Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS10290

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,177,549	+				+0.4
2,177,549	+		DZA65_RS10285	0.15	-1.2
2,177,818	-				+0.4
2,177,858	-		DZA65_RS10285	0.48	-0.9
2,178,053	-		DZA65_RS10285	0.68	-1.3
2,178,068	+		DZA65_RS10285	0.70	-0.9
2,178,069	-		DZA65_RS10285	0.70	+0.0
2,178,069	-		DZA65_RS10285	0.70	-1.8
2,178,296	+				-0.4
2,178,296	+				-0.2
2,178,296	+				-0.6
2,178,296	+				-0.4
2,178,297	-				-1.2
2,178,297	-				+0.4
2,178,297	-				+0.8
2,178,297	-				-0.1
2,178,346	+				+1.4
2,178,347	-				-1.1
2,178,347	-				+0.8
2,178,357	+				-0.2
2,178,408	+				-1.6
2,178,408	+				-0.4
2,178,409	-				+1.4
2,178,409	-				-0.8
2,178,409	-				-0.4
2,178,453	+				+1.0
2,178,453	+				-1.4
2,178,453	+				+0.8
2,178,453	+				-0.3
2,178,453	+				+0.8
2,178,453	+				-1.6
2,178,453	+				-0.9
2,178,453	+				-2.1
2,178,453	+				-0.9
2,178,453	+				-0.6
2,178,453	+				+0.1
2,178,453	+				-0.9
2,178,453	+				-0.4
2,178,454	-				-1.4
2,178,454	-				+0.1
2,178,458	+				+0.4
2,178,459	-				-0.3
2,178,633	+		DZA65_RS10290	0.19	-0.8
2,178,634	-				+0.4
2,178,634	-		DZA65_RS10290	0.19	+0.4
2,178,634	-		DZA65_RS10290	0.19	-2.2
2,178,634	-		DZA65_RS10290	0.19	-0.6
2,178,678	+		DZA65_RS10290	0.24	+0.4
2,178,678	+		DZA65_RS10290	0.24	-1.5
2,178,679	-		DZA65_RS10290	0.24	+0.2
2,178,679	-		DZA65_RS10290	0.24	-0.9
2,178,681	+		DZA65_RS10290	0.24	-0.5
2,178,682	-		DZA65_RS10290	0.24	-0.2
2,178,793	+		DZA65_RS10290	0.36	-0.9
2,178,793	+		DZA65_RS10290	0.36	-0.9
2,178,793	+		DZA65_RS10290	0.36	+0.2
2,178,793	+		DZA65_RS10290	0.36	-0.6
2,178,793	+		DZA65_RS10290	0.36	-0.9
2,178,793	+		DZA65_RS10290	0.36	-2.2
2,178,793	+		DZA65_RS10290	0.36	+0.0
2,178,793	+		DZA65_RS10290	0.36	+0.5
2,178,793	+		DZA65_RS10290	0.36	+1.4
2,178,794	-		DZA65_RS10290	0.36	-0.4
2,178,794	-		DZA65_RS10290	0.36	-1.2
2,178,794	-		DZA65_RS10290	0.36	-0.6
2,178,794	-		DZA65_RS10290	0.36	-0.2
2,178,794	-		DZA65_RS10290	0.36	-1.8
2,178,794	-		DZA65_RS10290	0.36	-0.9
2,178,794	-		DZA65_RS10290	0.36	-0.2
2,178,794	-		DZA65_RS10290	0.36	+0.7
2,178,795	+		DZA65_RS10290	0.36	-0.6
2,178,795	+		DZA65_RS10290	0.36	-1.8
2,178,796	-		DZA65_RS10290	0.36	-0.4
2,178,796	-		DZA65_RS10290	0.36	-0.2
2,178,796	-		DZA65_RS10290	0.36	-1.4
2,178,929	-				+2.0
2,178,933	-		DZA65_RS10290	0.51	+1.1
2,178,981	-		DZA65_RS10290	0.56	-1.4
2,178,990	+		DZA65_RS10290	0.57	-1.4
