Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS08160

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,705,098	+		DZA65_RS08150	0.38	+1.4
1,705,099	-		DZA65_RS08150	0.38	-0.4
1,705,099	-		DZA65_RS08150	0.38	-0.7
1,705,122	+		DZA65_RS08150	0.41	-0.1
1,705,123	-		DZA65_RS08150	0.41	+1.0
1,705,129	+		DZA65_RS08150	0.42	-1.6
1,705,129	+		DZA65_RS08150	0.42	+0.3
1,705,135	+		DZA65_RS08150	0.42	-0.0
1,705,135	+		DZA65_RS08150	0.42	-1.1
1,705,136	-		DZA65_RS08150	0.42	-1.3
1,705,178	+		DZA65_RS08150	0.47	+0.8
1,705,207	+		DZA65_RS08150	0.51	-0.1
1,705,228	+		DZA65_RS08150	0.53	-0.2
1,705,330	+		DZA65_RS08150	0.65	-1.1
1,705,343	+		DZA65_RS08150	0.66	-0.9
1,705,348	+		DZA65_RS08150	0.67	+0.4
1,705,348	+		DZA65_RS08150	0.67	-0.2
1,705,423	-		DZA65_RS08150	0.75	+0.0
1,705,424	+		DZA65_RS08150	0.75	+0.3
1,705,424	+		DZA65_RS08150	0.75	+0.4
1,705,425	-		DZA65_RS08150	0.75	-1.0
1,705,448	-		DZA65_RS08150	0.78	-0.9
1,705,448	-		DZA65_RS08150	0.78	+0.4
1,705,450	-		DZA65_RS08150	0.78	-1.2
1,705,477	-		DZA65_RS08150	0.81	-0.4
1,705,485	-		DZA65_RS08150	0.82	-0.6
1,705,488	+		DZA65_RS08150	0.82	-0.9
1,705,488	+		DZA65_RS08150	0.82	+0.2
1,705,527	-		DZA65_RS08150	0.87	-1.2
1,705,554	-				+1.4
1,705,604	-				+0.9
1,705,604	-				-0.2
1,705,635	-				+0.1
1,705,635	-				+1.0
1,705,635	-				-0.7
1,706,026	-				-0.9
1,706,044	-				+1.1
1,706,044	-				-0.3
1,706,085	-				+1.4
1,706,142	+		DZA65_RS08160	0.24	-1.0
1,706,142	+		DZA65_RS08160	0.24	-1.3
1,706,166	-		DZA65_RS08160	0.33	-0.7
1,706,190	+		DZA65_RS08160	0.42	-0.7
1,706,191	-		DZA65_RS08160	0.43	-1.9
1,706,191	-		DZA65_RS08160	0.43	-1.0
1,706,191	-		DZA65_RS08160	0.43	-0.0
1,706,267	-		DZA65_RS08160	0.72	-0.6
1,706,279	+		DZA65_RS08160	0.76	-1.5
1,706,336	-				-0.6
1,706,336	-				+1.1
1,706,336	-				+0.4
1,706,366	+				+0.8
1,706,367	-				-0.4
1,706,378	+				-1.7
1,706,403	-				-1.2
1,706,424	+				+0.4
1,706,424	+				+1.4
1,706,424	+				-0.2
1,706,443	+				-0.2
1,706,443	+				-0.9
1,706,443	+				+1.9
1,706,444	-				-1.0
1,706,444	-				-0.2
1,706,444	-				-2.0
1,706,444	-				-1.2
1,706,444	-				-0.9
1,706,444	-				+0.2
1,706,444	-				+0.1
1,706,444	-				+1.2
1,706,451	+				-0.9
1,706,451	+				+0.4
1,706,452	-				-0.6
1,706,514	+				+0.9
1,706,522	-				+0.4
1,706,548	+				+0.3
1,706,559	+				-1.0
1,706,591	+				-1.2
1,706,591	+				-1.2
1,706,592	-				+0.2
1,706,653	+				+0.1
1,706,756	+		DZA65_RS08165	0.13	-0.8
1,706,757	-		DZA65_RS08165	0.13	-1.7
1,706,928	+		DZA65_RS08165	0.29	-0.7
1,706,928	+		DZA65_RS08165	0.29	-0.7
1,706,928	+		DZA65_RS08165	0.29	-1.1
1,706,928	+		DZA65_RS08165	0.29	-0.9
1,706,928	+		DZA65_RS08165	0.29	-0.6
1,706,929	-		DZA65_RS08165	0.29	-1.4
1,706,929	-		DZA65_RS08165	0.29	-0.4
1,706,929	-		DZA65_RS08165	0.29	-0.3
1,706,929	-		DZA65_RS08165	0.29	-0.1
1,706,929	-		DZA65_RS08165	0.29	-1.4
1,707,142	+				+2.4
1,707,142	+		DZA65_RS08165	0.49	-1.0
1,707,142	+		DZA65_RS08165	0.49	+2.2
1,707,143	-		DZA65_RS08165	0.49	-0.3
1,707,143	-		DZA65_RS08165	0.49	+0.2
1,707,143	-		DZA65_RS08165	0.49	-1.4
1,707,143	-		DZA65_RS08165	0.49	-0.1
1,707,143	-		DZA65_RS08165	0.49	+0.1
1,707,154	-		DZA65_RS08165	0.50	-1.4