Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS07920

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,651,926	+		DZA65_RS07910	0.86	+1.3
1,651,927	-		DZA65_RS07910	0.86	-0.1
1,651,927	-		DZA65_RS07910	0.86	-1.0
1,651,963	+		DZA65_RS07910	0.89	+0.8
1,652,070	+				+0.1
1,652,071	-				+0.9
1,652,071	-				+0.3
1,652,190	+		DZA65_RS07915	0.16	-1.0
1,652,191	-		DZA65_RS07915	0.16	+1.0
1,652,323	+		DZA65_RS07915	0.34	-0.7
1,652,324	-		DZA65_RS07915	0.35	-0.3
1,652,405	-		DZA65_RS07915	0.46	+0.7
1,652,422	+		DZA65_RS07915	0.48	-1.1
1,652,423	-		DZA65_RS07915	0.48	-0.3
1,652,423	-		DZA65_RS07915	0.48	-0.0
1,652,743	+				-0.6
1,652,846	+				-0.9
1,652,847	-				-0.1
1,652,884	+				-0.4
1,652,892	+				-0.5
1,652,893	-				-0.1
1,652,893	-				-0.4
1,652,895	+				-0.0
1,652,896	-				-0.5
1,652,896	-				-0.9
1,652,901	+				-0.5
1,652,901	+				-0.9
1,652,902	-				+0.2
1,652,902	-				+0.9
1,652,902	-				-0.5
1,652,902	-				+0.5
1,652,902	-				-1.8
1,652,902	-				-0.5
1,652,927	+				-0.9
1,652,928	-				-1.9
1,653,058	+		DZA65_RS07920	0.13	-0.5
1,653,058	+		DZA65_RS07920	0.13	+1.0
1,653,058	+		DZA65_RS07920	0.13	-0.9
1,653,059	-		DZA65_RS07920	0.13	+0.6
1,653,059	-		DZA65_RS07920	0.13	-1.3
1,653,059	-		DZA65_RS07920	0.13	-1.4
1,653,059	-		DZA65_RS07920	0.13	+1.0
1,653,060	+		DZA65_RS07920	0.13	-0.4
1,653,060	+		DZA65_RS07920	0.13	-0.1
1,653,060	+		DZA65_RS07920	0.13	-0.2
1,653,060	+		DZA65_RS07920	0.13	-0.1
1,653,060	+		DZA65_RS07920	0.13	+1.5
1,653,060	+		DZA65_RS07920	0.13	+0.5
1,653,060	+		DZA65_RS07920	0.13	-1.5
1,653,060	+		DZA65_RS07920	0.13	+0.5
1,653,060	+		DZA65_RS07920	0.13	-0.3
1,653,060	+		DZA65_RS07920	0.13	-0.2
1,653,060	+		DZA65_RS07920	0.13	-0.2
1,653,061	-		DZA65_RS07920	0.13	-2.1
1,653,061	-		DZA65_RS07920	0.13	-1.7
1,653,061	-		DZA65_RS07920	0.13	-1.1
1,653,061	-		DZA65_RS07920	0.13	+1.2
1,653,061	-		DZA65_RS07920	0.13	+0.3
1,653,063	+		DZA65_RS07920	0.13	+0.0
1,653,063	+		DZA65_RS07920	0.13	+0.5
1,653,069	+		DZA65_RS07920	0.13	-1.5
1,653,069	+		DZA65_RS07920	0.13	-0.6
1,653,070	-		DZA65_RS07920	0.14	+0.2
1,653,070	-		DZA65_RS07920	0.14	+2.0
1,653,070	-		DZA65_RS07920	0.14	+0.7
1,653,096	+		DZA65_RS07920	0.16	-0.5
1,653,113	+		DZA65_RS07920	0.17	-0.5
1,653,294	+		DZA65_RS07920	0.30	-0.9
1,653,295	-		DZA65_RS07920	0.30	+0.0
1,653,576	+		DZA65_RS07920	0.51	-0.3
1,653,576	+		DZA65_RS07920	0.51	-0.9
1,653,577	-		DZA65_RS07920	0.51	-0.5
1,653,577	-				-1.1
1,653,577	-		DZA65_RS07920	0.51	-1.2
1,653,638	-		DZA65_RS07920	0.56	-1.2
1,653,707	+		DZA65_RS07920	0.61	-0.3
1,653,895	+		DZA65_RS07920	0.75	-1.6
1,653,895	+		DZA65_RS07920	0.75	-1.2
1,653,895	+		DZA65_RS07920	0.75	+0.1
1,653,896	-		DZA65_RS07920	0.75	-0.1
1,653,896	-		DZA65_RS07920	0.75	-0.8
1,653,896	-		DZA65_RS07920	0.75	-0.4
1,653,897	+		DZA65_RS07920	0.75	-0.6
1,653,897	+		DZA65_RS07920	0.75	+0.9
1,653,897	+		DZA65_RS07920	0.75	+1.1
1,653,897	+		DZA65_RS07920	0.75	+1.1
1,653,897	+		DZA65_RS07920	0.75	-1.3
1,653,897	+		DZA65_RS07920	0.75	-0.1
1,653,897	+		DZA65_RS07920	0.75	+0.1
1,653,897	+		DZA65_RS07920	0.75	-0.1
1,653,897	+		DZA65_RS07920	0.75	-0.7
1,653,897	+		DZA65_RS07920	0.75	-0.8
1,653,897	+		DZA65_RS07920	0.75	+0.5
1,653,897	+		DZA65_RS07920	0.75	-1.3
1,653,897	+		DZA65_RS07920	0.75	+1.0
