Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS08505

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,791,735	+		DZA65_RS08500	0.36	+0.9
1,791,736	-		DZA65_RS08500	0.36	-1.9
1,791,736	-		DZA65_RS08500	0.36	+2.4
1,791,736	-		DZA65_RS08500	0.36	+0.5
1,791,980	+		DZA65_RS08500	0.54	-0.4
1,791,980	+		DZA65_RS08500	0.54	-0.6
1,792,007	+		DZA65_RS08500	0.56	+0.1
1,792,008	-		DZA65_RS08500	0.56	-0.6
1,792,141	+		DZA65_RS08500	0.67	-0.5
1,792,228	+				-0.2
1,792,229	-		DZA65_RS08500	0.73	-1.0
1,792,441	+		DZA65_RS08500	0.90	+0.9
1,792,442	-		DZA65_RS08500	0.90	-0.3
1,792,454	+				-0.8
1,792,556	+				-1.5
1,792,556	+				-1.3
1,792,556	+				+0.3
1,792,556	+				-0.9
1,792,557	-				-0.9
1,792,557	-				-0.2
1,792,591	+				-1.4
1,792,591	+				+1.0
1,792,596	+				-1.2
1,792,596	+				-1.3
1,792,596	+				-1.8
1,792,618	+				+0.2
1,792,619	-				-1.2
1,792,649	+				+0.1
1,792,650	-				-1.8
1,792,678	+				-0.4
1,792,679	-				+0.2
1,792,693	+				-0.6
1,792,700	+				-0.5
1,792,700	+				+0.8
1,792,701	-				-0.9
1,792,845	+		DZA65_RS08505	0.27	-0.8
1,792,845	+		DZA65_RS08505	0.27	-0.9
1,792,845	+		DZA65_RS08505	0.27	-1.0
1,792,845	+		DZA65_RS08505	0.27	-0.6
1,792,846	-		DZA65_RS08505	0.27	-0.6
1,792,846	-		DZA65_RS08505	0.27	+0.1
1,792,846	-		DZA65_RS08505	0.27	-0.2
1,792,846	-		DZA65_RS08505	0.27	-0.8
1,792,846	-		DZA65_RS08505	0.27	+0.6
1,792,864	+		DZA65_RS08505	0.30	-0.4
1,792,865	-		DZA65_RS08505	0.30	-0.2
1,792,865	-		DZA65_RS08505	0.30	+0.8
1,792,943	+		DZA65_RS08505	0.39	+0.0
1,792,943	+		DZA65_RS08505	0.39	+1.1
1,792,943	+		DZA65_RS08505	0.39	+0.0
1,792,943	+		DZA65_RS08505	0.39	+0.8
1,792,944	-		DZA65_RS08505	0.40	-1.2
1,792,944	-		DZA65_RS08505	0.40	-0.7
1,792,999	-		DZA65_RS08505	0.46	-0.4
1,793,010	+		DZA65_RS08505	0.48	-0.1
1,793,010	+		DZA65_RS08505	0.48	+2.3
1,793,010	+		DZA65_RS08505	0.48	-1.8
1,793,010	+		DZA65_RS08505	0.48	-0.2
1,793,010	+		DZA65_RS08505	0.48	+0.4
1,793,096	+		DZA65_RS08505	0.58	-1.2
1,793,096	+		DZA65_RS08505	0.58	-0.3
1,793,097	-		DZA65_RS08505	0.58	-2.8
1,793,097	-		DZA65_RS08505	0.58	+0.8
1,793,111	-		DZA65_RS08505	0.60	-0.9
1,793,201	-		DZA65_RS08505	0.71	+1.4
1,793,204	+		DZA65_RS08505	0.72	+0.4
1,793,205	-		DZA65_RS08505	0.72	+1.0
1,793,212	+		DZA65_RS08505	0.73	-0.2
1,793,213	-		DZA65_RS08505	0.73	-1.2
1,793,253	-		DZA65_RS08505	0.78	-0.9
1,793,384	+				+0.2
1,793,384	+				-1.7
1,793,384	+				-0.3
1,793,431	+				-0.4
1,793,434	+				-1.9
1,793,434	+				-0.2
1,793,434	+				+0.6
1,793,434	+				-1.6
1,793,434	+				-0.6
1,793,435	-				+0.4
1,793,435	-				+1.1
1,793,435	-				-0.6
1,793,435	-				-1.8
1,793,435	-				-0.4
1,793,457	+				-0.7
1,793,457	+				+1.3
1,793,457	+				+0.0
1,793,458	-				+0.1
1,793,515	+				-0.6
1,793,515	+				+1.4
1,793,515	+				-1.4
1,793,515	+				-1.2
1,793,515	+				+1.0
1,793,515	+				-0.9
1,793,515	+				-0.4
1,793,515	+				-0.5
1,793,515	+				-0.1
1,793,515	+				-1.6
1,793,515	+				-0.9
1,793,515	+				-2.6
1,793,516	-				+0.7
1,793,516	-				-0.2
1,793,516	-				-2.0
1,793,516	-				+0.7
1,793,516	-				+1.3
1,793,516	-				+0.8
1,793,578	+				+0.1
1,793,578	+				-0.2
1,793,578	+				-0.8
1,793,578	+				+1.4
1,793,579	-				-0.9
1,793,579	-				-0.1
1,793,670	+				+1.4
1,793,670	+				-1.9
1,793,670	+				-2.7
1,793,671	-				-0.3
1,793,671	-				-0.4
1,793,671	-				-0.7
1,793,987	+		DZA65_RS08510	0.17	-1.6
1,793,987	+		DZA65_RS08510	0.17	-0.9
1,793,988	-		DZA65_RS08510	0.17	-0.4
1,793,988	-		DZA65_RS08510	0.17	-2.2
1,794,155	+		DZA65_RS08510	0.22	-1.0
1,794,156	-		DZA65_RS08510	0.22	-1.4
1,794,218	+		DZA65_RS08510	0.24	-2.2
1,794,218	+		DZA65_RS08510	0.24	-1.0
1,794,218	+		DZA65_RS08510	0.24	-0.2
1,794,219	-		DZA65_RS08510	0.24	-1.3
1,794,219	-		DZA65_RS08510	0.24	+1.1
1,794,300	+		DZA65_RS08510	0.27	-0.9
1,794,301	-		DZA65_RS08510	0.27	-1.4
1,794,308	+		DZA65_RS08510	0.27	-1.6
1,794,315	+		DZA65_RS08510	0.27	-0.4
1,794,348	+		DZA65_RS08510	0.28	-0.3
1,794,348	+		DZA65_RS08510	0.28	-1.0
1,794,379	-		DZA65_RS08510	0.29	-2.0