Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS08520

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,796,768	+		DZA65_RS08515	0.21	+1.9
1,796,769	-		DZA65_RS08515	0.21	+0.4
1,796,769	-		DZA65_RS08515	0.21	-2.2
1,796,769	-		DZA65_RS08515	0.21	+0.0
1,796,769	-		DZA65_RS08515	0.21	-0.2
1,796,830	+		DZA65_RS08515	0.26	-0.2
1,796,834	+		DZA65_RS08515	0.27	+0.2
1,796,834	+		DZA65_RS08515	0.27	+0.4
1,796,835	-		DZA65_RS08515	0.27	-0.3
1,796,896	+		DZA65_RS08515	0.32	+1.4
1,796,897	-		DZA65_RS08515	0.32	+1.2
1,796,947	+				+0.4
1,797,347	-		DZA65_RS08515	0.73	+1.4
1,797,652	+				-1.0
1,797,652	+				-1.0
1,797,652	+				-2.3
1,797,652	+				-1.2
1,797,652	+				+0.6
1,797,652	+				-0.2
1,797,653	-				+0.1
1,797,653	-				+0.3
1,797,653	-				-1.4
1,797,653	-				+1.4
1,797,653	-				-0.2
1,797,656	+				+0.1
1,797,656	+				-1.4
1,797,656	+				-0.8
1,797,656	+				+0.6
1,797,656	+				+0.9
1,797,656	+				-1.8
1,797,656	+				-1.6
1,797,656	+				+0.3
1,797,656	+				-0.7
1,797,656	+				-1.8
1,797,656	+				-2.0
1,797,656	+				+0.2
1,797,657	-				-1.4
1,797,657	-				+0.2
1,797,657	-				-1.0
1,797,657	-				+0.4
1,797,657	-				-0.4
1,797,657	-				-0.2
1,797,657	-				-1.6
1,797,657	-				-1.6
1,797,657	-				+0.4
1,797,675	+				+1.4
1,797,730	+				-0.3
1,797,731	-				-1.7
1,797,768	-				-0.4
1,798,372	-				-2.7
1,798,372	-				+2.4
1,798,376	-				-1.4
1,798,386	+				+0.4
1,798,386	+				-1.4
1,798,386	+				+0.6
1,798,387	-				-0.6
1,798,387	-				+0.4
1,798,387	-				-0.3
1,798,387	-				-2.5
1,798,387	-				-1.4
1,798,390	-				-0.5
1,798,390	-				+0.2
1,798,467	+				-0.3
1,798,467	+				-0.5
1,798,468	-				-0.9
1,798,468	-				-0.8
1,798,468	-				-0.7
1,798,468	-				-0.6
1,798,468	-				-1.2
1,798,468	-				+0.9
1,798,473	+				+0.4
1,798,473	+				-1.3
1,798,473	+				-1.4
1,798,474	-				-1.9
1,798,474	-				-0.0
1,798,485	+				+0.4
1,798,485	+				-0.4
1,798,485	+				-0.7
1,798,485	+				-0.6
1,798,486	-				-0.5
1,798,486	-				-0.2
1,798,486	-				-1.6
1,798,486	-				-0.2
1,798,486	-				-0.6
1,798,486	-				-0.5
1,798,486	-				+1.4
1,798,486	-				+1.2
1,798,487	+				-0.9
1,798,487	+				-0.1
1,798,487	+				-0.8
1,798,487	+				-0.4
1,798,488	-				+0.3
1,798,488	-				-0.6
1,798,488	-				-1.3
1,798,488	-				-0.2
1,798,488	-				-0.6
1,798,488	-				+0.1
1,798,488	-				-1.4
1,798,492	+				+0.4
1,798,492	+				+0.1
1,798,493	-				-2.5
1,798,493	-				+0.0
1,798,493	-				-1.6
1,798,493	-				-2.2
1,798,493	-				-0.2
1,798,496	+				-0.6
1,798,496	+				-1.4
1,798,496	+				-0.9
1,798,496	+				-1.3
1,798,497	-				-1.6
1,798,497	-				+0.4
1,798,497	-				-1.3
1,798,497	-				-0.9
1,798,497	-				-1.5
1,798,497	-				-2.9
1,798,497	-				-0.4
1,798,509	-				-1.8
1,798,531	+				+0.8
1,798,531	+				-0.8
1,798,561	-				+0.8
1,798,574	+				+1.4
1,798,574	+				-1.2
1,798,575	-				-0.6
1,798,593	+				-0.6
1,798,593	+				+0.2
1,798,649	+		DZA65_RS08525	0.11	-0.6
1,798,649	+		DZA65_RS08525	0.11	-0.9
1,798,802	+		DZA65_RS08525	0.21	-1.0
1,798,802	+		DZA65_RS08525	0.21	-1.2
1,798,803	-		DZA65_RS08525	0.21	-0.6
1,798,803	-		DZA65_RS08525	0.21	-0.3
1,798,803	-		DZA65_RS08525	0.21	-1.6
1,798,858	+		DZA65_RS08525	0.25	-1.2
1,798,858	+				+1.4
1,798,858	+		DZA65_RS08525	0.25	-1.8
1,798,859	-		DZA65_RS08525	0.25	-0.8
1,798,859	-		DZA65_RS08525	0.25	-0.9
1,798,900	-		DZA65_RS08525	0.28	-0.7
1,798,900	-		DZA65_RS08525	0.28	-2.0
1,798,900	-		DZA65_RS08525	0.28	-1.1
1,799,046	+		DZA65_RS08525	0.38	-0.6
1,799,046	+		DZA65_RS08525	0.38	+0.0
1,799,046	+		DZA65_RS08525	0.38	-0.9
1,799,046	+		DZA65_RS08525	0.38	+0.1
1,799,046	+		DZA65_RS08525	0.38	+0.1
1,799,046	+		DZA65_RS08525	0.38	+1.4
1,799,046	+		DZA65_RS08525	0.38	-0.8
1,799,046	+		DZA65_RS08525	0.38	-0.2
1,799,046	+		DZA65_RS08525	0.38	-0.0
1,799,046	+		DZA65_RS08525	0.38	-1.9
1,799,047	-		DZA65_RS08525	0.38	-2.2
1,799,047	-		DZA65_RS08525	0.38	+0.1
1,799,047	-		DZA65_RS08525	0.38	-1.3
1,799,047	-		DZA65_RS08525	0.38	-0.2
1,799,139	+		DZA65_RS08525	0.44	+1.0
1,799,140	-		DZA65_RS08525	0.44	+0.4
1,799,140	-		DZA65_RS08525	0.44	-1.9
1,799,140	-		DZA65_RS08525	0.44	+0.0
1,799,171	-		DZA65_RS08525	0.46	-2.0
1,799,222	-		DZA65_RS08525	0.50	+0.1
1,799,222	-		DZA65_RS08525	0.50	-1.2
1,799,222	-		DZA65_RS08525	0.50	-0.9
1,799,296	+		DZA65_RS08525	0.55	+0.3