Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS07650

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,591,375	+		DZA65_RS07640	0.69	+0.2
1,591,376	-		DZA65_RS07640	0.69	-0.1
1,591,414	+		DZA65_RS07640	0.75	-2.0
1,591,470	+		DZA65_RS07640	0.83	-1.0
1,591,471	-		DZA65_RS07640	0.84	+0.2
1,591,478	-		DZA65_RS07640	0.85	-1.2
1,591,604	-				+0.3
1,591,721	+		DZA65_RS07645	0.32	+0.9
1,591,769	+		DZA65_RS07645	0.52	-1.5
1,591,770	-		DZA65_RS07645	0.53	+0.7
1,591,857	+				+0.3
1,591,857	+				+1.5
1,591,858	-				-0.8
1,591,858	-				-0.1
1,591,858	-				-0.8
1,591,864	+				-1.2
1,591,864	+				-0.4
1,591,864	+				+0.2
1,591,864	+				-1.1
1,591,864	+				-1.1
1,591,864	+				+0.1
1,591,864	+				-1.5
1,591,865	-				+0.9
1,591,865	-				-0.6
1,591,865	-				-1.3
1,591,884	-				+0.3
1,591,905	+				+0.6
1,591,905	+				+0.1
1,591,906	-				+0.7
1,591,906	-				-0.1
1,591,922	-				-0.2
1,591,995	+				+0.2
1,592,014	+				-0.1
1,592,015	-				-0.5
1,592,015	-				-0.3
1,592,015	-				-0.5
1,592,021	-				+0.3
1,592,021	-				-0.4
1,592,021	-				+0.0
1,592,048	-				-0.0
1,592,048	-				+1.0
1,592,096	+				+0.2
1,592,096	+				-0.6
1,592,097	-				+0.4
1,592,097	-				+1.2
1,592,136	+				+0.5
1,592,200	-				-1.0
1,592,224	-				-0.6
1,592,227	+				-1.1
1,592,227	+				+1.5
1,592,227	+				-2.1
1,592,228	-				-0.2
1,592,228	-				-0.3
1,592,228	-				-0.7
1,592,228	-				-0.2
1,592,266	+				-3.3
1,592,268	+				-0.1
1,592,268	+				-0.8
1,592,269	-				-1.4
1,592,269	-				+0.9
1,592,323	+				+0.3
1,592,323	+				-0.8
1,592,336	-				-0.6
1,592,363	-				-0.5
1,592,413	+				-0.3
1,592,427	+				-1.8
1,592,528	-				-1.7
1,592,546	+		DZA65_RS07650	0.11	-0.1
1,592,557	-		DZA65_RS07650	0.12	+0.2
1,592,735	+		DZA65_RS07650	0.22	+0.7
1,592,739	+		DZA65_RS07650	0.22	-2.1
1,592,775	+		DZA65_RS07650	0.24	-0.7
1,592,791	+		DZA65_RS07650	0.25	+0.5
1,592,791	+		DZA65_RS07650	0.25	-0.2
1,592,792	-		DZA65_RS07650	0.25	-0.4
1,592,940	+		DZA65_RS07650	0.34	-0.4
1,592,944	+		DZA65_RS07650	0.34	+0.8
1,592,964	+		DZA65_RS07650	0.35	-0.0
1,593,072	-		DZA65_RS07650	0.41	-0.9
1,593,072	-		DZA65_RS07650	0.41	+0.9
1,593,100	+		DZA65_RS07650	0.43	+0.5
1,593,216	+		DZA65_RS07650	0.50	-1.1
1,593,217	-		DZA65_RS07650	0.50	+0.7
1,593,217	-		DZA65_RS07650	0.50	-0.1
1,593,226	-		DZA65_RS07650	0.50	+0.7
1,593,326	-		DZA65_RS07650	0.56	+0.1
1,593,326	-		DZA65_RS07650	0.56	-0.5
1,593,364	+		DZA65_RS07650	0.58	-0.7
1,593,407	-		DZA65_RS07650	0.61	-0.5
1,593,443	-		DZA65_RS07650	0.63	+0.5
1,593,447	+		DZA65_RS07650	0.63	-0.5
1,593,499	-		DZA65_RS07650	0.66	-1.0
1,593,531	-		DZA65_RS07650	0.68	-0.1
1,593,537	+		DZA65_RS07650	0.68	+0.9
1,593,538	-		DZA65_RS07650	0.68	-0.5
1,593,538	-		DZA65_RS07650	0.68	-0.3
1,593,607	+		DZA65_RS07650	0.72	-0.5
1,593,626	-		DZA65_RS07650	0.73	+0.2
1,593,679	-		DZA65_RS07650	0.77	-0.7
1,593,955	-				+0.5
1,594,025	-				+0.1
1,594,082	+				-1.4
1,594,091	+				-1.7
1,594,108	+				+0.7
1,594,252	+				-0.3
1,594,252	+				+0.3
1,594,257	-				-0.5
1,594,295	-				-0.1
1,594,346	+				+0.3
1,594,347	-				+1.5
1,594,359	+				-0.8
1,594,359	+				-0.4
1,594,360	-				-0.1
1,594,396	-				-1.1
1,594,480	+		DZA65_RS07655	0.49	+0.1
1,594,485	+		DZA65_RS07655	0.51	-1.0
1,594,485	+		DZA65_RS07655	0.51	+0.8
1,594,485	+		DZA65_RS07655	0.51	+1.5
1,594,485	+		DZA65_RS07655	0.51	-0.8
1,594,485	+		DZA65_RS07655	0.51	-0.3
1,594,486	-		DZA65_RS07655	0.52	+1.5
1,594,486	-		DZA65_RS07655	0.52	-0.4
1,594,486	-				+0.5
1,594,496	+		DZA65_RS07655	0.57	-0.6
1,594,496	+		DZA65_RS07655	0.57	+0.9
1,594,496	+		DZA65_RS07655	0.57	-0.5
1,594,496	+		DZA65_RS07655	0.57	+0.4
1,594,496	+		DZA65_RS07655	0.57	-1.3
1,594,509	-		DZA65_RS07655	0.63	-0.8
1,594,551	-		DZA65_RS07655	0.84	+0.1
1,594,943	-		DZA65_RS07660	0.63	+0.2
1,594,960	+		DZA65_RS07660	0.66	+1.1
1,594,960	+		DZA65_RS07660	0.66	-0.7
1,594,961	-		DZA65_RS07660	0.66	+1.9
1,594,961	-		DZA65_RS07660	0.66	+1.7
1,595,017	-		DZA65_RS07660	0.76	-0.7
1,595,053	+		DZA65_RS07660	0.82	-0.1
1,595,054	-		DZA65_RS07660	0.82	+0.2