Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS08270

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,740,180	+		DZA65_RS08265	0.43	-1.9
1,740,180	+		DZA65_RS08265	0.43	+0.1
1,740,180	+		DZA65_RS08265	0.43	-0.9
1,740,180	+		DZA65_RS08265	0.43	+0.8
1,740,209	+		DZA65_RS08265	0.45	-0.9
1,740,209	+		DZA65_RS08265	0.45	-0.8
1,740,210	-		DZA65_RS08265	0.45	-0.1
1,740,364	+		DZA65_RS08265	0.55	-1.6
1,740,364	+		DZA65_RS08265	0.55	-1.4
1,740,364	+		DZA65_RS08265	0.55	+0.1
1,740,365	-		DZA65_RS08265	0.55	-0.7
1,740,365	-				-0.9
1,740,365	-		DZA65_RS08265	0.55	-0.4
1,740,365	-		DZA65_RS08265	0.55	+0.7
1,740,365	-		DZA65_RS08265	0.55	-0.7
1,740,365	-		DZA65_RS08265	0.55	+0.1
1,740,365	-		DZA65_RS08265	0.55	+0.2
1,740,365	-		DZA65_RS08265	0.55	-1.4
1,740,365	-		DZA65_RS08265	0.55	-1.1
1,740,365	-		DZA65_RS08265	0.55	-0.3
1,740,388	+		DZA65_RS08265	0.56	+2.4
1,740,389	-		DZA65_RS08265	0.56	+0.4
1,740,389	-		DZA65_RS08265	0.56	-0.4
1,740,418	-		DZA65_RS08265	0.58	-1.6
1,740,418	-		DZA65_RS08265	0.58	-2.0
1,740,418	-		DZA65_RS08265	0.58	-0.0
1,740,455	+		DZA65_RS08265	0.60	+0.6
1,740,455	+		DZA65_RS08265	0.60	-1.6
1,740,456	-		DZA65_RS08265	0.60	-0.3
1,740,456	-		DZA65_RS08265	0.60	-0.8
1,740,456	-		DZA65_RS08265	0.60	-1.0
1,740,456	-		DZA65_RS08265	0.60	-0.1
1,740,507	+		DZA65_RS08265	0.64	+1.0
1,740,508	-		DZA65_RS08265	0.64	-0.6
1,740,582	+		DZA65_RS08265	0.68	-0.5
1,740,583	-		DZA65_RS08265	0.68	-1.1
1,740,583	-		DZA65_RS08265	0.68	-0.1
1,740,583	-		DZA65_RS08265	0.68	+0.3
1,740,656	+		DZA65_RS08265	0.73	-0.8
1,740,657	-		DZA65_RS08265	0.73	-0.1
1,740,657	-		DZA65_RS08265	0.73	-1.0
1,740,754	+		DZA65_RS08265	0.79	+0.4
1,740,754	+		DZA65_RS08265	0.79	-1.4
1,740,755	-		DZA65_RS08265	0.79	-1.0
1,740,951	+				-1.0
1,741,098	+				-0.3
1,741,098	+				-0.4
1,741,098	+				+0.8
1,741,098	+				-0.9
1,741,173	+		DZA65_RS08270	0.19	-0.2
1,741,174	-		DZA65_RS08270	0.19	-0.5
1,741,174	-		DZA65_RS08270	0.19	-0.9
1,741,310	+				+1.0
1,741,314	-		DZA65_RS08270	0.54	-0.9
1,741,314	-		DZA65_RS08270	0.54	-2.0
1,741,406	-		DZA65_RS08270	0.77	+0.1
1,741,466	+				-1.2
1,741,467	-				-0.4
1,741,467	-				+1.4
1,741,467	-				+0.3
1,741,502	+				+0.4
1,741,502	+				-1.8
1,741,502	+				-0.6
1,741,502	+				-2.0
1,741,502	+				+0.7
1,741,503	-				-1.5
1,741,503	-				-0.6
1,741,503	-				+1.0
1,741,503	-				+0.4
1,741,589	+		DZA65_RS08275	0.13	+0.4
1,741,589	+		DZA65_RS08275	0.13	-1.0
1,741,589	+		DZA65_RS08275	0.13	-0.4
1,741,589	+		DZA65_RS08275	0.13	-0.3
1,741,589	+		DZA65_RS08275	0.13	-0.2
1,741,590	-		DZA65_RS08275	0.13	-0.6
1,741,590	-		DZA65_RS08275	0.13	-1.7
1,741,590	-		DZA65_RS08275	0.13	-0.7
1,741,649	+		DZA65_RS08275	0.21	-0.4
1,741,649	+		DZA65_RS08275	0.21	-1.2
1,741,649	+		DZA65_RS08275	0.21	+0.8
1,741,650	-		DZA65_RS08275	0.21	-1.2
1,741,650	-		DZA65_RS08275	0.21	-0.2
1,741,655	+		DZA65_RS08275	0.22	-0.6
1,741,655	+		DZA65_RS08275	0.22	-0.3
1,742,070	+		DZA65_RS08275	0.81	-1.2
1,742,090	+		DZA65_RS08275	0.84	+1.1
1,742,090	+		DZA65_RS08275	0.84	-1.9
1,742,091	-		DZA65_RS08275	0.84	-1.0
1,742,091	-		DZA65_RS08275	0.84	+0.4
1,742,184	+				-1.4
1,742,185	-				-0.9
1,742,199	+				-0.7
1,742,199	+				-1.0
1,742,199	+				-2.0
1,742,200	-				-2.0
1,742,200	-				-0.5
1,742,203	-				-1.2
1,742,203	-				-0.2
1,742,203	-				+0.9
1,742,214	+				-0.7
1,742,214	+				-1.4
1,742,215	-				+0.2
1,742,215	-				-0.2
1,742,369	+		DZA65_RS08280	0.19	-0.3
1,742,369	+		DZA65_RS08280	0.19	-0.2
1,742,369	+		DZA65_RS08280	0.19	+0.4
1,742,369	+		DZA65_RS08280	0.19	-0.4
1,742,370	-		DZA65_RS08280	0.19	+0.1
1,742,398	+		DZA65_RS08280	0.22	-0.5
1,742,398	+		DZA65_RS08280	0.22	-0.6
1,742,399	-		DZA65_RS08280	0.22	-0.0
1,742,399	-		DZA65_RS08280	0.22	-0.7
1,742,399	-		DZA65_RS08280	0.22	-1.2
1,742,399	-		DZA65_RS08280	0.22	-0.6
1,742,431	+		DZA65_RS08280	0.26	+0.2
1,742,469	+		DZA65_RS08280	0.30	-1.7
1,742,470	-		DZA65_RS08280	0.31	-0.2