Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS10080

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,133,164	+		DZA65_RS10075	0.72	-0.8
2,133,164	+		DZA65_RS10075	0.72	-0.6
2,133,164	+		DZA65_RS10075	0.72	-0.5
2,133,165	-		DZA65_RS10075	0.72	+0.0
2,133,165	-		DZA65_RS10075	0.72	-1.3
2,133,165	-		DZA65_RS10075	0.72	+0.4
2,133,195	-		DZA65_RS10075	0.74	+0.6
2,133,195	-		DZA65_RS10075	0.74	-0.5
2,133,218	+		DZA65_RS10075	0.75	-0.3
2,133,219	-		DZA65_RS10075	0.75	+0.4
2,133,390	+		DZA65_RS10075	0.84	-0.8
2,133,390	+		DZA65_RS10075	0.84	-0.6
2,133,390	+		DZA65_RS10075	0.84	+0.4
2,133,390	+		DZA65_RS10075	0.84	+0.4
2,133,390	+		DZA65_RS10075	0.84	-0.5
2,133,390	+		DZA65_RS10075	0.84	-1.6
2,133,390	+		DZA65_RS10075	0.84	+1.4
2,133,391	-		DZA65_RS10075	0.84	-0.0
2,133,391	-		DZA65_RS10075	0.84	-1.2
2,133,393	-		DZA65_RS10075	0.84	-2.2
2,133,423	+		DZA65_RS10075	0.85	+1.4
2,133,423	+				-0.6
2,133,423	+		DZA65_RS10075	0.85	+0.4
2,133,424	-		DZA65_RS10075	0.85	+0.7
2,133,424	-		DZA65_RS10075	0.85	-1.5
2,133,424	-		DZA65_RS10075	0.85	+0.8
2,133,424	-		DZA65_RS10075	0.85	+0.4
2,133,424	-		DZA65_RS10075	0.85	-0.9
2,133,424	-		DZA65_RS10075	0.85	+0.4
2,133,440	-				-0.6
2,133,501	-		DZA65_RS10075	0.89	-0.9
2,133,501	-		DZA65_RS10075	0.89	-0.2
2,133,555	-				-0.2
2,133,555	-				-0.8
2,133,555	-				-0.6
2,133,576	-				+0.3
2,133,579	+				-1.5
2,133,579	+				+0.4
2,133,602	-				-1.4
2,133,637	+				-2.9
2,133,637	+				-0.2
2,133,643	+				+0.2
2,133,643	+				+1.1
2,133,643	+				-0.4
2,133,644	-				-1.8
2,133,659	+				-0.6
2,133,666	+				-0.2
2,133,666	+				-0.2
2,133,666	+				+0.9
2,133,666	+				-0.2
2,133,667	-				-1.4
2,133,667	-				-0.8
2,133,715	-				+0.3
2,133,715	-				-0.2
2,133,726	+				-0.9
2,133,726	+				-1.4
2,133,731	+				-0.3
2,133,731	+				+1.4
2,133,732	-				+0.0
2,133,732	-				-1.2
2,133,778	+				-0.6
2,133,778	+				+0.8
2,133,778	+				-0.2
2,133,778	+				+0.7
2,133,778	+				-0.2
2,133,778	+				-1.3
2,133,778	+				-1.3
2,133,779	-				-1.2
2,133,779	-				+0.2
2,133,779	-				-0.2
2,133,779	-				-1.6
2,133,779	-				+0.1
2,133,779	-				-0.2
2,133,779	-				+0.1
2,133,779	-				-0.8
2,133,816	+				-1.5
2,133,827	+				-0.7
2,133,828	-				-0.1
2,133,835	+				-0.1
