Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS10070

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,129,802	+		DZA65_RS10060	0.45	-1.1
2,129,803	-		DZA65_RS10060	0.45	-0.9
2,129,889	-		DZA65_RS10060	0.54	-0.2
2,129,889	-		DZA65_RS10060	0.54	-1.9
2,129,928	+		DZA65_RS10060	0.59	-2.4
2,129,954	+		DZA65_RS10060	0.61	-0.2
2,129,955	-		DZA65_RS10060	0.62	-0.9
2,130,024	-		DZA65_RS10060	0.69	-0.6
2,130,024	-		DZA65_RS10060	0.69	-1.2
2,130,280	+				-0.2
2,130,280	+				+1.4
2,130,281	-				-0.5
2,130,291	+				-0.2
2,130,292	-				-0.6
2,130,314	+				-0.2
2,130,335	+				-0.5
2,130,449	-				-0.9
2,130,535	-				-0.4
2,130,535	-				+0.1
2,130,607	-				+0.7
2,130,615	+				-1.3
2,130,616	-				-1.4
2,130,616	-				+0.1
2,130,623	-				-1.2
2,130,631	+				-0.4
2,130,652	+				-0.2
2,130,652	+				-1.2
2,130,652	+				+0.7
2,130,652	+				-0.9
2,130,653	-				-1.6
2,130,654	+				+1.4
2,130,655	-				-2.4
2,130,655	-				-1.9
2,130,664	-				-1.2
2,130,664	-				-0.9
2,130,664	-				-0.7
2,130,668	+				-0.9
2,130,668	+				-0.2
2,130,668	+				-1.4
2,130,668	+				-1.7
2,130,669	-				-0.4
2,130,669	-				-0.6
2,130,669	-				+0.1
2,130,670	+				-0.7
2,130,670	+				+0.9
2,130,703	+				+0.7
2,130,705	+				+0.3
2,130,705	+				-0.4
2,130,705	+				+0.2
2,130,705	+				-0.1
2,130,705	+				-1.0
2,130,705	+				-0.6
2,130,705	+				-0.7
2,130,705	+				-0.8
2,130,705	+				-1.0
2,130,705	+				+0.5
2,130,706	-				+1.0
2,130,706	-				-2.2
2,130,706	-				-1.4
2,130,706	-				+0.2
2,130,706	-				-0.6
2,130,706	-				-1.6
2,130,709	+				+0.0
2,130,709	+				-0.4
2,130,709	+				-0.9
2,130,709	+				+0.1
2,130,710	-				+2.7
2,130,710	-				+0.7
2,130,710	-				-1.3
2,130,710	-				-3.2
2,130,780	-				-0.1
2,131,030	+		DZA65_RS10070	0.32	-0.3
2,131,030	+		DZA65_RS10070	0.32	-0.6
2,131,030	+		DZA65_RS10070	0.32	-0.7
2,131,030	+		DZA65_RS10070	0.32	+0.2
2,131,031	-		DZA65_RS10070	0.32	+0.1
2,131,089	+		DZA65_RS10070	0.39	-1.2
2,131,089	+		DZA65_RS10070	0.39	+0.8
2,131,089	+		DZA65_RS10070	0.39	-0.9
2,131,089	+		DZA65_RS10070	0.39	-2.5
2,131,089	+		DZA65_RS10070	0.39	-0.8
2,131,089	+		DZA65_RS10070	0.39	-1.8
2,131,090	-		DZA65_RS10070	0.39	-0.2
2,131,090	-		DZA65_RS10070	0.39	-0.2
2,131,090	-		DZA65_RS10070	0.39	-1.9
2,131,090	-		DZA65_RS10070	0.39	+0.4
2,131,090	-		DZA65_RS10070	0.39	+1.0
2,131,090	-		DZA65_RS10070	0.39	+0.4
2,131,090	-		DZA65_RS10070	0.39	+1.8
2,131,093	+		DZA65_RS10070	0.39	-0.9
2,131,093	+		DZA65_RS10070	0.39	+0.2
2,131,093	+		DZA65_RS10070	0.39	-0.9
2,131,093	+		DZA65_RS10070	0.39	-0.2
2,131,093	+		DZA65_RS10070	0.39	+0.4
2,131,094	-		DZA65_RS10070	0.40	-0.9
2,131,115	-		DZA65_RS10070	0.42	+0.3
2,131,154	+		DZA65_RS10070	0.47	-0.9
2,131,233	+		DZA65_RS10070	0.56	-0.1
2,131,233	+		DZA65_RS10070	0.56	-0.5
2,131,234	-		DZA65_RS10070	0.57	-0.6
2,131,399	+		DZA65_RS10070	0.77	-1.2
2,131,399	+		DZA65_RS10070	0.77	+0.2
2,131,399	+		DZA65_RS10070	0.77	-1.3
2,131,399	+		DZA65_RS10070	0.77	-0.6
2,131,400	-		DZA65_RS10070	0.77	+0.1
2,131,400	-		DZA65_RS10070	0.77	-1.9
2,131,429	-		DZA65_RS10070	0.80	+0.4
2,131,555	+				+1.1
2,131,615	+				-1.2
2,131,615	+				+0.4
2,131,616	-				-0.2
2,131,616	-				-1.6
2,131,616	-				-0.6
2,131,616	-				-0.2
2,131,616	-				-0.2
2,131,795	+				-0.2
2,131,795	+				+1.4
2,131,796	-				-1.2
2,131,796	-				-1.6
2,131,801	-				+0.4
2,131,801	-				-1.2
2,132,142	+		DZA65_RS10075	0.20	-0.3
2,132,143	-		DZA65_RS10075	0.20	+1.4
2,132,143	-		DZA65_RS10075	0.20	-0.6
2,132,211	+		DZA65_RS10075	0.24	+0.2
2,132,211	+		DZA65_RS10075	0.24	-0.8
2,132,212	-		DZA65_RS10075	0.24	+0.4
2,132,331	+		DZA65_RS10075	0.30	-1.0
2,132,332	-		DZA65_RS10075	0.30	+0.4
2,132,332	-		DZA65_RS10075	0.30	-1.0
2,132,332	-		DZA65_RS10075	0.30	+0.3
2,132,350	-		DZA65_RS10075	0.31	-0.6