Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS07925

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,654,182	+				-0.5
1,654,182	+				-0.1
1,654,183	-				-0.3
1,654,202	+				-0.4
1,654,202	+				-1.3
1,654,203	-				-1.9
1,654,207	+				-1.5
1,654,208	-				-0.2
1,654,219	+				+0.0
1,654,219	+				-0.5
1,654,228	+				-0.3
1,654,228	+				-0.9
1,654,229	-				-1.1
1,654,229	-				-0.1
1,654,229	-				-0.1
1,654,262	-				-0.0
1,654,262	-				-1.9
1,654,291	+				-0.5
1,654,292	-				+1.5
1,654,292	-				-0.5
1,654,294	+				+0.1
1,654,294	+				-1.3
1,654,303	+				+0.5
1,654,327	+				+0.5
1,654,327	+				+0.3
1,654,328	-				+0.3
1,654,333	+				+0.7
1,654,390	-				-0.6
1,654,438	+				-0.4
1,654,507	+				+0.1
1,654,541	+				+1.5
1,654,549	+				-0.9
1,654,595	+				+0.0
1,654,595	+				-1.7
1,654,665	+				-1.2
1,654,666	-				-0.9
1,654,752	+				-0.7
1,654,825	+				+0.5
1,654,839	-				-1.3
1,654,871	+				-2.1
1,654,884	+				-0.9
1,654,885	-				-1.3
1,654,885	-				-0.5
1,654,906	-				-0.0
1,654,906	-				+0.9
1,654,950	+				+1.1
1,654,978	-				-1.7
1,654,987	+				-1.5
1,654,987	+				-1.7
1,655,053	+				+0.3
1,655,053	+				-0.5
1,655,053	+				+0.2
1,655,102	+				+0.0
1,655,102	+				-1.5
1,655,102	+				-1.9
1,655,102	+				-0.3
1,655,103	-				+2.2
1,655,103	-				-1.2
1,655,103	-				-0.4
1,655,111	+				-0.1
1,655,112	-				+1.5
1,655,113	+				-0.9
1,655,113	+				+1.9
1,655,113	+				-0.3
1,655,113	+				-1.5
1,655,113	+				+1.2
1,655,113	+				-1.0
1,655,113	+				-2.3
1,655,113	+				-1.5
1,655,113	+				-2.3
1,655,113	+				+0.5
1,655,114	-				-0.1
1,655,114	-				-0.5
1,655,114	-				+0.1
1,655,114	-				-1.3
1,655,114	-				-1.0
1,655,114	-				+1.5
1,655,114	-				+1.2
1,655,117	+				-1.1
1,655,117	+				-0.4
1,655,117	+				-2.0
1,655,117	+				-1.3
1,655,117	+				-0.1
1,655,118	-				-0.6
1,655,118	-				-0.2
1,655,118	-				+1.2
1,655,118	-				-0.9
1,655,118	-				-0.5
1,655,118	-				+0.7
1,655,118	-				+0.5
1,655,118	-				+0.8
1,655,118	-				-1.0
1,655,123	+				-0.9
1,655,123	+				-0.7
1,655,124	-				-0.1
1,655,124	-				-0.7
1,655,124	-				+0.1
1,655,129	+				+0.6
1,655,130	-				+1.2
1,655,130	-				-0.7
1,655,149	+				-1.5
1,655,150	-				-0.5
1,655,164	-				-0.1
1,655,217	-				-0.1
1,655,223	+				-2.2
1,655,224	-				-0.1
1,655,224	-				+0.0
1,655,225	+				+0.5
1,655,225	+				-1.3
1,655,225	+				-0.9
1,655,225	+				-0.1
1,655,225	+				-0.1
1,655,225	+				-2.0
1,655,225	+				+1.7
1,655,225	+				+0.0
1,655,225	+				+0.1
