Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS07755

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,614,165	+				+0.1
1,614,165	+		DZA65_RS07750	0.74	+0.5
1,614,165	+		DZA65_RS07750	0.74	-0.5
1,614,165	+		DZA65_RS07750	0.74	-2.4
1,614,165	+		DZA65_RS07750	0.74	-0.5
1,614,165	+		DZA65_RS07750	0.74	+0.5
1,614,166	-		DZA65_RS07750	0.74	-1.0
1,614,166	-		DZA65_RS07750	0.74	+2.5
1,614,166	-		DZA65_RS07750	0.74	+0.2
1,614,166	-		DZA65_RS07750	0.74	+0.1
1,614,237	+		DZA65_RS07750	0.77	+3.1
1,614,237	+		DZA65_RS07750	0.77	-0.8
1,614,237	+		DZA65_RS07750	0.77	-2.8
1,614,237	+		DZA65_RS07750	0.77	+0.4
1,614,237	+		DZA65_RS07750	0.77	-0.5
1,614,237	+		DZA65_RS07750	0.77	-0.5
1,614,238	-		DZA65_RS07750	0.77	-1.9
1,614,238	-		DZA65_RS07750	0.77	-0.9
1,614,292	+		DZA65_RS07750	0.79	+1.9
1,614,293	-		DZA65_RS07750	0.79	-0.4
1,614,303	+		DZA65_RS07750	0.79	+0.7
1,614,303	+		DZA65_RS07750	0.79	-1.2
1,614,304	-		DZA65_RS07750	0.79	-1.0
1,614,316	-		DZA65_RS07750	0.79	-2.8
1,614,316	-		DZA65_RS07750	0.79	-0.5
1,614,328	+		DZA65_RS07750	0.80	-0.4
1,614,328	+		DZA65_RS07750	0.80	-1.2
1,614,328	+		DZA65_RS07750	0.80	+0.1
1,614,329	-		DZA65_RS07750	0.80	-0.8
1,614,354	+				+0.9
1,614,354	+		DZA65_RS07750	0.80	-0.4
1,614,354	+		DZA65_RS07750	0.80	-0.9
1,614,354	+		DZA65_RS07750	0.80	-0.4
1,614,354	+		DZA65_RS07750	0.80	-0.4
1,614,354	+		DZA65_RS07750	0.80	-0.9
1,614,354	+		DZA65_RS07750	0.80	-0.3
1,614,355	-		DZA65_RS07750	0.81	+0.1
1,614,355	-		DZA65_RS07750	0.81	-1.9
1,614,355	-		DZA65_RS07750	0.81	+0.0
1,614,355	-		DZA65_RS07750	0.81	-1.8
1,614,355	-		DZA65_RS07750	0.81	-0.3
1,614,355	-		DZA65_RS07750	0.81	-0.5
1,614,355	-		DZA65_RS07750	0.81	+1.1
1,614,410	+		DZA65_RS07750	0.82	+0.1
1,614,459	+		DZA65_RS07750	0.84	-0.3
1,614,553	+		DZA65_RS07750	0.87	-0.2
1,614,559	+		DZA65_RS07750	0.87	-1.0
1,614,560	-		DZA65_RS07750	0.87	-2.3
1,614,628	-		DZA65_RS07750	0.89	+0.1
1,614,634	+		DZA65_RS07750	0.89	+0.9
1,614,643	-		DZA65_RS07750	0.90	+0.4
1,614,657	+				-1.9
1,614,756	+				-0.1
1,614,756	+				+0.9
1,614,756	+				+0.5
1,614,757	-				-1.3
1,614,757	-				-0.0
1,614,945	+				-1.7
1,614,945	+				-2.8
1,614,945	+				-0.3
1,614,964	+				-1.7
1,614,964	+				-0.6
1,614,964	+				-0.3
1,614,964	+				-1.3
1,614,965	-				-1.9
1,614,965	-				-1.1
1,614,965	-				+0.2
1,614,965	-				-0.2
1,614,965	-				+1.5
1,614,982	-				-0.5
1,615,001	+				-1.3
1,615,001	+				-0.7
1,615,049	+				-0.5
1,615,112	+				-0.5
1,615,113	-				-0.4
1,615,173	+				+0.2
1,615,173	+				-1.3
1,615,173	+				-1.1
1,615,173	+				+2.5
1,615,174	-				-0.7
1,615,174	-				-0.3
1,615,174	-				-0.7
1,615,174	-				-1.1
