Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS07935

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,657,768	+		DZA65_RS07930	0.61	+0.1
1,657,768	+		DZA65_RS07930	0.61	-0.5
1,657,769	-		DZA65_RS07930	0.61	-0.1
1,657,769	-		DZA65_RS07930	0.61	-0.5
1,657,865	+		DZA65_RS07930	0.68	-0.3
1,657,866	-		DZA65_RS07930	0.68	-0.1
1,657,890	+		DZA65_RS07930	0.69	+1.0
1,657,890	+		DZA65_RS07930	0.69	-0.7
1,657,890	+		DZA65_RS07930	0.69	-1.6
1,658,225	+				-0.7
1,658,225	+				-0.0
1,658,226	-				-0.3
1,658,226	-				-1.1
1,658,290	-				+0.5
1,658,298	+				-0.5
1,658,301	+				+0.1
1,658,302	-				-1.0
1,658,366	-				-1.9
1,658,559	+				-0.0
1,658,635	+				-0.4
1,658,718	-				+0.5
1,658,718	-				-1.5
1,658,718	-				-0.5
1,658,773	+				-0.1
1,658,777	-				-1.3
1,658,930	+		DZA65_RS07935	0.31	+0.7
1,658,942	+		DZA65_RS07935	0.32	-0.4
1,658,942	+		DZA65_RS07935	0.32	-0.1
1,658,942	+		DZA65_RS07935	0.32	+0.2
1,658,942	+		DZA65_RS07935	0.32	-0.5
1,658,942	+		DZA65_RS07935	0.32	+0.7
1,658,943	-		DZA65_RS07935	0.33	-0.8
1,658,948	+		DZA65_RS07935	0.33	+0.5
1,658,949	-		DZA65_RS07935	0.33	-1.1
1,658,976	+		DZA65_RS07935	0.38	-1.2
1,658,976	+		DZA65_RS07935	0.38	+0.1
1,658,976	+		DZA65_RS07935	0.38	+0.7
1,658,976	+		DZA65_RS07935	0.38	-1.5
1,658,976	+		DZA65_RS07935	0.38	+0.7
1,658,977	-		DZA65_RS07935	0.38	+0.1
1,658,978	+		DZA65_RS07935	0.38	-0.2
1,658,979	-		DZA65_RS07935	0.38	-1.9
1,658,979	-		DZA65_RS07935	0.38	-0.5
1,658,979	-		DZA65_RS07935	0.38	-0.3
1,658,979	-		DZA65_RS07935	0.38	-0.1
1,659,019	-		DZA65_RS07935	0.44	-0.2
1,659,020	+		DZA65_RS07935	0.44	-0.1
1,659,033	-		DZA65_RS07935	0.47	-0.8
1,659,059	+		DZA65_RS07935	0.51	-0.2
1,659,065	+		DZA65_RS07935	0.51	+1.0
1,659,100	+		DZA65_RS07935	0.57	-0.1
1,659,173	+		DZA65_RS07935	0.68	-0.5
1,659,173	+		DZA65_RS07935	0.68	+0.5
1,659,173	+		DZA65_RS07935	0.68	+0.0
1,659,174	-		DZA65_RS07935	0.68	-0.5
1,659,174	-		DZA65_RS07935	0.68	+0.9
1,659,174	-				+0.1
1,659,174	-		DZA65_RS07935	0.68	+0.5
1,659,174	-		DZA65_RS07935	0.68	+0.2
1,659,179	+		DZA65_RS07935	0.69	+0.7
1,659,179	+		DZA65_RS07935	0.69	+0.3
1,659,180	-		DZA65_RS07935	0.69	+0.5
1,659,203	+		DZA65_RS07935	0.73	-0.2
1,659,233	+		DZA65_RS07935	0.78	-0.5
1,659,305	+		DZA65_RS07935	0.89	-1.1
1,659,309	+		DZA65_RS07935	0.89	-0.4
1,659,309	+		DZA65_RS07935	0.89	-0.0
1,659,310	-		DZA65_RS07935	0.89	+0.9
1,659,310	-		DZA65_RS07935	0.89	-1.1
1,659,310	-		DZA65_RS07935	0.89	-0.1
1,659,310	-		DZA65_RS07935	0.89	-1.3
1,659,310	-		DZA65_RS07935	0.89	+0.9
1,659,312	-		DZA65_RS07935	0.90	-0.5
1,659,312	-		DZA65_RS07935	0.90	+0.0
1,659,313	+				-1.1
1,659,336	-				-0.5
1,659,344	+				-1.4
1,659,354	+				-0.4
1,659,396	-				-1.2
1,659,437	-				-1.5
1,659,486	+				+0.9
1,659,486	+				+3.0
1,659,505	+		DZA65_RS07940	0.16	-1.4
1,659,505	+		DZA65_RS07940	0.16	-0.5
1,659,509	+		DZA65_RS07940	0.17	-0.6
1,659,509	+		DZA65_RS07940	0.17	-0.3
1,659,509	+		DZA65_RS07940	0.17	+1.2
1,659,509	+		DZA65_RS07940	0.17	-0.3
1,659,510	-		DZA65_RS07940	0.18	+0.4
1,659,510	-		DZA65_RS07940	0.18	-1.2
1,659,554	+		DZA65_RS07940	0.32	-1.0
1,659,591	-		DZA65_RS07940	0.45	-1.0
1,659,591	-		DZA65_RS07940	0.45	+0.1
1,659,622	+		DZA65_RS07940	0.55	-1.1
1,659,646	-		DZA65_RS07940	0.63	-0.5
1,659,657	+		DZA65_RS07940	0.66	+0.3
1,659,658	-		DZA65_RS07940	0.67	-0.6
1,659,692	+		DZA65_RS07940	0.78	-0.5
1,659,693	-		DZA65_RS07940	0.78	+0.1
1,659,759	-				-0.9
1,659,762	+				-0.6
1,659,787	+				-0.5
1,659,808	+				+0.5
1,659,920	-				-0.0
1,659,920	-				-0.5
1,659,972	+				-0.9
1,660,019	-				+0.6
1,660,113	+				+0.5
1,660,117	+				-0.1
1,660,117	+				+0.7
1,660,140	+				+0.5
1,660,141	-				+0.0
1,660,187	-				-0.4
1,660,277	+				-1.2
1,660,316	-		DZA65_RS22835	0.15	-1.4
1,660,328	+		DZA65_RS22835	0.19	-0.1
1,660,342	+		DZA65_RS22835	0.25	+0.3
1,660,343	-		DZA65_RS22835	0.25	-0.2
1,660,374	-				+0.5