2,178,990	+		DZA65_RS10290	0.57	-0.8
2,178,990	+		DZA65_RS10290	0.57	+1.8
2,178,990	+		DZA65_RS10290	0.57	-1.5
2,178,990	+		DZA65_RS10290	0.57	-0.3
2,178,990	+		DZA65_RS10290	0.57	-0.9
2,178,991	-		DZA65_RS10290	0.57	+1.4
2,178,991	-		DZA65_RS10290	0.57	-0.6
2,178,991	-		DZA65_RS10290	0.57	-1.5
2,178,991	-		DZA65_RS10290	0.57	-1.2
2,178,991	-		DZA65_RS10290	0.57	-1.6
2,179,095	-		DZA65_RS10290	0.69	+1.7
2,179,211	-		DZA65_RS10290	0.81	-0.4
2,179,371	+				-1.4
2,179,372	-				-0.6
2,179,372	-				+1.1
2,179,399	-				-0.3
2,179,405	+				+0.7
2,179,406	-				-1.6
2,179,406	-				-1.1
2,179,409	+				+0.3
2,179,409	+				-0.9
2,179,409	+				+0.4
2,179,412	+				+0.2
2,179,412	+				+0.9
2,179,435	+				+0.5
2,179,471	-		DZA65_RS10295	0.16	+0.3
2,179,474	+				+0.1
2,179,474	+		DZA65_RS10295	0.17	-0.7
2,179,474	+		DZA65_RS10295	0.17	-0.6
2,179,475	-				+2.4
2,179,479	+		DZA65_RS10295	0.18	+0.2
2,179,479	+		DZA65_RS10295	0.18	-0.2
2,179,479	+		DZA65_RS10295	0.18	-2.2
2,179,480	-		DZA65_RS10295	0.18	-1.2
2,179,480	-		DZA65_RS10295	0.18	-0.7
2,179,483	+		DZA65_RS10295	0.19	-1.7
2,179,483	+		DZA65_RS10295	0.19	-0.3
2,179,484	-		DZA65_RS10295	0.19	+0.4
2,179,493	+		DZA65_RS10295	0.21	+0.6
2,179,495	+		DZA65_RS10295	0.22	+0.5
2,179,496	-		DZA65_RS10295	0.22	-0.9
2,179,499	+				-0.2
2,179,499	+		DZA65_RS10295	0.23	+0.9
2,179,500	-		DZA65_RS10295	0.23	+2.1
2,179,521	+		DZA65_RS10295	0.28	+0.2
2,179,521	+		DZA65_RS10295	0.28	+1.1
2,179,521	+		DZA65_RS10295	0.28	-1.6
2,179,522	-		DZA65_RS10295	0.28	+2.2
2,179,522	-		DZA65_RS10295	0.28	+0.0
2,179,522	-		DZA65_RS10295	0.28	-0.7
2,179,583	+		DZA65_RS10295	0.43	+0.4
2,179,678	+		DZA65_RS10295	0.65	-0.4
2,179,678	+		DZA65_RS10295	0.65	-0.3
2,179,679	-		DZA65_RS10295	0.65	-1.1
2,179,740	-		DZA65_RS10295	0.80	-0.6
2,179,740	-		DZA65_RS10295	0.80	-2.5
2,179,741	+		DZA65_RS10295	0.80	-0.2
2,179,741	+		DZA65_RS10295	0.80	-0.5
2,179,744	-		DZA65_RS10295	0.81	-0.0
2,179,824	-				+0.4
2,179,940	+				-1.0
2,179,957	+				-0.9
2,179,958	-				+0.3
2,179,979	-				-1.0
2,179,997	+				-1.6
2,180,012	-				-0.2
2,180,012	-				-0.9
2,180,039	-				+0.1
2,180,064	+		DZA65_RS22865	0.13	+2.7
2,180,064	+		DZA65_RS22865	0.13	+0.4
2,180,064	+		DZA65_RS22865	0.13	-1.1
2,180,122	+		DZA65_RS22865	0.26	-0.8
2,180,199	+		DZA65_RS22865	0.43	+1.4
2,180,201	+		DZA65_RS22865	0.44	-1.8
2,180,223	-		DZA65_RS22865	0.49	+0.1
2,180,367	-		DZA65_RS22865	0.81	+2.0