2,133,835	+				-2.9
2,133,835	+				-0.8
2,133,835	+				-1.1
2,133,835	+				+0.4
2,133,836	-				-1.6
2,133,836	-				+0.3
2,133,836	-				+0.2
2,133,841	+				+1.4
2,133,841	+				+0.2
2,133,841	+				-1.8
2,133,841	+				-2.1
2,133,841	+				-0.9
2,133,841	+				+0.3
2,133,842	-				+1.4
2,133,842	-				-0.6
2,133,857	+				-0.9
2,133,891	-				-0.6
2,133,908	-				-0.3
2,133,965	+				-0.2
2,133,979	+				-0.1
2,133,980	-				+1.8
2,133,993	+				-1.2
2,134,204	-				+2.0
2,134,204	-				+0.8
2,134,224	+				-1.4
2,134,224	+				-0.4
2,134,224	+				-1.4
2,134,225	-				+0.0
2,134,261	+		DZA65_RS10080	0.14	+0.6
2,134,262	-		DZA65_RS10080	0.14	-0.4
2,134,300	-		DZA65_RS10080	0.19	-0.9
2,134,300	-				+1.0
2,134,400	+		DZA65_RS10080	0.33	-1.4
2,134,401	-		DZA65_RS10080	0.33	-0.9
2,134,409	+		DZA65_RS10080	0.34	-0.1
2,134,409	+		DZA65_RS10080	0.34	-2.7
2,134,410	-		DZA65_RS10080	0.34	-0.9
2,134,462	+		DZA65_RS10080	0.41	-1.2
2,134,462	+		DZA65_RS10080	0.41	-1.4
2,134,462	+		DZA65_RS10080	0.41	-2.4
2,134,462	+		DZA65_RS10080	0.41	+0.7
2,134,462	+		DZA65_RS10080	0.41	+0.7
2,134,462	+		DZA65_RS10080	0.41	-0.3
2,134,462	+		DZA65_RS10080	0.41	+0.2
2,134,462	+		DZA65_RS10080	0.41	-1.8
2,134,462	+		DZA65_RS10080	0.41	-0.6
2,134,463	-		DZA65_RS10080	0.42	-0.2
2,134,463	-		DZA65_RS10080	0.42	-0.6
2,134,463	-		DZA65_RS10080	0.42	-1.2
2,134,466	+		DZA65_RS10080	0.42	-1.3
2,134,466	+		DZA65_RS10080	0.42	-1.6
2,134,466	+		DZA65_RS10080	0.42	-0.8
2,134,466	+		DZA65_RS10080	0.42	-1.5
2,134,466	+		DZA65_RS10080	0.42	-0.7
2,134,466	+		DZA65_RS10080	0.42	-0.2
2,134,467	-		DZA65_RS10080	0.42	+0.8
2,134,467	-				-0.2
2,134,467	-		DZA65_RS10080	0.42	-1.8
2,134,467	-		DZA65_RS10080	0.42	-0.2
2,134,467	-		DZA65_RS10080	0.42	-0.6
2,134,467	-		DZA65_RS10080	0.42	+1.0
2,134,543	+		DZA65_RS10080	0.53	-0.7
2,134,543	+		DZA65_RS10080	0.53	-1.7
2,134,543	+		DZA65_RS10080	0.53	-0.2
2,134,543	+		DZA65_RS10080	0.53	-0.6
2,134,544	-		DZA65_RS10080	0.53	-1.3
2,134,544	-		DZA65_RS10080	0.53	-0.3
2,134,544	-		DZA65_RS10080	0.53	+1.7
2,134,544	-		DZA65_RS10080	0.53	-0.3
2,134,544	-		DZA65_RS10080	0.53	+0.1
2,134,544	-		DZA65_RS10080	0.53	-0.5
2,134,544	-		DZA65_RS10080	0.53	-1.4
2,134,544	-		DZA65_RS10080	0.53	+0.6
