,976	-				-1.4
2,252,977	+				-0.2
2,253,005	-				-0.8
2,253,005	-				+0.9
2,253,009	-				-0.1
2,253,018	-				-0.6
2,253,073	+				-0.5
2,253,120	+				+0.4
2,253,131	+				+0.4
2,253,131	+				-2.1
2,253,131	+				-1.0
2,253,131	+				-0.3
2,253,131	+				+0.2
2,253,208	+				-1.4
2,253,217	+				+0.4
2,253,360	-				+1.7
2,253,424	-		DZA65_RS10625	0.14	-0.2
2,253,448	+		DZA65_RS10625	0.18	-0.8
2,253,449	-		DZA65_RS10625	0.18	-1.1
2,253,493	-		DZA65_RS10625	0.25	-1.6
2,253,493	-		DZA65_RS10625	0.25	+1.1
2,253,496	+		DZA65_RS10625	0.25	-1.8
2,253,496	+		DZA65_RS10625	0.25	-0.2
2,253,497	-		DZA65_RS10625	0.25	-0.6
2,253,497	-		DZA65_RS10625	0.25	-1.1
2,253,497	-		DZA65_RS10625	0.25	-1.8
2,253,565	-		DZA65_RS10625	0.35	-1.0
2,253,589	-		DZA65_RS10625	0.39	-1.0
2,253,589	-		DZA65_RS10625	0.39	+0.0
2,253,602	+		DZA65_RS10625	0.40	-0.4
2,253,634	+		DZA65_RS10625	0.45	-0.7
2,253,634	+		DZA65_RS10625	0.45	-0.1
2,253,640	+		DZA65_RS10625	0.46	-0.4
2,253,641	-		DZA65_RS10625	0.46	-0.6
2,253,650	-		DZA65_RS10625	0.48	-0.4
2,253,727	-		DZA65_RS10625	0.59	-1.4
2,253,815	+		DZA65_RS10625	0.72	-2.0
2,253,815	+		DZA65_RS10625	0.72	-0.6
2,253,816	-		DZA65_RS10625	0.72	-1.1
2,253,846	+		DZA65_RS10625	0.76	+0.8
2,253,846	+		DZA65_RS10625	0.76	-0.6
2,253,847	-		DZA65_RS10625	0.76	+0.0