Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS08955

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,886,073	+		DZA65_RS08945	0.66	-0.3
1,886,073	+		DZA65_RS08945	0.66	-0.2
1,886,073	+		DZA65_RS08945	0.66	-1.8
1,886,073	+		DZA65_RS08945	0.66	+1.0
1,886,074	-		DZA65_RS08945	0.66	-1.4
1,886,074	-		DZA65_RS08945	0.66	-0.2
1,886,083	+		DZA65_RS08945	0.67	-1.2
1,886,083	+		DZA65_RS08945	0.67	-2.4
1,886,083	+		DZA65_RS08945	0.67	-1.4
1,886,083	+		DZA65_RS08945	0.67	-1.2
1,886,083	+		DZA65_RS08945	0.67	-0.6
1,886,084	-		DZA65_RS08945	0.67	-0.5
1,886,084	-		DZA65_RS08945	0.67	-0.9
1,886,084	-		DZA65_RS08945	0.67	-0.0
1,886,084	-		DZA65_RS08945	0.67	-3.1
1,886,152	+		DZA65_RS08945	0.77	-0.1
1,886,152	+		DZA65_RS08945	0.77	+0.2
1,886,152	+		DZA65_RS08945	0.77	-1.2
1,886,152	+		DZA65_RS08945	0.77	-0.5
1,886,153	-		DZA65_RS08945	0.77	-0.6
1,886,161	+		DZA65_RS08945	0.78	+1.4
1,886,161	+		DZA65_RS08945	0.78	+0.9
1,886,162	-		DZA65_RS08945	0.78	-0.6
1,886,162	-		DZA65_RS08945	0.78	-0.6
1,886,162	-		DZA65_RS08945	0.78	+0.4
1,886,305	+				-0.4
1,886,305	+				-1.4
1,886,305	+				-1.3
1,886,305	+				-0.4
1,886,306	-				-2.3
1,886,306	-				+2.4
1,886,306	-				+0.6
1,886,306	-				-0.6
1,886,416	+		DZA65_RS08950	0.25	-0.5
1,886,416	+		DZA65_RS08950	0.25	+1.8
1,886,469	+		DZA65_RS08950	0.37	-1.1
1,886,469	+		DZA65_RS08950	0.37	+0.4
1,886,469	+		DZA65_RS08950	0.37	+0.4
1,886,469	+		DZA65_RS08950	0.37	-0.1
1,886,470	-		DZA65_RS08950	0.38	-0.6
1,886,470	-		DZA65_RS08950	0.38	-1.9
1,886,470	-		DZA65_RS08950	0.38	-2.3
1,886,470	-		DZA65_RS08950	0.38	+0.6
1,886,472	+		DZA65_RS08950	0.38	-0.9
1,886,472	+		DZA65_RS08950	0.38	+1.4
1,886,472	+		DZA65_RS08950	0.38	+0.6
1,886,472	+		DZA65_RS08950	0.38	+1.4
1,886,472	+		DZA65_RS08950	0.38	-1.0
1,886,472	+		DZA65_RS08950	0.38	+1.0
1,886,472	+		DZA65_RS08950	0.38	-1.8
1,886,473	-		DZA65_RS08950	0.38	-0.2
1,886,473	-		DZA65_RS08950	0.38	+0.6
1,886,473	-		DZA65_RS08950	0.38	-1.8
1,886,473	-		DZA65_RS08950	0.38	-0.5
1,886,473	-		DZA65_RS08950	0.38	-1.8
1,886,473	-		DZA65_RS08950	0.38	+0.8
1,886,473	-		DZA65_RS08950	0.38	-1.4
1,886,517	+		DZA65_RS08950	0.49	-0.1
1,886,517	+		DZA65_RS08950	0.49	+0.2
1,886,517	+		DZA65_RS08950	0.49	-0.8
1,886,517	+		DZA65_RS08950	0.49	-0.1
1,886,517	+		DZA65_RS08950	0.49	-0.6
1,886,518	-		DZA65_RS08950	0.49	+0.1
1,886,518	-		DZA65_RS08950	0.49	-0.6
1,886,633	+		DZA65_RS08950	0.77	+0.1
1,886,634	-		DZA65_RS08950	0.78	-1.4
1,886,642	+		DZA65_RS08950	0.80	-1.1
1,886,670	+		DZA65_RS08950	0.86	-0.4
1,886,671	-		DZA65_RS08950	0.87	-0.2
1,886,691	-				+0.6
1,886,694	+				-0.4
1,886,695	-				-0.1
1,886,759	+				-1.6
1,886,759	+				+1.0
