Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS08885

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,872,420	-		DZA65_RS08875	0.51	-0.6
1,872,503	+		DZA65_RS08875	0.58	-1.9
1,872,504	-		DZA65_RS08875	0.58	-0.4
1,872,664	+		DZA65_RS08875	0.70	-0.3
1,872,664	+		DZA65_RS08875	0.70	-0.9
1,872,664	+		DZA65_RS08875	0.70	-0.9
1,872,665	-		DZA65_RS08875	0.70	-0.0
1,872,665	-		DZA65_RS08875	0.70	+0.4
1,872,665	-		DZA65_RS08875	0.70	-1.2
1,872,665	-		DZA65_RS08875	0.70	-0.9
1,872,727	+		DZA65_RS08875	0.75	-1.4
1,872,727	+		DZA65_RS08875	0.75	-0.2
1,872,728	-		DZA65_RS08875	0.75	-0.1
1,872,728	-		DZA65_RS08875	0.75	-0.9
1,872,728	-		DZA65_RS08875	0.75	-0.8
1,872,728	-		DZA65_RS08875	0.75	-1.8
1,872,728	-		DZA65_RS08875	0.75	-0.4
1,872,812	-		DZA65_RS08875	0.82	-0.2
1,872,812	-		DZA65_RS08875	0.82	-0.4
1,872,879	+		DZA65_RS08875	0.87	+1.7
1,872,880	-		DZA65_RS08875	0.87	-1.2
1,872,883	+		DZA65_RS08875	0.87	+0.4
1,872,887	+		DZA65_RS08875	0.88	-1.6
1,872,911	-		DZA65_RS08875	0.89	+0.5
1,872,911	-		DZA65_RS08875	0.89	+0.3
1,872,917	-				-0.7
1,872,922	-				-0.8
1,872,922	-				+0.4
1,872,922	-				-0.2
1,872,966	+				-0.4
1,873,014	-				+0.2
1,873,036	+				+0.6
1,873,036	+				-0.6
1,873,037	-				-0.3
1,873,172	-				-1.0
1,873,274	+		DZA65_RS08880	0.88	-0.2
1,873,274	+		DZA65_RS08880	0.88	-1.4
1,873,305	+				-0.0
1,873,320	+				+0.6
1,873,371	+				-0.4
1,873,371	+				-0.0
1,873,371	+				-0.5
1,873,372	-				+0.5
1,873,409	+				-1.8
1,873,410	-				-0.2
1,873,410	-				-1.6
1,873,486	+		DZA65_RS08885	0.12	-1.4
1,873,487	-		DZA65_RS08885	0.12	-2.8
1,873,487	-		DZA65_RS08885	0.12	-1.3
1,873,487	-		DZA65_RS08885	0.12	-0.6
1,873,487	-		DZA65_RS08885	0.12	+0.8
1,873,487	-		DZA65_RS08885	0.12	-0.2
1,873,488	+		DZA65_RS08885	0.12	+1.1
1,873,488	+		DZA65_RS08885	0.12	-0.2
1,873,488	+		DZA65_RS08885	0.12	-0.7
1,873,590	-		DZA65_RS08885	0.25	-0.0
1,873,590	-		DZA65_RS08885	0.25	-0.6
1,873,609	-		DZA65_RS08885	0.27	+0.4
1,873,617	+		DZA65_RS08885	0.28	-1.0
1,873,617	+		DZA65_RS08885	0.28	-1.7
1,873,618	-		DZA65_RS08885	0.29	-1.4
1,873,653	+		DZA65_RS08885	0.33	-0.6
1,873,653	+		DZA65_RS08885	0.33	-1.2
1,873,653	+		DZA65_RS08885	0.33	+0.8
1,873,653	+		DZA65_RS08885	0.33	+0.4
1,873,654	-		DZA65_RS08885	0.33	-1.2
1,873,654	-		DZA65_RS08885	0.33	-0.5
1,873,654	-		DZA65_RS08885	0.33	-0.5
1,873,671	+		DZA65_RS08885	0.35	-0.9
1,873,671	+		DZA65_RS08885	0.35	-0.3
1,873,672	-		DZA65_RS08885	0.35	-0.2
1,873,725	-		DZA65_RS08885	0.42	+0.1
1,873,842	+		DZA65_RS08885	0.57	-0.2
1,873,842	+		DZA65_RS08885	0.57	-0.9
1,873,843	-		DZA65_RS08885	0.57	+0.7
1,873,843	-		DZA65_RS08885	0.57	-2.1
1,873,843	-		DZA65_RS08885	0.57	-1.8
1,873,843	-		DZA65_RS08885	0.57	+0.7
1,873,843	-		DZA65_RS08885	0.57	-0.7
1,873,898	+		DZA65_RS08885	0.64	-1.2
1,873,898	+				+0.4
1,873,920	+		DZA65_RS08885	0.67	+0.9
1,873,920	+		DZA65_RS08885	0.67	-0.5
1,873,921	-		DZA65_RS08885	0.67	-1.2
1,873,981	-		DZA65_RS08885	0.74	+1.1
1,874,001	+		DZA65_RS08885	0.77	-0.0
1,874,001	+		DZA65_RS08885	0.77	-1.2
1,874,002	-		DZA65_RS08885	0.77	+0.7
1,874,075	+		DZA65_RS08885	0.86	-1.0
1,874,197	-				+0.1
1,874,197	-				-2.5
1,874,237	+				-1.4
1,874,247	+				+0.2
1,874,248	-				-1.0
1,874,248	-				+0.9
1,874,248	-				+0.7
1,874,262	+				-0.4
1,874,262	+				-0.5
1,874,263	-				-2.1
1,874,263	-				-3.0
1,874,263	-				-1.0
1,874,263	-				-1.6
1,874,263	-				+0.5
1,874,391	-				+0.7
1,874,453	-				-0.4
1,874,463	+				+0.0
1,874,463	+				-1.2
1,874,464	-				-0.2
1,874,464	-				+0.4
1,874,464	-				-0.5
1,874,482	+				-1.2
1,874,482	+				-0.6
1,874,482	+				+0.2
1,874,482	+				-1.2
1,874,482	+				-0.2
1,874,483	-				-1.0
1,874,483	-				+1.4
1,874,483	-				+1.0
1,874,483	-				-2.2
1,874,505	+				+0.4
1,874,517	-				-2.2
1,874,517	-				-1.1
1,874,588	-				-1.8
1,874,847	-		DZA65_RS08895	0.18	-0.3
1,874,873	-		DZA65_RS08895	0.25	-0.9
1,874,873	-		DZA65_RS08895	0.25	-0.5
1,874,885	-		DZA65_RS08895	0.28	-0.9
1,874,963	-		DZA65_RS08895	0.51	-1.6
1,874,981	+		DZA65_RS08895	0.56	-1.6
1,874,981	+		DZA65_RS08895	0.56	-1.2
1,874,981	+		DZA65_RS08895	0.56	-0.6
1,874,982	-		DZA65_RS08895	0.56	+0.1
1,875,103	+				-0.8