Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS10360

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,191,122	+				+0.4
2,191,122	+				+0.4
2,191,123	-				-0.6
2,191,123	-				-1.2
2,191,129	+				+0.2
2,191,129	+				+0.2
2,191,130	-				+1.4
2,191,130	-				-1.3
2,191,165	+				+1.0
2,191,177	+				-1.2
2,191,225	+				-0.2
2,191,225	+				+1.4
2,191,225	+				-0.0
2,191,225	+				-1.6
2,191,226	-				-0.3
2,191,226	-				-1.6
2,191,226	-				-0.4
2,191,227	+				+0.4
2,191,228	-				+0.5
2,191,287	-				-0.6
2,191,323	+				-0.9
2,191,323	+				+0.4
2,191,323	+				-0.6
2,191,323	+				-0.0
2,191,323	+				-0.6
2,191,324	-				-0.6
2,191,324	-				+1.0
2,191,324	-				+0.3
2,191,342	+				+1.0
2,191,342	+				-1.8
2,191,342	+				+0.5
2,191,343	-		DZA65_RS10360	0.10	-0.9
2,191,376	+		DZA65_RS10360	0.24	-1.9
2,191,376	+		DZA65_RS10360	0.24	-0.9
2,191,376	+		DZA65_RS10360	0.24	-1.3
2,191,377	-		DZA65_RS10360	0.25	-0.9
2,191,377	-		DZA65_RS10360	0.25	+0.9
2,191,391	-		DZA65_RS10360	0.31	+0.4
2,191,391	-		DZA65_RS10360	0.31	+0.1
2,191,393	+		DZA65_RS10360	0.32	-1.1
2,191,393	+		DZA65_RS10360	0.32	+0.1
2,191,393	+		DZA65_RS10360	0.32	-1.3
2,191,393	+		DZA65_RS10360	0.32	+0.1
2,191,394	-		DZA65_RS10360	0.32	+0.3
2,191,460	+		DZA65_RS10360	0.61	-2.1
2,191,460	+		DZA65_RS10360	0.61	+0.1
2,191,460	+		DZA65_RS10360	0.61	-0.2
2,191,460	+		DZA65_RS10360	0.61	-0.2
2,191,460	+		DZA65_RS10360	0.61	-1.1
2,191,460	+		DZA65_RS10360	0.61	-0.9
2,191,461	-		DZA65_RS10360	0.61	-0.2
2,191,461	-		DZA65_RS10360	0.61	-0.0
2,191,464	-		DZA65_RS10360	0.62	+0.4
2,191,464	-		DZA65_RS10360	0.62	+1.8
2,191,545	+				-1.2
2,191,560	+				-0.9
2,191,560	+				+0.8
2,191,560	+				+0.3
2,191,561	-				-1.7
2,191,561	-				-1.2
2,191,561	-				-0.3
2,191,561	-				-0.2
2,191,561	-				-0.2
2,191,561	-				-2.5
2,191,561	-				-0.7
2,191,627	+		DZA65_RS10365	0.41	-0.5
2,191,627	+		DZA65_RS10365	0.41	-2.4
2,191,630	+		DZA65_RS10365	0.43	+2.4
2,191,630	+		DZA65_RS10365	0.43	+0.8
2,191,630	+		DZA65_RS10365	0.43	+0.1
2,191,631	-		DZA65_RS10365	0.44	+0.4
2,191,643	-		DZA65_RS10365	0.52	+0.2
2,191,643	-		DZA65_RS10365	0.52	-2.1
2,191,643	-		DZA65_RS10365	0.52	-0.8
2,191,681	+		DZA65_RS10365	0.78	-1.2
2,191,681	+		DZA65_RS10365	0.78	-0.2
2,191,682	-		DZA65_RS10365	0.78	+1.0
2,191,682	-		DZA65_RS10365	0.78	-0.1
2,191,719	+				-0.6
2,191,720	-				+2.6
2,191,748	-				-0.9
2,191,756	-				-0.6
2,191,771	-				+1.4
2,191,771	-				+1.4
2,191,873	+				-0.2
2,191,874	-				-2.4
2,191,874	-				-2.7
2,191,877	+				-0.9
2,191,878	-				-1.2
2,192,028	+				-0.2
2,192,052	+				-0.8
2,192,095	-				-2.8
2,192,110	+				-0.4
2,192,139	+				-1.1
2,192,215	+				-0.2
2,192,215	+				-0.1
2,192,216	-				-0.3
2,192,227	+				-0.9
2,192,227	+				+0.0
2,192,242	-				-0.6
2,192,243	+				-0.7
2,192,344	+				-0.2
2,192,408	+				-0.5
2,192,456	+				+1.8
2,192,469	-				-0.9
2,192,497	+				-0.3
2,192,497	+				-1.2
2,192,502	+				-0.7
2,192,507	+				-0.5
2,192,531	-				-0.0
2,192,531	-				-3.2