Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS08435

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,779,314	+		DZA65_RS08425	0.61	-0.7
1,779,314	+		DZA65_RS08425	0.61	-0.9
1,779,315	-		DZA65_RS08425	0.62	+0.0
1,779,494	+				-0.6
1,779,494	+				+0.4
1,779,839	+		DZA65_RS08430	0.50	-0.2
1,779,839	+		DZA65_RS08430	0.50	+0.1
1,779,995	+		DZA65_RS08430	0.69	+0.5
1,779,996	-		DZA65_RS08430	0.69	-0.9
1,779,996	-		DZA65_RS08430	0.69	-0.6
1,780,160	+		DZA65_RS08430	0.88	+0.3
1,780,160	+		DZA65_RS08430	0.88	-0.3
1,780,160	+		DZA65_RS08430	0.88	-1.7
1,780,160	+		DZA65_RS08430	0.88	-0.2
1,780,161	-		DZA65_RS08430	0.89	+0.3
1,780,161	-		DZA65_RS08430	0.89	-1.4
1,780,161	-		DZA65_RS08430	0.89	+0.6
1,780,161	-		DZA65_RS08430	0.89	-1.0
1,780,161	-		DZA65_RS08430	0.89	-0.2
1,780,169	+		DZA65_RS08430	0.90	-3.5
1,780,170	-		DZA65_RS08430	0.90	+0.4
1,780,170	-		DZA65_RS08430	0.90	-0.6
1,780,170	-		DZA65_RS08430	0.90	-0.6
1,780,170	-		DZA65_RS08430	0.90	-0.6
1,780,245	+				+0.3
1,780,246	-				-2.0
1,780,246	-				-1.6
1,780,246	-				-0.4
1,780,262	+				+0.5
1,780,263	-				-0.3
1,780,263	-				-0.6
1,780,263	-				-0.4
1,780,263	-				+2.0
1,780,380	+		DZA65_RS08435	0.16	+0.1
1,780,472	+		DZA65_RS08435	0.27	+0.4
1,780,472	+		DZA65_RS08435	0.27	-0.4
1,780,472	+		DZA65_RS08435	0.27	-0.2
1,780,473	-		DZA65_RS08435	0.28	-0.4
1,780,552	+		DZA65_RS08435	0.37	-0.2
1,780,552	+		DZA65_RS08435	0.37	-2.0
1,780,552	+		DZA65_RS08435	0.37	-1.6
1,780,552	+		DZA65_RS08435	0.37	-0.6
1,780,612	+		DZA65_RS08435	0.45	+0.4
1,780,736	+		DZA65_RS08435	0.60	-0.6
1,780,736	+		DZA65_RS08435	0.60	-1.0
1,780,737	-		DZA65_RS08435	0.61	+2.0
1,780,834	+		DZA65_RS08435	0.73	-1.9
1,780,834	+		DZA65_RS08435	0.73	-0.6
1,780,834	+		DZA65_RS08435	0.73	-1.6
1,780,834	+		DZA65_RS08435	0.73	-0.2
1,780,834	+		DZA65_RS08435	0.73	+0.6
1,780,835	-		DZA65_RS08435	0.73	-0.2
1,780,835	-		DZA65_RS08435	0.73	-0.5
1,780,835	-		DZA65_RS08435	0.73	+1.4
1,780,835	-		DZA65_RS08435	0.73	-0.9
1,780,849	+		DZA65_RS08435	0.75	-0.1
1,780,849	+		DZA65_RS08435	0.75	-0.9
1,780,849	+		DZA65_RS08435	0.75	+0.6
1,780,850	-		DZA65_RS08435	0.75	-0.6
1,781,051	-				-0.2
1,781,076	+				-2.2
1,781,076	+				+0.2
1,781,076	+				+1.0
1,781,077	-				-0.4
1,781,077	-				-0.9
1,781,077	-				+0.4
1,781,077	-				-2.2
1,781,103	-				-0.8
1,781,103	-				-1.9
1,781,103	-				-1.6
1,781,202	-				-0.9
1,781,202	-				-0.7
1,781,238	+				-1.7
1,781,239	-				+0.1
1,781,267	+				-0.4
1,781,268	-				-0.2
1,781,268	-				+0.7
1,781,270	+				+1.1
1,781,280	+				-0.2
1,781,281	-				+0.6
1,781,286	-				-1.6
1,781,292	+				-0.7
1,781,292	+				+0.1
1,781,292	+				-0.7
1,781,292	+				-1.7
1,781,292	+				-0.0
1,781,292	+				-1.4
1,781,292	+				-0.4
1,781,292	+				+2.0
1,781,292	+				-0.8
1,781,293	-				+1.4
1,781,293	-				+0.7
1,781,293	-				-0.0
1,781,293	-				+0.5
1,781,293	-				-0.6
1,781,293	-				+0.1
1,781,293	-				-0.2
1,781,293	-				-0.6
1,781,296	+				+1.8
1,781,296	+				+0.6
1,781,296	+				-0.2
1,781,297	-				-1.0
1,781,297	-				-0.6
1,781,297	-				-1.6
1,781,520	+		DZA65_RS08440	0.24	+0.4
1,781,520	+				+1.4
1,781,520	+		DZA65_RS08440	0.24	+0.9
1,781,520	+		DZA65_RS08440	0.24	+0.6
1,781,521	-		DZA65_RS08440	0.24	+1.2
1,781,533	-		DZA65_RS08440	0.26	+0.4
1,781,533	-		DZA65_RS08440	0.26	-1.6
1,781,559	-		DZA65_RS08440	0.28	-0.6
1,781,559	-		DZA65_RS08440	0.28	+1.4
1,781,559	-		DZA65_RS08440	0.28	-0.6
1,781,559	-		DZA65_RS08440	0.28	+0.0
1,781,606	+		DZA65_RS08440	0.33	+0.8
1,781,607	-		DZA65_RS08440	0.33	+0.4
1,781,610	+		DZA65_RS08440	0.34	-0.7
1,781,610	+		DZA65_RS08440	0.34	-2.0
1,781,610	+		DZA65_RS08440	0.34	-0.2
1,781,610	+		DZA65_RS08440	0.34	-0.4
1,781,610	+		DZA65_RS08440	0.34	-0.4
1,781,611	-		DZA65_RS08440	0.34	-0.8
1,781,611	-		DZA65_RS08440	0.34	-2.2
1,781,611	-		DZA65_RS08440	0.34	-0.6
1,781,611	-		DZA65_RS08440	0.34	+1.2
1,781,777	+		DZA65_RS08440	0.51	+0.6
1,781,777	+		DZA65_RS08440	0.51	-0.9
1,781,778	-		DZA65_RS08440	0.51	-0.9