Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS10275

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,174,922	-		DZA65_RS10270	0.41	+0.2
2,174,922	-		DZA65_RS10270	0.41	-1.9
2,175,025	+		DZA65_RS10270	0.57	-0.5
2,175,026	-		DZA65_RS10270	0.57	-1.2
2,175,026	-		DZA65_RS10270	0.57	-0.5
2,175,026	-		DZA65_RS10270	0.57	-1.8
2,175,053	+		DZA65_RS10270	0.61	+0.2
2,175,053	+		DZA65_RS10270	0.61	+0.1
2,175,089	+		DZA65_RS10270	0.67	+0.2
2,175,089	+		DZA65_RS10270	0.67	+1.7
2,175,089	+		DZA65_RS10270	0.67	-0.6
2,175,089	+		DZA65_RS10270	0.67	-0.6
2,175,089	+		DZA65_RS10270	0.67	-1.6
2,175,089	+		DZA65_RS10270	0.67	-1.2
2,175,089	+		DZA65_RS10270	0.67	-0.2
2,175,089	+		DZA65_RS10270	0.67	-1.2
2,175,089	+		DZA65_RS10270	0.67	+0.5
2,175,089	+		DZA65_RS10270	0.67	+0.4
2,175,090	-		DZA65_RS10270	0.67	+0.7
2,175,090	-		DZA65_RS10270	0.67	-0.6
2,175,090	-		DZA65_RS10270	0.67	-0.2
2,175,090	-		DZA65_RS10270	0.67	+0.9
2,175,091	+		DZA65_RS10270	0.67	+0.4
2,175,091	+		DZA65_RS10270	0.67	+0.2
2,175,091	+		DZA65_RS10270	0.67	-0.5
2,175,092	-		DZA65_RS10270	0.67	-1.8
2,175,092	-		DZA65_RS10270	0.67	+0.2
2,175,092	-		DZA65_RS10270	0.67	-0.7
2,175,114	+		DZA65_RS10270	0.71	-0.9
2,175,114	+		DZA65_RS10270	0.71	-0.7
2,175,124	+		DZA65_RS10270	0.72	+1.7
2,175,153	-		DZA65_RS10270	0.77	-0.3
2,175,153	-		DZA65_RS10270	0.77	-0.2
2,175,196	+		DZA65_RS10270	0.84	+1.4
2,175,196	+		DZA65_RS10270	0.84	+0.2
2,175,196	+		DZA65_RS10270	0.84	+0.7
2,175,197	-		DZA65_RS10270	0.84	-0.8
2,175,197	-		DZA65_RS10270	0.84	-1.3
2,175,197	-		DZA65_RS10270	0.84	-0.4
2,175,197	-		DZA65_RS10270	0.84	-1.2
2,175,199	+		DZA65_RS10270	0.84	+0.4
2,175,199	+		DZA65_RS10270	0.84	-1.6
2,175,199	+				+2.0
2,175,200	-		DZA65_RS10270	0.84	-1.1
2,175,261	+				+0.1
2,175,261	+				-0.6
2,175,265	-				-0.0
2,175,371	-				-0.8
2,175,374	-				-2.0
2,175,379	+				-0.0
2,175,380	-				+0.8
2,175,380	-				+0.8
2,175,380	-				-1.9
2,175,380	-				-1.6
2,175,427	+				-0.8
2,175,428	-				-0.8
2,175,444	+				-0.3
2,175,445	-				-0.9
2,175,468	+				+2.0
2,175,469	-				-0.8
2,175,476	-				-1.8
2,175,476	-				-0.9
2,175,613	+				+1.7
2,175,613	+				+1.8
2,175,627	+				+0.3
2,175,627	+				-0.3
2,175,627	+				+1.1
2,175,627	+				+0.4
2,175,628	-				-2.9
2,175,629	+				+0.4
2,175,629	+				+0.2
2,175,630	-				-1.1
2,175,643	+				+0.3
2,175,644	-				-0.3
2,175,659	-				-0.7
2,175,706	-				-0.2
2,175,712	-				-0.2
2,175,712	-				-0.2
2,175,741	-				+0.7
2,175,742	+				-1.6
2,175,742	+				+0.4
