Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS08865

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,868,826	+		DZA65_RS08850	0.67	+0.8
1,868,916	+		DZA65_RS08850	0.82	-0.9
1,868,916	+		DZA65_RS08850	0.82	-0.4
1,868,916	+		DZA65_RS08850	0.82	+1.4
1,868,917	-		DZA65_RS08850	0.82	-1.2
1,868,917	-		DZA65_RS08850	0.82	+0.2
1,868,917	-		DZA65_RS08850	0.82	-1.3
1,868,917	-		DZA65_RS08850	0.82	-0.5
1,869,020	+				+0.8
1,869,020	+				+0.1
1,869,021	-				+0.4
1,869,021	-				-0.7
1,869,021	-				+1.8
1,869,021	-				+0.1
1,869,066	+				-1.1
1,869,197	+		DZA65_RS08855	0.44	-0.9
1,869,231	-		DZA65_RS08855	0.60	-0.5
1,869,316	+				+0.3
1,869,327	+				-0.8
1,869,348	+				+2.4
1,869,370	+				-0.1
1,869,389	+				-0.6
1,869,390	-				-0.6
1,869,390	-				-0.7
1,869,390	-				-0.2
1,869,393	+				-1.6
1,869,393	+				-0.0
1,869,394	-				+0.7
1,869,397	+				+1.4
1,869,403	+				-0.1
1,869,403	+				-0.2
1,869,404	-				-0.4
1,869,409	-				+2.0
1,869,427	+				-1.3
1,869,428	-				-1.1
1,869,429	+				-1.1
1,869,430	-				+0.2
1,869,431	+				-1.3
1,869,431	+				-0.2
1,869,431	+				-1.4
1,869,432	-				-0.7
1,869,432	-				+0.1
1,869,432	-				-0.5
1,869,432	-				+0.2
1,869,432	-				-1.2
1,869,501	-				+0.2
1,869,511	-				-0.0
1,869,511	-				+0.7
1,869,511	-				-0.4
1,869,511	-				+1.2
1,869,558	+				-0.2
1,869,573	+				-0.6
1,869,574	-				-0.9
1,869,585	+				-0.6
1,869,636	+				-0.3
1,869,636	+				-0.2
1,869,637	-				-0.8
1,869,637	-				-0.8
1,869,637	-				+0.3
1,869,656	+				-0.9
1,869,656	+				+0.9
1,869,656	+				-0.8
1,869,657	-				-1.0
1,869,657	-				-1.3
1,869,658	+				-0.4
1,869,658	+				-2.1
1,869,658	+				-0.3
1,869,659	-				+0.2
1,869,659	-				-1.6
1,869,659	-				-0.2
1,869,659	-				-1.6
1,869,673	-				-0.2
1,869,725	+				+1.4
1,869,726	-				-0.6
1,869,728	+				+1.4
1,869,729	-				-0.0
1,869,732	+				-1.3
1,869,732	+				-0.6
1,869,733	-				-2.1
1,869,733	-				-0.4
1,869,733	-				-1.1
1,869,779	-				-0.2
1,869,808	-				-0.9
1,869,865	+		DZA65_RS08865	0.15	-0.1
1,869,876	+		DZA65_RS08865	0.16	-0.9
1,869,886	-		DZA65_RS08865	0.17	-0.2
1,869,886	-		DZA65_RS08865	0.17	+1.1
1,869,886	-		DZA65_RS08865	0.17	-0.6
1,869,892	-		DZA65_RS08865	0.18	-0.6
1,870,286	+		DZA65_RS08865	0.60	-1.8
1,870,304	-		DZA65_RS08865	0.62	+0.6
1,870,315	-		DZA65_RS08865	0.63	-0.2
1,870,332	+		DZA65_RS08865	0.65	+0.4
1,870,338	-		DZA65_RS08865	0.66	+1.0
1,870,338	-		DZA65_RS08865	0.66	-1.2
1,870,494	-		DZA65_RS08865	0.83	-0.4
1,870,727	-				-0.9
1,870,750	-				-0.9
1,870,780	-				+0.2
1,870,795	-				-2.4
1,870,901	-				+0.1
1,870,960	+				+0.1
1,871,078	+				-0.1
1,871,079	-				+0.4
1,871,138	+				-1.6
1,871,139	-				-0.9
1,871,139	-				-0.3
1,871,156	-				+0.8
1,871,202	+				-0.2
1,871,202	+				+0.7
1,871,202	+				+0.1
1,871,269	-				-1.1
1,871,269	-				-0.6
1,871,533	+		DZA65_RS08870	0.61	-0.9
1,871,533	+		DZA65_RS08870	0.61	-0.2
1,871,533	+		DZA65_RS08870	0.61	+0.7
1,871,574	+		DZA65_RS08870	0.74	-1.6
1,871,574	+		DZA65_RS08870	0.74	+1.0
1,871,574	+		DZA65_RS08870	0.74	-0.2
1,871,574	+		DZA65_RS08870	0.74	-0.1
1,871,574	+		DZA65_RS08870	0.74	-1.5
1,871,574	+		DZA65_RS08870	0.74	-1.2
1,871,574	+		DZA65_RS08870	0.74	+1.2
1,871,574	+		DZA65_RS08870	0.74	-0.4
1,871,574	+				+1.4
1,871,574	+		DZA65_RS08870	0.74	-0.6
1,871,574	+		DZA65_RS08870	0.74	-0.2
1,871,574	+		DZA65_RS08870	0.74	-0.0
1,871,574	+		DZA65_RS08870	0.74	+0.2
1,871,574	+		DZA65_RS08870	0.74	-0.1
1,871,579	-		DZA65_RS08870	0.76	-0.3
1,871,579	-		DZA65_RS08870	0.76	+0.4
1,871,579	-		DZA65_RS08870	0.76	+0.9
1,871,579	-		DZA65_RS08870	0.76	-0.6
1,871,579	-		DZA65_RS08870	0.76	-0.6
1,871,579	-		DZA65_RS08870	0.76	-1.8
1,871,579	-		DZA65_RS08870	0.76	-0.9
1,871,579	-		DZA65_RS08870	0.76	-0.8
1,871,579	-		DZA65_RS08870	0.76	-1.2