Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS09935

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,098,636	+		DZA65_RS09930	0.35	-1.0
2,098,637	-		DZA65_RS09930	0.36	-0.6
2,098,644	+		DZA65_RS09930	0.36	-2.1
2,098,698	+		DZA65_RS09930	0.40	+1.4
2,098,698	+		DZA65_RS09930	0.40	-1.9
2,098,877	+		DZA65_RS09930	0.53	-0.9
2,098,921	+		DZA65_RS09930	0.57	+1.1
2,098,924	+		DZA65_RS09930	0.57	-0.2
2,098,925	-		DZA65_RS09930	0.57	-0.8
2,098,947	+		DZA65_RS09930	0.59	+1.4
2,098,947	+		DZA65_RS09930	0.59	-1.6
2,098,947	+		DZA65_RS09930	0.59	-1.2
2,098,947	+		DZA65_RS09930	0.59	+0.8
2,098,947	+		DZA65_RS09930	0.59	-0.8
2,098,948	-		DZA65_RS09930	0.59	-0.7
2,098,948	-		DZA65_RS09930	0.59	-1.4
2,098,948	-		DZA65_RS09930	0.59	-1.6
2,098,984	+		DZA65_RS09930	0.61	+0.7
2,098,984	+		DZA65_RS09930	0.61	+1.1
2,098,984	+		DZA65_RS09930	0.61	-1.9
2,098,984	+		DZA65_RS09930	0.61	-0.4
2,098,985	-		DZA65_RS09930	0.61	+0.7
2,098,985	-		DZA65_RS09930	0.61	+0.8
2,098,985	-		DZA65_RS09930	0.61	-1.2
2,098,985	-		DZA65_RS09930	0.61	+0.4
2,098,990	+		DZA65_RS09930	0.62	-0.8
2,099,026	+		DZA65_RS09930	0.65	+0.1
2,099,026	+		DZA65_RS09930	0.65	-3.0
2,099,026	+		DZA65_RS09930	0.65	-0.9
2,099,026	+		DZA65_RS09930	0.65	+0.2
2,099,026	+		DZA65_RS09930	0.65	+0.1
2,099,026	+		DZA65_RS09930	0.65	-0.6
2,099,026	+		DZA65_RS09930	0.65	-1.4
2,099,026	+		DZA65_RS09930	0.65	+0.8
2,099,027	-		DZA65_RS09930	0.65	-0.4
2,099,027	-		DZA65_RS09930	0.65	-3.2
2,099,027	-		DZA65_RS09930	0.65	-0.2
2,099,027	-		DZA65_RS09930	0.65	-0.2
2,099,066	+		DZA65_RS09930	0.67	+1.4
2,099,066	+		DZA65_RS09930	0.67	+0.4
2,099,067	-		DZA65_RS09930	0.68	-0.6
2,099,067	-		DZA65_RS09930	0.68	-1.7
2,099,067	-		DZA65_RS09930	0.68	+0.5
2,099,067	-		DZA65_RS09930	0.68	-1.3
2,099,067	-		DZA65_RS09930	0.68	-2.3
2,099,067	-		DZA65_RS09930	0.68	-0.6
2,099,096	+		DZA65_RS09930	0.70	-0.9
2,099,096	+		DZA65_RS09930	0.70	-0.2
2,099,173	+		DZA65_RS09930	0.75	-0.9
2,099,173	+		DZA65_RS09930	0.75	-0.9
2,099,173	+		DZA65_RS09930	0.75	-0.4
2,099,173	+		DZA65_RS09930	0.75	+0.1
2,099,173	+		DZA65_RS09930	0.75	-0.7
2,099,174	-		DZA65_RS09930	0.76	+0.7
2,099,174	-		DZA65_RS09930	0.76	+1.4
2,099,174	-		DZA65_RS09930	0.76	+0.4
2,099,196	+		DZA65_RS09930	0.77	-0.1