2,134,678	+		DZA65_RS10080	0.71	+1.2
2,134,678	+		DZA65_RS10080	0.71	-0.2
2,134,678	+		DZA65_RS10080	0.71	-2.1
2,134,678	+		DZA65_RS10080	0.71	-1.4
2,134,678	+		DZA65_RS10080	0.71	-0.4
2,134,678	+		DZA65_RS10080	0.71	+0.8
2,134,678	+		DZA65_RS10080	0.71	-1.3
2,134,679	-		DZA65_RS10080	0.71	+0.5
2,134,679	-		DZA65_RS10080	0.71	+0.7
2,134,679	-		DZA65_RS10080	0.71	-1.6
2,134,679	-		DZA65_RS10080	0.71	+0.0
2,134,679	-		DZA65_RS10080	0.71	+0.3
2,134,679	-		DZA65_RS10080	0.71	-1.2
2,134,679	-		DZA65_RS10080	0.71	-0.6
2,134,679	-		DZA65_RS10080	0.71	-0.0
2,134,683	-		DZA65_RS10080	0.72	-2.7
2,134,708	+		DZA65_RS10080	0.75	+0.1
2,134,708	+		DZA65_RS10080	0.75	-0.4
2,134,708	+		DZA65_RS10080	0.75	+0.4
2,134,709	-		DZA65_RS10080	0.75	-0.9
2,134,833	+				-0.5
2,134,833	+				-0.6
2,134,833	+				-0.6
2,134,834	-				+1.2
2,134,834	-				-1.0
2,134,834	-				+0.1
2,134,834	-				-0.4
2,134,834	-				-1.9
2,134,834	-				-1.6
2,134,895	+				+0.8
2,134,896	-				-0.9
2,134,912	+				-0.4
2,134,914	+				-0.0
2,134,914	+				-0.2
2,134,914	+				+0.8
2,134,914	+				-1.2
2,134,914	+				-1.4
2,134,915	-				-0.4
2,134,915	-				-1.5
2,134,915	-				-1.4
2,135,002	+				-0.6
2,135,003	-				-1.2
2,135,003	-				-0.1
2,135,070	+				-0.1
2,135,075	+		DZA65_RS10085	0.10	-0.5
2,135,075	+		DZA65_RS10085	0.10	-0.6
2,135,075	+		DZA65_RS10085	0.10	-1.3
2,135,075	+		DZA65_RS10085	0.10	+0.9
2,135,076	-		DZA65_RS10085	0.10	-1.9
2,135,076	-		DZA65_RS10085	0.10	-2.1
2,135,076	-		DZA65_RS10085	0.10	-1.1
2,135,076	-		DZA65_RS10085	0.10	+1.0
2,135,152	+		DZA65_RS10085	0.15	+1.0
2,135,152	+		DZA65_RS10085	0.15	-1.4
2,135,152	+		DZA65_RS10085	0.15	-1.6
2,135,152	+		DZA65_RS10085	0.15	-0.4
2,135,152	+		DZA65_RS10085	0.15	+0.4
2,135,152	+		DZA65_RS10085	0.15	-1.3
2,135,152	+		DZA65_RS10085	0.15	-0.6
2,135,152	+		DZA65_RS10085	0.15	+0.7
2,135,152	+		DZA65_RS10085	0.15	+0.1
2,135,152	+		DZA65_RS10085	0.15	+1.4
2,135,152	+		DZA65_RS10085	0.15	-1.4
2,135,153	-		DZA65_RS10085	0.15	-0.9
2,135,153	-		DZA65_RS10085	0.15	+0.4
2,135,153	-		DZA65_RS10085	0.15	+0.1
2,135,153	-		DZA65_RS10085	0.15	-0.2
2,135,153	-		DZA65_RS10085	0.15	+0.0
2,135,153	-		DZA65_RS10085	0.15	-2.7
2,135,153	-		DZA65_RS10085	0.15	-0.3
2,135,170	+		DZA65_RS10085	0.16	-0.9