1,655,225	+				+0.5
1,655,225	+				-1.3
1,655,226	-				-2.2
1,655,226	-				+0.1
1,655,226	-				+0.5
1,655,226	-				+1.0
1,655,226	-				+1.5
1,655,226	-				-0.5
1,655,226	-				-0.3
1,655,258	-				-0.9
1,655,388	+		DZA65_RS07925	0.17	-0.4
1,655,388	+		DZA65_RS07925	0.17	+2.7
1,655,389	-		DZA65_RS07925	0.17	-0.5
1,655,389	-		DZA65_RS07925	0.17	-1.5
1,655,422	-		DZA65_RS07925	0.19	+0.5
1,655,551	+		DZA65_RS07925	0.28	-1.0
1,655,551	+		DZA65_RS07925	0.28	+0.5
1,655,551	+		DZA65_RS07925	0.28	+0.1
1,655,551	+		DZA65_RS07925	0.28	-0.4
1,655,552	-		DZA65_RS07925	0.28	+0.0
1,655,552	-		DZA65_RS07925	0.28	-0.1
1,655,552	-		DZA65_RS07925	0.28	-1.3
1,655,593	+		DZA65_RS07925	0.31	-0.2
1,655,594	-		DZA65_RS07925	0.31	-0.9
1,655,708	+		DZA65_RS07925	0.39	-2.0
1,655,708	+		DZA65_RS07925	0.39	-0.1
1,655,709	-		DZA65_RS07925	0.39	+0.7
1,655,755	+				-0.5
1,655,755	+		DZA65_RS07925	0.42	-0.5
1,655,755	+		DZA65_RS07925	0.42	-0.1
1,655,756	-		DZA65_RS07925	0.42	+0.1
1,655,880	+		DZA65_RS07925	0.51	-0.9
1,655,880	+		DZA65_RS07925	0.51	-0.1
1,655,881	-		DZA65_RS07925	0.51	-1.8
1,655,962	+		DZA65_RS07925	0.57	-0.7
1,655,982	-		DZA65_RS07925	0.58	+0.0
1,655,982	-		DZA65_RS07925	0.58	+0.0
1,656,020	+		DZA65_RS07925	0.61	-0.1
1,656,020	+		DZA65_RS07925	0.61	-1.0
1,656,021	-		DZA65_RS07925	0.61	-1.5
1,656,021	-		DZA65_RS07925	0.61	+1.2
1,656,021	-		DZA65_RS07925	0.61	-0.1
1,656,021	-		DZA65_RS07925	0.61	-1.3
1,656,024	+		DZA65_RS07925	0.61	+0.5
1,656,024	+		DZA65_RS07925	0.61	-1.0
1,656,024	+				-0.1
1,656,024	+		DZA65_RS07925	0.61	-0.5
1,656,024	+		DZA65_RS07925	0.61	-1.5
1,656,024	+		DZA65_RS07925	0.61	+0.0
1,656,024	+		DZA65_RS07925	0.61	-1.7
1,656,025	-		DZA65_RS07925	0.61	+1.1
1,656,025	-		DZA65_RS07925	0.61	-1.1
1,656,025	-		DZA65_RS07925	0.61	-0.9
1,656,025	-		DZA65_RS07925	0.61	-1.9
1,656,025	-				+1.5
1,656,038	+		DZA65_RS07925	0.62	-0.9
1,656,038	+		DZA65_RS07925	0.62	-0.1
1,656,039	-		DZA65_RS07925	0.62	-1.3
1,656,081	+		DZA65_RS07925	0.65	+0.2
1,656,118	-		DZA65_RS07925	0.67	-0.5
1,656,118	-		DZA65_RS07925	0.67	-0.9
1,656,118	-		DZA65_RS07925	0.67	+0.2
1,656,118	-		DZA65_RS07925	0.67	-0.5
1,656,118	-		DZA65_RS07925	0.67	+0.7
1,656,233	+		DZA65_RS07925	0.75	-0.4
1,656,234	-		DZA65_RS07925	0.75	-0.3
1,656,236	+		DZA65_RS07925	0.76	-2.1
1,656,237	-		DZA65_RS07925	0.76	-0.1
1,656,237	-		DZA65_RS07925	0.76	-0.4
1,656,440	+		DZA65_RS07925	0.90	-0.9
1,656,441	-		DZA65_RS07925	0.90	-2.0
1,656,469	+				-1.5
1,656,469	+				+1.2