2,099,196	+		DZA65_RS09930	0.77	-0.0
2,099,196	+		DZA65_RS09930	0.77	+0.4
2,099,197	-		DZA65_RS09930	0.77	-2.1
2,099,197	-		DZA65_RS09930	0.77	+0.0
2,099,197	-		DZA65_RS09930	0.77	-0.8
2,099,197	-		DZA65_RS09930	0.77	+0.3
2,099,206	+				+0.1
2,099,206	+		DZA65_RS09930	0.78	+0.3
2,099,206	+				-0.2
2,099,206	+		DZA65_RS09930	0.78	-0.7
2,099,206	+		DZA65_RS09930	0.78	+0.2
2,099,206	+		DZA65_RS09930	0.78	-1.1
2,099,207	-		DZA65_RS09930	0.78	-1.0
2,099,207	-		DZA65_RS09930	0.78	-0.6
2,099,207	-		DZA65_RS09930	0.78	-1.7
2,099,207	-		DZA65_RS09930	0.78	-0.6
2,099,208	+		DZA65_RS09930	0.78	-0.3
2,099,254	+		DZA65_RS09930	0.81	-1.2
2,099,254	+		DZA65_RS09930	0.81	-0.8
2,099,254	+		DZA65_RS09930	0.81	-0.4
2,099,278	-		DZA65_RS09930	0.83	-1.2
2,099,278	-		DZA65_RS09930	0.83	+0.1
2,099,329	+		DZA65_RS09930	0.87	-0.2
2,099,353	+		DZA65_RS09930	0.89	-0.1
2,099,372	-				-2.1
2,099,372	-				-1.2
2,099,372	-				-0.9
2,099,372	-				+0.4
2,099,372	-				+0.1
2,099,402	-				-0.9
2,099,402	-				+0.2
2,099,404	+				-0.3
2,099,404	+				-2.2
2,099,404	+				-0.6
2,099,404	+				+0.1
2,099,404	+				-1.8
2,099,404	+				-1.8
2,099,404	+				-1.6
2,099,405	-				-0.9
2,099,405	-				-1.4
2,099,405	-				+1.9
2,099,405	-				+0.8
2,099,479	-				-1.2
2,099,567	+				-1.4
2,099,567	+				+1.4
2,100,924	-				+0.8
2,101,084	+				+0.5
2,101,197	+				+1.4
2,101,197	+				-0.4
2,101,198	-				+2.4
2,101,198	-				+0.5
2,101,209	+				-0.9
2,101,249	+				-0.2
2,101,250	-				-0.6
2,101,250	-				-0.3
2,101,252	+				-0.8
2,101,252	+				-0.8
2,101,471	+		DZA65_RS09940	0.44	-1.5
2,101,471	+		DZA65_RS09940	0.44	-0.9
2,101,471	+		DZA65_RS09940	0.44	-0.1
2,101,471	+		DZA65_RS09940	0.44	+0.7
2,101,472	-		DZA65_RS09940	0.45	+1.0
2,101,472	-		DZA65_RS09940	0.45	-0.9
2,101,529	+		DZA65_RS09940	0.54	+0.8
2,101,529	+		DZA65_RS09940	0.54	-1.8
2,101,650	+		DZA65_RS09940	0.73	-0.2
2,101,650	+		DZA65_RS09940	0.73	-1.3
2,101,650	+		DZA65_RS09940	0.73	+0.5
2,101,651	-		DZA65_RS09940	0.74	-0.9
2,101,664	+		DZA65_RS09940	0.76	+0.5
2,101,665	-		DZA65_RS09940	0.76	+1.4
2,101,721	-		DZA65_RS09940	0.85	-1.2
2,101,721	-		DZA65_RS09940	0.85	-0.6
2,101,807	+				+0.7
2,101,808	-				-0.6
2,101,808	-				+0.2
2,101,814	+				+0.8
2,101,814	+				-2.3
2,101,836	-				+1.7