2,175,746	+				-0.6
2,175,747	-				-0.9
2,175,835	-				-0.4
2,175,837	+				+0.1
2,175,838	-				-1.3
2,175,846	+				+0.4
2,175,900	+				-0.6
2,175,900	+				+0.8
2,175,900	+				+0.3
2,175,900	+				-0.2
2,175,900	+				-2.1
2,175,901	-				-1.8
2,175,901	-				+0.6
2,175,922	+		DZA65_RS10275	0.13	-2.1
2,176,065	+		DZA65_RS10275	0.36	+0.4
2,176,066	-		DZA65_RS10275	0.36	-0.9
2,176,066	-		DZA65_RS10275	0.36	+0.4
2,176,098	+		DZA65_RS10275	0.41	-0.7
2,176,098	+		DZA65_RS10275	0.41	-1.0
2,176,098	+		DZA65_RS10275	0.41	-2.1
2,176,098	+		DZA65_RS10275	0.41	-0.6
2,176,098	+		DZA65_RS10275	0.41	-0.6
2,176,098	+		DZA65_RS10275	0.41	-1.0
2,176,098	+		DZA65_RS10275	0.41	+0.6
2,176,098	+		DZA65_RS10275	0.41	-0.9
2,176,098	+		DZA65_RS10275	0.41	-0.9
2,176,098	+				+0.4
2,176,098	+		DZA65_RS10275	0.41	+1.4
2,176,098	+		DZA65_RS10275	0.41	-0.6
2,176,098	+		DZA65_RS10275	0.41	-0.2
2,176,098	+		DZA65_RS10275	0.41	-0.6
2,176,098	+		DZA65_RS10275	0.41	-0.6
2,176,098	+		DZA65_RS10275	0.41	-0.6
2,176,098	+		DZA65_RS10275	0.41	+0.4
2,176,098	+		DZA65_RS10275	0.41	+1.0
2,176,099	-		DZA65_RS10275	0.41	+1.0
2,176,099	-		DZA65_RS10275	0.41	+0.1
2,176,099	-		DZA65_RS10275	0.41	+0.4
2,176,099	-		DZA65_RS10275	0.41	-1.2
2,176,099	-		DZA65_RS10275	0.41	-0.0
2,176,099	-		DZA65_RS10275	0.41	+0.8
2,176,099	-		DZA65_RS10275	0.41	-0.8
2,176,099	-		DZA65_RS10275	0.41	-2.1
2,176,099	-		DZA65_RS10275	0.41	-0.6
2,176,099	-		DZA65_RS10275	0.41	+0.4
2,176,099	-		DZA65_RS10275	0.41	+0.7
2,176,099	-		DZA65_RS10275	0.41	+0.4
2,176,099	-		DZA65_RS10275	0.41	+0.4
2,176,293	+		DZA65_RS10275	0.73	+0.9
2,176,294	-		DZA65_RS10275	0.73	-1.3
2,176,294	-		DZA65_RS10275	0.73	-1.1
2,176,294	-		DZA65_RS10275	0.73	+0.8
2,176,326	+		DZA65_RS10275	0.78	-0.9
2,176,326	+		DZA65_RS10275	0.78	-0.9
2,176,326	+		DZA65_RS10275	0.78	+1.1
2,176,326	+		DZA65_RS10275	0.78	+1.1
2,176,327	-				+0.8
2,176,327	-		DZA65_RS10275	0.78	-1.0
2,176,327	-		DZA65_RS10275	0.78	+0.2
2,176,398	+				+0.9
2,176,399	-				+0.4
2,176,415	+				+0.1
2,176,415	+				-0.0
2,176,415	+				-1.4
2,176,504	-				-0.2
2,176,533	-				+0.4
2,176,568	+				+0.6
2,176,568	+				+2.0
2,176,568	+				-0.9
2,176,568	+				-1.3
2,176,569	-				-0.4
2,176,569	-				-2.2
2,176,569	-				+0.3
2,176,569	-				-0.9
2,176,569	-				+0.4
2,176,569	-				-0.1
2,176,570	+				+0.4
2,176,570	+				-0.7
2,176,571	-				+0.8
2,176,610	-				+0.4
2,176,744	+		DZA65_RS10280	0.13	+0.4
2,176,744	+		DZA65_RS10280	0.13	+0.4
2,176,924	+		DZA65_RS10280	0.37	-2.1
