Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS10330

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,183,902	+		DZA65_RS10320	0.71	-1.6
2,183,903	-		DZA65_RS10320	0.71	-0.9
2,183,965	+		DZA65_RS10320	0.81	-0.9
2,183,965	+		DZA65_RS10320	0.81	-0.6
2,183,966	-		DZA65_RS10320	0.82	-0.9
2,184,106	-				-0.9
2,184,120	-				-0.2
2,184,120	-				-0.4
2,184,120	-				-2.4
2,184,155	-				-0.6
2,184,155	-				-0.3
2,184,221	+		DZA65_RS10325	0.18	+1.4
2,184,242	+		DZA65_RS10325	0.22	-0.3
2,184,318	-		DZA65_RS10325	0.35	+1.1
2,184,344	+		DZA65_RS10325	0.40	+0.0
2,184,344	+		DZA65_RS10325	0.40	+0.1
2,184,510	+		DZA65_RS10325	0.70	-0.2
2,184,510	+		DZA65_RS10325	0.70	-0.2
2,184,510	+				-0.9
2,184,511	-		DZA65_RS10325	0.70	-0.7
2,184,511	-		DZA65_RS10325	0.70	+0.1
2,184,511	-		DZA65_RS10325	0.70	-0.2
2,184,511	-		DZA65_RS10325	0.70	+0.4
2,184,513	+		DZA65_RS10325	0.70	+0.2
2,184,513	+		DZA65_RS10325	0.70	+0.6
2,184,513	+		DZA65_RS10325	0.70	+0.9
2,184,513	+		DZA65_RS10325	0.70	-1.3
2,184,514	-		DZA65_RS10325	0.70	-0.6
2,184,555	-		DZA65_RS10325	0.77	-2.1
2,184,555	-		DZA65_RS10325	0.77	+0.4
2,184,561	+		DZA65_RS10325	0.79	+0.8
2,184,561	+		DZA65_RS10325	0.79	-1.2
2,184,562	-		DZA65_RS10325	0.79	-0.2
2,184,562	-		DZA65_RS10325	0.79	-0.7
2,184,562	-		DZA65_RS10325	0.79	-0.7
2,184,575	+		DZA65_RS10325	0.81	+0.2
2,184,576	-		DZA65_RS10325	0.81	-0.9
2,184,576	-		DZA65_RS10325	0.81	-0.3
2,184,576	-		DZA65_RS10325	0.81	-0.6
2,184,576	-		DZA65_RS10325	0.81	-0.8
2,184,605	+		DZA65_RS10325	0.86	-1.4
2,184,605	+		DZA65_RS10325	0.86	-0.6
2,184,632	-				+0.5
2,184,632	-				-0.6
2,184,685	+				-0.8
2,184,685	+				-0.9
2,184,686	-				-0.9
2,184,686	-				-0.9
2,184,686	-				+0.4
2,184,687	+				-0.8
2,184,687	+				-1.6
2,184,743	+				-1.5
2,184,743	+				-0.6
2,184,744	-				+1.8
2,184,770	-				-1.8
2,184,775	+				+0.3
2,184,775	+				+0.3
2,184,875	+				-0.3
2,184,915	+		DZA65_RS10330	0.15	+0.4
2,184,915	+		DZA65_RS10330	0.15	-1.6
2,185,098	+		DZA65_RS10330	0.43	+1.8
2,185,098	+		DZA65_RS10330	0.43	-1.8
2,185,099	-		DZA65_RS10330	0.44	+1.0
2,185,099	-		DZA65_RS10330	0.44	+0.2
2,185,099	-		DZA65_RS10330	0.44	+0.8
2,185,099	-		DZA65_RS10330	0.44	-0.6
2,185,099	-		DZA65_RS10330	0.44	+1.4
2,185,103	+		DZA65_RS10330	0.44	-1.8
2,185,103	+		DZA65_RS10330	0.44	-0.9
2,185,104	-		DZA65_RS10330	0.44	-0.8