1,653,898	-		DZA65_RS07920	0.75	+0.3
1,653,898	-		DZA65_RS07920	0.75	+0.7
1,653,898	-		DZA65_RS07920	0.75	-0.9
1,653,898	-		DZA65_RS07920	0.75	-1.1
1,653,898	-		DZA65_RS07920	0.75	+1.9
1,653,898	-		DZA65_RS07920	0.75	-2.0
1,653,898	-		DZA65_RS07920	0.75	+0.5
1,653,966	+		DZA65_RS07920	0.80	-0.1
1,653,966	+		DZA65_RS07920	0.80	-0.0
1,653,966	+		DZA65_RS07920	0.80	-0.5
1,653,966	+		DZA65_RS07920	0.80	+0.5
1,653,967	-		DZA65_RS07920	0.80	-1.0
1,653,967	-		DZA65_RS07920	0.80	-0.3
1,653,967	-		DZA65_RS07920	0.80	+2.0
1,654,103	+				+0.3
1,654,103	+				-2.4
1,654,104	-				-0.3
1,654,104	-				-1.0
1,654,148	+				-2.2
1,654,148	+				-1.3
1,654,148	+				-0.9
1,654,149	-				+0.5
1,654,149	-				-0.1
1,654,149	-				-1.3
1,654,182	+				-0.5
1,654,182	+				-0.1
1,654,183	-				-0.3
1,654,202	+				-0.4
1,654,202	+				-1.3
1,654,203	-				-1.9
1,654,207	+				-1.5
1,654,208	-				-0.2
1,654,219	+				+0.0
1,654,219	+				-0.5
1,654,228	+				-0.3
1,654,228	+				-0.9
1,654,229	-				-1.1
1,654,229	-				-0.1
1,654,229	-				-0.1
1,654,262	-				-0.0
1,654,262	-				-1.9
1,654,291	+				-0.5
1,654,292	-				+1.5
1,654,292	-				-0.5
1,654,294	+				+0.1
1,654,294	+				-1.3
1,654,303	+				+0.5
1,654,327	+				+0.5
1,654,327	+				+0.3
1,654,328	-				+0.3
1,654,333	+				+0.7
1,654,390	-				-0.6
1,654,438	+				-0.4
1,654,507	+				+0.1
1,654,541	+				+1.5
1,654,549	+				-0.9
1,654,595	+				+0.0
1,654,595	+				-1.7
1,654,665	+				-1.2
1,654,666	-				-0.9
1,654,752	+				-0.7
1,654,825	+				+0.5
1,654,839	-				-1.3
1,654,871	+				-2.1
1,654,884	+				-0.9
1,654,885	-				-1.3
1,654,885	-				-0.5
1,654,906	-				-0.0
1,654,906	-				+0.9
1,654,950	+				+1.1
1,654,978	-				-1.7
1,654,987	+				-1.5
1,654,987	+				-1.7
1,655,053	+				+0.3
1,655,053	+				-0.5
1,655,053	+				+0.2
1,655,102	+				+0.0
1,655,102	+				-1.5
1,655,102	+				-1.9
1,655,102	+				-0.3
1,655,103	-				+2.2
1,655,103	-				-1.2
1,655,103	-				-0.4
1,655,111	+				-0.1
1,655,112	-				+1.5
1,655,113	+				-0.9
1,655,113	+				+1.9
1,655,113	+				-0.3
1,655,113	+				-1.5
1,655,113	+				+1.2
1,655,113	+				-1.0
1,655,113	+				-2.3
1,655,113	+				-1.5
1,655,113	+				-2.3
1,655,113	+				+0.5
1,655,114	-				-0.1
1,655,114	-				-0.5
1,655,114	-				+0.1
1,655,114	-				-1.3
1,655,114	-				-1.0
1,655,114	-				+1.5
1,655,114	-				+1.2
1,655,117	+				-1.1
1,655,117	+				-0.4
1,655,117	+				-2.0
1,655,117	+				-1.3
1,655,117	+				-0.1
1,655,118	-				-0.6
1,655,118	-				-0.2
1,655,118	-				+1.2
1,655,118	-				-0.9
1,655,118	-				-0.5
1,655,118	-				+0.7
1,655,118	-				+0.5
1,655,118	-				+0.8
1,655,118	-				-1.0
1,655,123	+				-0.9
1,655,123	+				-0.7
1,655,124	-				-0.1
1,655,124	-				-0.7
1,655,124	-				+0.1
1,655,129	+				+0.6
1,655,130	-				+1.2
1,655,130	-				-0.7
1,655,149	+				-1.5
1,655,150	-				-0.5
1,655,164	-				-0.1
1,655,217	-				-0.1
1,655,223	+				-2.2
1,655,224	-				-0.1
1,655,224	-				+0.0
1,655,225	+				+0.5
1,655,225	+				-1.3
1,655,225	+				-0.9
1,655,225	+				-0.1
1,655,225	+				-0.1
1,655,225	+				-2.0
1,655,225	+				+1.7
1,655,225	+				+0.0
1,655,225	+				+0.1
1,655,225	+				+0.5
1,655,225	+				-1.3
1,655,226	-				-2.2
1,655,226	-				+0.1
1,655,226	-				+0.5
1,655,226	-				+1.0
1,655,226	-				+1.5
1,655,226	-				-0.5
1,655,226	-				-0.3