2,176,925	-		DZA65_RS10280	0.37	-1.4
2,176,976	-		DZA65_RS10280	0.44	-0.2
2,176,976	-		DZA65_RS10280	0.44	+0.8
2,177,029	-		DZA65_RS10280	0.51	-1.2
2,177,029	-		DZA65_RS10280	0.51	+0.3
2,177,055	+		DZA65_RS10280	0.54	+0.2
2,177,055	+		DZA65_RS10280	0.54	-1.2
2,177,055	+		DZA65_RS10280	0.54	-0.2
2,177,055	+		DZA65_RS10280	0.54	+0.1
2,177,055	+		DZA65_RS10280	0.54	+0.2
2,177,056	-		DZA65_RS10280	0.55	-0.6
2,177,056	-		DZA65_RS10280	0.55	+0.2
2,177,056	-		DZA65_RS10280	0.55	-0.4
2,177,056	-		DZA65_RS10280	0.55	-0.2
2,177,072	+		DZA65_RS10280	0.57	+0.4
2,177,072	+		DZA65_RS10280	0.57	-0.4
2,177,072	+		DZA65_RS10280	0.57	+2.4
2,177,072	+		DZA65_RS10280	0.57	-1.9
2,177,072	+		DZA65_RS10280	0.57	-0.6
2,177,207	+		DZA65_RS10280	0.75	-0.9
2,177,207	+		DZA65_RS10280	0.75	-0.2
2,177,207	+		DZA65_RS10280	0.75	+0.6
2,177,207	+		DZA65_RS10280	0.75	-0.5
2,177,207	+		DZA65_RS10280	0.75	-0.4
2,177,207	+		DZA65_RS10280	0.75	-0.4
2,177,207	+		DZA65_RS10280	0.75	-0.2
2,177,207	+		DZA65_RS10280	0.75	+1.8
2,177,207	+		DZA65_RS10280	0.75	-0.5
2,177,207	+		DZA65_RS10280	0.75	-0.4
2,177,208	-		DZA65_RS10280	0.75	-1.2
2,177,208	-		DZA65_RS10280	0.75	-0.7
2,177,208	-		DZA65_RS10280	0.75	-0.4
2,177,208	-		DZA65_RS10280	0.75	-0.2
2,177,208	-		DZA65_RS10280	0.75	-1.3
2,177,208	-		DZA65_RS10280	0.75	-0.3
2,177,208	-		DZA65_RS10280	0.75	-0.2
2,177,208	-		DZA65_RS10280	0.75	+1.0
2,177,208	-		DZA65_RS10280	0.75	+2.4
2,177,208	-		DZA65_RS10280	0.75	+0.5
2,177,209	+		DZA65_RS10280	0.75	+0.2
2,177,209	+		DZA65_RS10280	0.75	-0.6
2,177,210	-		DZA65_RS10280	0.75	+1.0
2,177,304	+		DZA65_RS10280	0.87	+0.8
2,177,304	+		DZA65_RS10280	0.87	-1.8
2,177,304	+		DZA65_RS10280	0.87	+0.4
2,177,304	+		DZA65_RS10280	0.87	-1.6
2,177,305	-		DZA65_RS10280	0.88	-1.5
2,177,305	-		DZA65_RS10280	0.88	+0.1
2,177,305	-		DZA65_RS10280	0.88	-0.9
2,177,308	+		DZA65_RS10280	0.88	+0.8
2,177,308	+		DZA65_RS10280	0.88	-1.2
2,177,308	+		DZA65_RS10280	0.88	-0.4
2,177,309	-		DZA65_RS10280	0.88	-3.1
2,177,309	-		DZA65_RS10280	0.88	-0.5
2,177,396	+				+0.0
2,177,397	-				+0.8
2,177,397	-				+0.0
2,177,408	+				+0.9
2,177,408	+				-1.8
2,177,408	+				-0.9
2,177,408	+				-1.4
2,177,409	-				-0.9
2,177,409	-				+0.7
2,177,415	+				+0.6
2,177,415	+				-1.2
2,177,415	+				-1.4
2,177,415	+				+1.4
2,177,415	+				+0.4
2,177,415	+				-0.9
2,177,416	-				+0.1
2,177,416	-				-0.4
2,177,416	-				-1.2
2,177,416	-				-2.2
2,177,416	-				-0.9
2,177,416	-				-1.4
2,177,416	-				+0.7
2,177,416	-				+0.4