2,185,104	-		DZA65_RS10330	0.44	-0.0
2,185,104	-		DZA65_RS10330	0.44	-0.2
2,185,104	-		DZA65_RS10330	0.44	+0.1
2,185,179	-		DZA65_RS10330	0.56	+1.1
2,185,184	+		DZA65_RS10330	0.57	+0.4
2,185,185	-		DZA65_RS10330	0.57	+0.4
2,185,185	-		DZA65_RS10330	0.57	+0.7
2,185,185	-		DZA65_RS10330	0.57	+0.5
2,185,262	+		DZA65_RS10330	0.69	-0.9
2,185,262	+		DZA65_RS10330	0.69	-0.8
2,185,262	+		DZA65_RS10330	0.69	+0.2
2,185,262	+		DZA65_RS10330	0.69	-2.3
2,185,263	-		DZA65_RS10330	0.69	-2.2
2,185,263	-		DZA65_RS10330	0.69	-1.8
2,185,263	-		DZA65_RS10330	0.69	+0.6
2,185,263	-		DZA65_RS10330	0.69	-0.6
2,185,263	-		DZA65_RS10330	0.69	+0.1
2,185,292	+		DZA65_RS10330	0.73	-2.1
2,185,292	+		DZA65_RS10330	0.73	+0.2
2,185,292	+		DZA65_RS10330	0.73	-2.2
2,185,292	+		DZA65_RS10330	0.73	+1.4
2,185,292	+		DZA65_RS10330	0.73	+0.2
2,185,292	+		DZA65_RS10330	0.73	-0.4
2,185,292	+		DZA65_RS10330	0.73	-0.2
2,185,292	+		DZA65_RS10330	0.73	-1.2
2,185,293	-		DZA65_RS10330	0.73	-0.5
2,185,293	-		DZA65_RS10330	0.73	-0.5
2,185,293	-		DZA65_RS10330	0.73	-0.6
2,185,293	-		DZA65_RS10330	0.73	+0.0
2,185,293	-		DZA65_RS10330	0.73	-1.6
2,185,449	-				-0.0
2,185,676	-				-0.7
2,185,682	+				-0.1
2,185,682	+				+0.7
2,185,682	+				+0.4
2,185,683	-				-0.4
2,185,738	+				-2.2
2,185,738	+				+0.2
2,185,738	+				-0.6
2,185,738	+				-1.3
2,185,738	+				-1.1
2,185,738	+				+2.0
2,185,738	+				+0.8
2,185,738	+				-0.8
2,185,738	+				-0.3
2,185,739	-				-1.7
2,185,739	-				+0.7
2,185,739	-				+1.4
2,185,739	-				-1.3
2,185,739	-				-0.0
2,185,739	-				-0.6
2,185,739	-				-0.1
2,185,739	-				+1.4
2,185,739	-				-0.6
2,185,739	-				-0.2
2,185,739	-				+0.5
2,185,739	-				-0.5
2,185,849	+		DZA65_RS10335	0.17	+0.8
2,185,850	-		DZA65_RS10335	0.17	+1.4
2,185,850	-		DZA65_RS10335	0.17	-1.8
2,185,851	+		DZA65_RS10335	0.17	-0.9
2,185,851	+		DZA65_RS10335	0.17	-0.3
2,185,851	+		DZA65_RS10335	0.17	+2.4
2,185,851	+		DZA65_RS10335	0.17	-0.3
2,185,851	+		DZA65_RS10335	0.17	-0.5
2,185,851	+		DZA65_RS10335	0.17	+0.2
2,185,851	+		DZA65_RS10335	0.17	-1.6
2,185,851	+		DZA65_RS10335	0.17	+0.6
2,185,851	+		DZA65_RS10335	0.17	-0.9
2,185,851	+		DZA65_RS10335	0.17	-0.4
2,185,851	+		DZA65_RS10335	0.17	-0.8
2,185,851	+		DZA65_RS10335	0.17	+0.4
2,185,851	+		DZA65_RS10335	0.17	-1.2
2,185,851	+		DZA65_RS10335	0.17	+0.0
2,185,852	-		DZA65_RS10335	0.17	-0.9