1,615,191	-				-1.0
1,615,390	+		DZA65_RS07755	0.21	-0.7
1,615,390	+		DZA65_RS07755	0.21	-1.3
1,615,863	+		DZA65_RS07755	0.65	-0.1
1,615,863	+		DZA65_RS07755	0.65	-0.5
1,615,864	-		DZA65_RS07755	0.65	-0.9
1,615,864	-		DZA65_RS07755	0.65	-1.3
1,615,940	+		DZA65_RS07755	0.72	+0.1
1,615,940	+		DZA65_RS07755	0.72	-0.1
1,615,940	+		DZA65_RS07755	0.72	+0.2
1,615,940	+		DZA65_RS07755	0.72	-0.7
1,615,940	+		DZA65_RS07755	0.72	+0.1
1,615,940	+		DZA65_RS07755	0.72	-0.4
1,615,940	+		DZA65_RS07755	0.72	+0.5
1,615,940	+		DZA65_RS07755	0.72	-1.6
1,615,940	+		DZA65_RS07755	0.72	+1.5
1,615,940	+		DZA65_RS07755	0.72	+0.7
1,615,940	+		DZA65_RS07755	0.72	+0.1
1,615,940	+		DZA65_RS07755	0.72	-0.5
1,615,940	+		DZA65_RS07755	0.72	-1.1
1,615,940	+		DZA65_RS07755	0.72	-2.6
1,615,940	+		DZA65_RS07755	0.72	+0.1
1,615,940	+		DZA65_RS07755	0.72	-1.9
1,615,940	+		DZA65_RS07755	0.72	-0.1
1,615,940	+		DZA65_RS07755	0.72	+0.1
1,615,940	+		DZA65_RS07755	0.72	-0.5
1,615,940	+		DZA65_RS07755	0.72	+1.1
1,615,940	+		DZA65_RS07755	0.72	-0.0
1,615,941	-		DZA65_RS07755	0.72	-0.9
1,615,941	-		DZA65_RS07755	0.72	-1.1
1,615,941	-		DZA65_RS07755	0.72	-0.9
1,615,941	-		DZA65_RS07755	0.72	+0.2
1,615,941	-		DZA65_RS07755	0.72	-2.4
1,615,941	-		DZA65_RS07755	0.72	-1.0
1,615,941	-		DZA65_RS07755	0.72	-0.1
1,615,941	-				+1.5
1,615,941	-		DZA65_RS07755	0.72	-1.3
1,615,941	-		DZA65_RS07755	0.72	+0.1
1,615,941	-		DZA65_RS07755	0.72	-0.1
1,615,941	-		DZA65_RS07755	0.72	-0.1
1,615,941	-		DZA65_RS07755	0.72	+0.8
1,615,941	-		DZA65_RS07755	0.72	-1.1
1,615,941	-		DZA65_RS07755	0.72	-1.0
1,615,941	-		DZA65_RS07755	0.72	-1.1
1,615,941	-		DZA65_RS07755	0.72	-0.7
1,615,944	+		DZA65_RS07755	0.73	+0.5
1,615,944	+		DZA65_RS07755	0.73	-1.5
1,615,944	+		DZA65_RS07755	0.73	-1.1
1,615,944	+		DZA65_RS07755	0.73	-1.2
1,615,944	+		DZA65_RS07755	0.73	-1.5
1,615,944	+		DZA65_RS07755	0.73	-0.9
1,615,945	-		DZA65_RS07755	0.73	-0.5
1,615,945	-		DZA65_RS07755	0.73	+0.7
1,615,945	-		DZA65_RS07755	0.73	-1.6
1,615,945	-		DZA65_RS07755	0.73	-0.9
1,615,982	+		DZA65_RS07755	0.76	-2.2
1,616,092	+		DZA65_RS07755	0.86	+0.5
1,616,092	+		DZA65_RS07755	0.86	-0.5
1,616,092	+		DZA65_RS07755	0.86	+0.5
1,616,092	+		DZA65_RS07755	0.86	-1.0
1,616,092	+		DZA65_RS07755	0.86	+0.3
1,616,092	+		DZA65_RS07755	0.86	+0.0
1,616,092	+		DZA65_RS07755	0.86	+0.6
1,616,092	+		DZA65_RS07755	0.86	-1.3
1,616,092	+				-0.1
1,616,092	+		DZA65_RS07755	0.86	-0.3
1,616,093	-		DZA65_RS07755	0.86	-1.2
1,616,093	-		DZA65_RS07755	0.86	+0.2
1,616,093	-		DZA65_RS07755	0.86	-0.9
1,616,183	-				-0.9
1,616,206	-				-0.4
1,616,282	+				-0.4
1,616,361	+				+0.5
1,616,361	+				+0.1