1,886,760	-				+2.7
1,886,766	-				-0.4
1,886,766	-				+1.4
1,886,769	-				+0.1
1,886,769	-				-0.8
1,886,769	-				-0.6
1,886,783	-				-0.6
1,886,817	+				-0.0
1,886,817	+				-0.6
1,886,817	+				+0.1
1,886,818	-				-1.6
1,886,818	-				+0.1
1,886,818	-				-0.4
1,886,818	-				+2.0
1,886,918	-		DZA65_RS08955	0.11	+0.2
1,887,000	+		DZA65_RS08955	0.33	-1.3
1,887,000	+		DZA65_RS08955	0.33	-0.2
1,887,001	-		DZA65_RS08955	0.34	-0.2
1,887,001	-		DZA65_RS08955	0.34	-2.3
1,887,032	+		DZA65_RS08955	0.42	+0.5
1,887,032	+		DZA65_RS08955	0.42	-0.6
1,887,033	-		DZA65_RS08955	0.42	+0.2
1,887,033	-		DZA65_RS08955	0.42	-0.5
1,887,033	-		DZA65_RS08955	0.42	-1.1
1,887,033	-		DZA65_RS08955	0.42	+0.1
1,887,112	+		DZA65_RS08955	0.64	+0.4
1,887,112	+		DZA65_RS08955	0.64	+1.4
1,887,112	+		DZA65_RS08955	0.64	-1.6
1,887,114	+		DZA65_RS08955	0.65	+0.1
1,887,114	+		DZA65_RS08955	0.65	-0.4
1,887,114	+		DZA65_RS08955	0.65	-0.6
1,887,114	+		DZA65_RS08955	0.65	-0.6
1,887,114	+		DZA65_RS08955	0.65	-0.4
1,887,114	+		DZA65_RS08955	0.65	-0.7
1,887,114	+		DZA65_RS08955	0.65	+1.4
1,887,114	+		DZA65_RS08955	0.65	+0.3
1,887,114	+				+1.4
1,887,115	-		DZA65_RS08955	0.65	-0.2
1,887,115	-		DZA65_RS08955	0.65	+0.4
1,887,115	-		DZA65_RS08955	0.65	-1.4
1,887,115	-		DZA65_RS08955	0.65	-0.4
1,887,115	-		DZA65_RS08955	0.65	+1.0
1,887,115	-		DZA65_RS08955	0.65	-0.6
1,887,115	-		DZA65_RS08955	0.65	+1.6
1,887,115	-		DZA65_RS08955	0.65	+0.2
1,887,115	-		DZA65_RS08955	0.65	+0.2
1,887,165	+		DZA65_RS08955	0.79	-1.3
1,887,244	-		DZA65_RS22840	0.19	-0.5
1,887,353	+		DZA65_RS22840	0.69	+0.1
1,887,464	+				+0.2
1,887,464	+				-2.6
1,887,586	+				+0.1
1,887,587	-				-0.2
1,887,587	-				-0.7
1,887,619	-				+0.3
1,887,619	-				+0.0
1,887,619	-				-1.2
1,887,619	-				-1.8
1,887,709	-				-0.3
1,887,709	-				-0.9
1,887,709	-				-0.2
1,887,776	-		DZA65_RS08960	0.12	-0.8
1,887,776	-		DZA65_RS08960	0.12	-0.3
1,888,062	+		DZA65_RS08960	0.35	-1.4
1,888,062	+		DZA65_RS08960	0.35	+0.8
1,888,063	-		DZA65_RS08960	0.35	+0.1
1,888,063	-		DZA65_RS08960	0.35	-1.2
1,888,063	-		DZA65_RS08960	0.35	-0.0
1,888,181	+		DZA65_RS08960	0.44	-0.4
1,888,181	+		DZA65_RS08960	0.44	-0.6
1,888,181	+		DZA65_RS08960	0.44	+0.2
1,888,181	+		DZA65_RS08960	0.44	-0.7
1,888,181	+		DZA65_RS08960	0.44	-0.5
1,888,182	-		DZA65_RS08960	0.44	+0.7
1,888,182	-		DZA65_RS08960	0.44	-0.2
1,888,182	-		DZA65_RS08960	0.44	-0.8
1,888,182	-		DZA65_RS08960	0.44	-0.2
1,888,199	+		DZA65_RS08960	0.45	-1.6
1,888,222	-		DZA65_RS08960	0.47	+0.1
1,888,233	+		DZA65_RS08960	0.48	-0.6
1,888,234	-		DZA65_RS08960	0.48	-1.0
1,888,234	-		DZA65_RS08960	0.48	+0.1
1,888,234	-		DZA65_RS08960	0.48	-1.5
1,888,234	-		DZA65_RS08960	0.48	-0.6