2,185,852	-		DZA65_RS10335	0.17	-0.9
2,185,852	-		DZA65_RS10335	0.17	-0.9
2,185,852	-		DZA65_RS10335	0.17	+0.8
2,185,852	-		DZA65_RS10335	0.17	+0.8
2,185,852	-		DZA65_RS10335	0.17	-0.0
2,185,852	-		DZA65_RS10335	0.17	+0.6
2,185,852	-		DZA65_RS10335	0.17	-0.8
2,185,852	-		DZA65_RS10335	0.17	-0.6
2,185,852	-		DZA65_RS10335	0.17	-0.4
2,185,852	-		DZA65_RS10335	0.17	+0.4
2,185,852	-		DZA65_RS10335	0.17	-0.2
2,185,852	-		DZA65_RS10335	0.17	+0.2
2,185,852	-		DZA65_RS10335	0.17	-0.1
2,185,852	-		DZA65_RS10335	0.17	-1.6
2,185,852	-		DZA65_RS10335	0.17	-0.3
2,185,852	-		DZA65_RS10335	0.17	-0.4
2,185,852	-		DZA65_RS10335	0.17	-0.4
2,185,852	-				-0.9
2,185,929	+		DZA65_RS10335	0.23	-0.2
2,185,929	+		DZA65_RS10335	0.23	-1.5
2,185,930	-		DZA65_RS10335	0.24	-0.6
2,185,930	-		DZA65_RS10335	0.24	+0.7
2,185,930	-		DZA65_RS10335	0.24	-1.6
2,186,106	+		DZA65_RS10335	0.38	+1.4
2,186,107	-		DZA65_RS10335	0.38	+0.3
2,186,107	-		DZA65_RS10335	0.38	-0.2
2,186,107	-		DZA65_RS10335	0.38	-0.9
2,186,107	-		DZA65_RS10335	0.38	+1.0
2,186,107	-		DZA65_RS10335	0.38	+0.7
2,186,107	-		DZA65_RS10335	0.38	+0.4
2,186,107	-				+0.4
2,186,107	-		DZA65_RS10335	0.38	+1.1
2,186,107	-		DZA65_RS10335	0.38	+0.9
2,186,107	-		DZA65_RS10335	0.38	-1.1
2,186,107	-		DZA65_RS10335	0.38	-0.2
2,186,155	+		DZA65_RS10335	0.42	-1.1
2,186,155	+		DZA65_RS10335	0.42	+0.4
2,186,156	-		DZA65_RS10335	0.42	-1.2
2,186,156	-		DZA65_RS10335	0.42	-1.8
2,186,178	-		DZA65_RS10335	0.44	-0.5
2,186,193	+		DZA65_RS10335	0.45	+0.2
2,186,214	+		DZA65_RS10335	0.47	-0.0
2,186,214	+		DZA65_RS10335	0.47	-0.6
2,186,214	+		DZA65_RS10335	0.47	-0.2
2,186,214	+		DZA65_RS10335	0.47	+0.0
2,186,214	+		DZA65_RS10335	0.47	+0.1
2,186,215	-		DZA65_RS10335	0.47	-0.8
2,186,215	-		DZA65_RS10335	0.47	-0.6
2,186,215	-		DZA65_RS10335	0.47	+0.4
2,186,215	-		DZA65_RS10335	0.47	+1.1
2,186,278	+		DZA65_RS10335	0.52	+1.0
2,186,278	+		DZA65_RS10335	0.52	-0.0
2,186,279	-		DZA65_RS10335	0.52	-0.7
2,186,370	+		DZA65_RS10335	0.60	-0.1
2,186,370	+		DZA65_RS10335	0.60	-0.8
2,186,370	+		DZA65_RS10335	0.60	-0.8
2,186,371	-		DZA65_RS10335	0.60	-0.1
2,186,371	-		DZA65_RS10335	0.60	-0.6
2,186,371	-		DZA65_RS10335	0.60	+0.4
2,186,371	-		DZA65_RS10335	0.60	-0.7
2,186,432	+		DZA65_RS10335	0.65	-0.0
2,186,433	-		DZA65_RS10335	0.65	-1.2
2,186,433	-		DZA65_RS10335	0.65	-0.2