1,616,362	-				-1.0
1,616,362	-				+0.7
1,616,362	-				-0.7
1,616,362	-				-0.1
1,616,406	+		DZA65_RS07760	0.11	-1.0
1,616,407	-		DZA65_RS07760	0.12	-0.5
1,616,553	+		DZA65_RS07760	0.32	+1.5
1,616,553	+		DZA65_RS07760	0.32	-0.3
1,616,553	+		DZA65_RS07760	0.32	-0.5
1,616,553	+		DZA65_RS07760	0.32	+0.1
1,616,553	+		DZA65_RS07760	0.32	+0.5
1,616,553	+		DZA65_RS07760	0.32	+0.9
1,616,553	+		DZA65_RS07760	0.32	-0.8
1,616,554	-		DZA65_RS07760	0.32	+0.9
1,616,554	-		DZA65_RS07760	0.32	+0.6
1,616,554	-		DZA65_RS07760	0.32	-0.3
1,616,554	-		DZA65_RS07760	0.32	-1.4
1,616,554	-		DZA65_RS07760	0.32	-0.3
1,616,554	-		DZA65_RS07760	0.32	-1.7
1,616,554	-		DZA65_RS07760	0.32	-0.0
1,616,554	-		DZA65_RS07760	0.32	-0.5
1,616,554	-		DZA65_RS07760	0.32	-1.1
1,616,554	-		DZA65_RS07760	0.32	-0.7
1,616,554	-		DZA65_RS07760	0.32	-0.7
1,616,554	-				-0.5
1,616,559	+		DZA65_RS07760	0.33	-0.1
1,616,559	+		DZA65_RS07760	0.33	-1.9
1,616,559	+		DZA65_RS07760	0.33	-1.8
1,616,559	+		DZA65_RS07760	0.33	-1.7
1,616,559	+		DZA65_RS07760	0.33	-1.0
1,616,559	+		DZA65_RS07760	0.33	+0.3
1,616,559	+		DZA65_RS07760	0.33	-0.9
1,616,559	+		DZA65_RS07760	0.33	-1.0
1,616,560	-		DZA65_RS07760	0.33	+0.5
1,616,560	-		DZA65_RS07760	0.33	-0.1
1,616,560	-		DZA65_RS07760	0.33	-1.6
1,616,560	-		DZA65_RS07760	0.33	-0.1
1,616,560	-		DZA65_RS07760	0.33	-0.5
1,616,560	-		DZA65_RS07760	0.33	-0.6
1,616,560	-		DZA65_RS07760	0.33	-0.9
1,616,560	-		DZA65_RS07760	0.33	-1.1
1,616,560	-		DZA65_RS07760	0.33	+0.5
1,616,560	-		DZA65_RS07760	0.33	-0.9
1,616,841	+		DZA65_RS07760	0.72	-1.6
1,616,841	+		DZA65_RS07760	0.72	+1.5
1,616,841	+		DZA65_RS07760	0.72	-1.2
1,616,841	+		DZA65_RS07760	0.72	+0.2
1,616,842	-		DZA65_RS07760	0.72	-1.5
1,616,842	-		DZA65_RS07760	0.72	-0.6
1,616,842	-		DZA65_RS07760	0.72	+0.1
1,616,842	-		DZA65_RS07760	0.72	-0.3
1,616,842	-		DZA65_RS07760	0.72	-1.3
1,616,842	-		DZA65_RS07760	0.72	-0.1
1,616,842	-		DZA65_RS07760	0.72	-0.4
1,616,842	-		DZA65_RS07760	0.72	+1.1
1,616,842	-		DZA65_RS07760	0.72	-0.5
1,616,915	-		DZA65_RS07760	0.82	-1.0
1,616,935	+		DZA65_RS07760	0.85	-0.2
1,616,935	+		DZA65_RS07760	0.85	-1.7
1,616,935	+		DZA65_RS07760	0.85	+1.7
1,616,935	+		DZA65_RS07760	0.85	-0.9
1,616,935	+		DZA65_RS07760	0.85	-0.8
1,616,935	+		DZA65_RS07760	0.85	+0.3
1,616,935	+		DZA65_RS07760	0.85	-0.1
1,616,935	+		DZA65_RS07760	0.85	-0.8
1,616,936	-		DZA65_RS07760	0.85	-0.1
1,616,936	-		DZA65_RS07760	0.85	-0.4
1,616,936	-		DZA65_RS07760	0.85	-1.4
1,616,936	-		DZA65_RS07760	0.85	-1.1
1,616,962	+		DZA65_RS07760	0.89	+0.2
1,616,963	-		DZA65_RS07760	0.89	+0.5
1,616,963	-		DZA65_RS07760	0.89	+0.3
1,617,200	+				-0.1