2,135,170	+		DZA65_RS10085	0.16	-0.4
2,135,192	+		DZA65_RS10085	0.18	+0.9
2,135,192	+		DZA65_RS10085	0.18	+0.2
2,135,192	+		DZA65_RS10085	0.18	-0.5
2,135,193	-		DZA65_RS10085	0.18	-0.6
2,135,193	-		DZA65_RS10085	0.18	-0.3
2,135,193	-		DZA65_RS10085	0.18	-0.5
2,135,193	-		DZA65_RS10085	0.18	+0.2
2,135,193	-		DZA65_RS10085	0.18	-0.5
2,135,200	-		DZA65_RS10085	0.18	-0.5
2,135,200	-		DZA65_RS10085	0.18	-0.6
2,135,200	-		DZA65_RS10085	0.18	+0.0
2,135,225	+		DZA65_RS10085	0.20	+0.4
2,135,225	+		DZA65_RS10085	0.20	-1.2
2,135,225	+		DZA65_RS10085	0.20	+0.3
2,135,226	-		DZA65_RS10085	0.20	-1.2
2,135,326	+		DZA65_RS10085	0.26	-0.6
2,135,327	-		DZA65_RS10085	0.26	-1.1
2,135,327	-		DZA65_RS10085	0.26	-0.7
2,135,327	-		DZA65_RS10085	0.26	-0.6
2,135,327	-		DZA65_RS10085	0.26	+0.8
2,135,379	-		DZA65_RS10085	0.29	+0.7
2,135,422	+		DZA65_RS10085	0.32	-1.4
2,135,422	+		DZA65_RS10085	0.32	-0.8
2,135,422	+		DZA65_RS10085	0.32	-0.9
2,135,423	-		DZA65_RS10085	0.32	+2.1
2,135,448	+		DZA65_RS10085	0.34	-0.2
2,135,449	-		DZA65_RS10085	0.34	+1.0
2,135,449	-		DZA65_RS10085	0.34	-1.3
2,135,622	+		DZA65_RS10085	0.45	-0.2
2,135,622	+		DZA65_RS10085	0.45	-0.2
2,135,642	+		DZA65_RS10085	0.46	-0.6
2,135,642	+		DZA65_RS10085	0.46	-3.0
2,135,642	+		DZA65_RS10085	0.46	+0.1
2,135,643	-		DZA65_RS10085	0.46	-0.6
2,135,643	-		DZA65_RS10085	0.46	+1.7
2,135,690	+		DZA65_RS10085	0.49	+0.7
2,135,690	+		DZA65_RS10085	0.49	+2.6
2,135,691	-		DZA65_RS10085	0.49	+0.1
2,135,691	-		DZA65_RS10085	0.49	-1.4
2,135,845	+		DZA65_RS10085	0.59	-0.3
2,135,845	+		DZA65_RS10085	0.59	+0.8
2,135,845	+				+1.0
2,135,845	+		DZA65_RS10085	0.59	+2.4
2,135,845	+		DZA65_RS10085	0.59	-1.5
2,135,845	+		DZA65_RS10085	0.59	-1.4
2,135,845	+		DZA65_RS10085	0.59	+1.4
2,135,845	+		DZA65_RS10085	0.59	-1.6
2,135,845	+		DZA65_RS10085	0.59	-0.7
2,135,845	+		DZA65_RS10085	0.59	-0.9
2,135,845	+		DZA65_RS10085	0.59	+0.0
2,135,845	+		DZA65_RS10085	0.59	+0.4
2,135,845	+		DZA65_RS10085	0.59	-0.9
2,135,845	+		DZA65_RS10085	0.59	+0.4
2,135,845	+		DZA65_RS10085	0.59	-1.6
2,135,846	-		DZA65_RS10085	0.59	+0.2
2,135,846	-		DZA65_RS10085	0.59	+1.4
2,135,846	-		DZA65_RS10085	0.59	-0.4
2,135,846	-		DZA65_RS10085	0.59	-0.2
2,135,846	-		DZA65_RS10085	0.59	+0.2