Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS07565

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,577,706	+				-0.0
1,577,706	+				-0.7
1,577,812	+				-0.3
1,577,956	-				+1.5
1,577,958	-				+0.5
1,577,958	-				-0.1
1,578,050	+				-0.5
1,578,138	+		DZA65_RS07560	0.18	+0.2
1,578,175	+		DZA65_RS07560	0.34	-1.7
1,578,175	+		DZA65_RS07560	0.34	+1.5
1,578,179	-		DZA65_RS07560	0.35	+0.6
1,578,227	+		DZA65_RS07560	0.56	-1.5
1,578,277	-		DZA65_RS07560	0.77	-1.4
1,578,330	-				+0.5
1,578,330	-				-0.5
1,578,347	+				-0.5
1,578,349	+				+0.7
1,578,405	+		DZA65_RS07565	0.23	-1.3
1,578,419	+		DZA65_RS07565	0.27	-1.6
1,578,553	-		DZA65_RS07565	0.70	-0.1
1,578,553	-		DZA65_RS07565	0.70	-1.2
1,578,553	-		DZA65_RS07565	0.70	-1.7
1,578,553	-		DZA65_RS07565	0.70	-0.5
1,578,553	-		DZA65_RS07565	0.70	-0.7
1,578,724	+				+0.1
1,578,749	-				-0.9
1,578,781	+				-0.1
1,578,782	-				-1.5
1,578,847	+				-2.5
1,578,847	+				-1.1
1,578,848	-				-0.9
1,578,848	-				-0.8
1,578,848	-				+0.7
1,578,848	-				-0.1
1,578,848	-				+0.9
1,578,848	-				+1.5
1,578,880	+				-0.3
1,578,880	+				-0.7
1,578,880	+				+0.7
1,578,881	-				-0.2
1,578,900	+				-1.2
1,578,900	+				-0.6
1,578,901	-				+1.3
1,578,906	+				-0.2
1,578,906	+				-0.0
1,578,907	-				-0.1
1,578,909	+				+0.7
1,578,909	+				+0.2
1,578,909	+				-1.1
1,578,909	+				+1.1
1,578,913	+				-1.0
1,578,913	+				+1.5
1,578,914	-				+1.9
1,578,914	-				-1.7
1,578,941	+				-0.1
1,578,941	+				+0.3
1,578,941	+				-0.5
1,578,942	-				+1.2
1,578,942	-				-0.6
1,578,953	+				-0.4
1,578,954	-				-1.7
1,578,983	+				-0.8
1,578,983	+				-0.1
1,578,984	-				+0.2
1,578,984	-				+0.9
1,578,984	-				-1.1
1,579,067	+				-1.4
1,579,068	-				+0.1
1,579,068	-				+0.7
1,579,068	-				-2.3
1,579,068	-				-0.3
1,579,068	-				-1.1
1,579,071	+				+1.5
1,579,071	+				-0.5
1,579,071	+				-0.1
1,579,071	+				-0.5
1,579,071	+				+1.2
1,579,071	+				-0.8
1,579,071	+				-0.6
1,579,071	+				-1.0
1,579,072	-				-0.6
1,579,072	-				-0.4
1,579,072	-				+0.5
1,579,072	-				+0.7
1,579,072	-				-0.8
1,579,072	-				-0.1
1,579,072	-				+0.9
1,579,072	-				-0.1
1,579,072	-				+1.5
1,579,072	-				-1.1
1,579,085	+				-1.0
1,579,159	+				-0.1
1,579,160	-				-0.6
1,579,167	+				-0.4
1,579,168	-				+2.5
1,579,168	-				+2.2
1,579,168	-				+0.6
1,579,184	-				-1.0
1,579,198	+				+1.6
1,579,198	+				-0.5
1,579,217	+		DZA65_RS07575	0.11	-1.3
1,579,268	+		DZA65_RS07575	0.18	-0.2
1,579,271	+		DZA65_RS07575	0.18	-1.4
1,579,271	+		DZA65_RS07575	0.18	-0.1
1,579,391	-		DZA65_RS07575	0.34	-0.7
1,579,484	+		DZA65_RS07575	0.45	+0.5
1,579,484	+		DZA65_RS07575	0.45	-1.4
1,579,511	-		DZA65_RS07575	0.49	+1.2
1,579,571	+		DZA65_RS07575	0.57	+0.9
1,579,600	-		DZA65_RS07575	0.60	-0.6
1,579,600	-		DZA65_RS07575	0.60	-0.6
1,579,601	+		DZA65_RS07575	0.60	-1.3