1,656,469	+				+2.5
1,656,469	+				-0.3
1,656,470	-				+0.1
1,656,470	-				+0.1
1,656,470	-				-1.9
1,656,470	-				+0.1
1,656,470	-				+0.1
1,656,470	-				+0.5
1,656,470	-				-0.3
1,656,551	+				-1.3
1,656,551	+				-0.3
1,656,551	+				+0.0
1,656,551	+				+0.2
1,656,551	+				+0.5
1,656,551	+				+0.7
1,656,552	-				+0.1
1,656,558	+				-0.3
1,656,559	-				-0.5
1,656,559	-				-0.5
1,656,686	+				-1.0
1,656,687	-				+0.5
1,656,687	-				+0.3
1,656,687	-				+0.5
1,656,689	+				+0.9
1,656,690	-				-0.5
1,656,739	+				-0.3
1,656,762	+				+1.2
1,656,762	+				-0.4
1,656,762	+				+0.2
1,656,762	+				-0.1
1,656,763	-				+0.6
1,656,763	-				-1.3
1,656,763	-				-0.1
1,656,763	-				+0.8
1,656,763	-				+1.5
1,656,763	-				-1.0
1,656,765	-				-0.3
1,656,765	-				-0.7
1,656,777	-				-1.7
1,656,794	+				+0.1
1,656,849	+				-0.5
1,656,849	+				+0.1
1,656,850	-				-1.7
1,656,850	-				-0.9
1,656,850	-				-1.2
1,656,850	-				-0.9
1,656,851	+				-0.0
1,656,851	+				-2.0
1,656,851	+				-0.1
1,656,851	+				-0.1
1,656,851	+				-0.3
1,656,851	+				-1.4
1,656,851	+				-0.2
1,656,852	-				-0.1
1,656,852	-				+0.3
1,656,852	-				+0.5
1,656,852	-				+1.5
1,656,852	-				-1.6
1,656,858	+				-0.0
1,656,858	+				-1.0
1,656,858	+				-0.3
1,656,859	-				+0.3
1,656,859	-				-0.4
1,656,862	+				-0.0
1,656,862	+				-1.0
1,656,863	-				+0.5
1,656,935	+				+1.5
1,656,935	+				+0.5
1,656,936	-				+0.2
1,656,966	+				+0.2
1,656,966	+				+0.9
1,656,966	+				+0.2
1,656,967	-				-0.6
1,656,967	-				-0.1
1,656,967	-				-0.8
1,657,036	+				+1.5
1,657,037	-				-0.5
1,657,037	-				+1.0
1,657,060	+		DZA65_RS07930	0.11	+1.9
1,657,091	-		DZA65_RS07930	0.13	-0.4
1,657,091	-		DZA65_RS07930	0.13	-0.7
1,657,100	+		DZA65_RS07930	0.14	-0.5
1,657,101	-		DZA65_RS07930	0.14	-0.5
1,657,153	+		DZA65_RS07930	0.18	-1.6
1,657,153	+		DZA65_RS07930	0.18	-1.3
1,657,154	-		DZA65_RS07930	0.18	-0.5
1,657,175	-		DZA65_RS07930	0.19	-1.0
1,657,179	+		DZA65_RS07930	0.19	-0.5
1,657,179	+		DZA65_RS07930	0.19	-1.1
1,657,180	-		DZA65_RS07930	0.19	+1.5
1,657,180	-		DZA65_RS07930	0.19	-0.6
1,657,207	-		DZA65_RS07930	0.21	-0.3
1,657,236	-		DZA65_RS07930	0.23	-0.1
1,657,312	-		DZA65_RS07930	0.29	-1.3
1,657,330	+		DZA65_RS07930	0.30	-1.1
1,657,330	+		DZA65_RS07930	0.30	+0.5
1,657,330	+		DZA65_RS07930	0.30	+0.5
1,657,330	+		DZA65_RS07930	0.30	-1.0
1,657,331	-		DZA65_RS07930	0.30	-1.7
1,657,342	-		DZA65_RS07930	0.31	+0.5
1,657,393	+		DZA65_RS07930	0.34	-1.5
1,657,394	-		DZA65_RS07930	0.35	-0.5