Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS07520

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,561,287	-		DZA65_RS07515	0.19	-1.7
1,561,294	-		DZA65_RS07515	0.20	-0.1
1,561,300	+				+0.5
1,561,300	+		DZA65_RS07515	0.20	-0.4
1,561,301	-		DZA65_RS07515	0.20	-0.6
1,561,343	+		DZA65_RS07515	0.24	-1.8
1,561,345	+		DZA65_RS07515	0.24	-0.7
1,561,345	+		DZA65_RS07515	0.24	-2.1
1,561,345	+		DZA65_RS07515	0.24	+0.5
1,561,346	-		DZA65_RS07515	0.24	+1.2
1,561,346	-		DZA65_RS07515	0.24	-0.8
1,561,346	-		DZA65_RS07515	0.24	-0.4
1,561,414	+		DZA65_RS07515	0.30	+0.7
1,561,414	+		DZA65_RS07515	0.30	-0.2
1,561,414	+		DZA65_RS07515	0.30	-0.9
1,561,414	+		DZA65_RS07515	0.30	+0.3
1,561,414	+		DZA65_RS07515	0.30	-0.4
1,561,415	-		DZA65_RS07515	0.30	-0.4
1,561,415	-		DZA65_RS07515	0.30	+0.2
1,561,430	+		DZA65_RS07515	0.31	+0.7
1,561,431	-		DZA65_RS07515	0.31	-0.1
1,561,431	-		DZA65_RS07515	0.31	-0.7
1,561,526	+		DZA65_RS07515	0.39	-0.7
1,561,526	+		DZA65_RS07515	0.39	+0.9
1,561,587	+		DZA65_RS07515	0.44	-2.0
1,561,598	-		DZA65_RS07515	0.45	-0.5
1,561,629	+		DZA65_RS07515	0.48	+0.2
1,561,629	+		DZA65_RS07515	0.48	-2.0
1,561,629	+		DZA65_RS07515	0.48	+0.9
1,561,629	+		DZA65_RS07515	0.48	-0.0
1,561,630	-		DZA65_RS07515	0.48	+0.9
1,561,630	-		DZA65_RS07515	0.48	+0.2
1,561,636	+		DZA65_RS07515	0.48	-2.0
1,561,636	+		DZA65_RS07515	0.48	+0.5
1,561,636	+				-0.8
1,561,689	+		DZA65_RS07515	0.53	-0.4
1,561,689	+		DZA65_RS07515	0.53	-1.0
1,561,690	-		DZA65_RS07515	0.53	-0.0
1,561,690	-		DZA65_RS07515	0.53	-2.0
1,561,690	-		DZA65_RS07515	0.53	-0.5
1,561,690	-		DZA65_RS07515	0.53	-0.2
1,561,690	-		DZA65_RS07515	0.53	-0.1
1,561,690	-		DZA65_RS07515	0.53	+0.9
1,561,712	-		DZA65_RS07515	0.55	-0.7
1,561,712	-		DZA65_RS07515	0.55	-1.0
1,561,712	-		DZA65_RS07515	0.55	-2.0
1,561,712	-		DZA65_RS07515	0.55	-1.5
1,561,726	+		DZA65_RS07515	0.56	+0.1
1,561,726	+		DZA65_RS07515	0.56	+0.8
1,561,726	+		DZA65_RS07515	0.56	-2.8
1,561,727	-		DZA65_RS07515	0.56	-1.5
1,561,727	-		DZA65_RS07515	0.56	+1.2
1,561,773	+		DZA65_RS07515	0.60	-1.0
1,561,773	+		DZA65_RS07515	0.60	+0.7
1,561,775	+		DZA65_RS07515	0.60	+0.1
1,561,775	+		DZA65_RS07515	0.60	-0.7
1,561,775	+		DZA65_RS07515	0.60	+0.2
1,561,776	-		DZA65_RS07515	0.60	+0.0
1,561,776	-		DZA65_RS07515	0.60	+1.3
1,561,787	-		DZA65_RS07515	0.61	-1.3
1,561,787	-		DZA65_RS07515	0.61	+1.1
1,561,854	+		DZA65_RS07515	0.66	+0.7
1,561,854	+		DZA65_RS07515	0.66	+0.4
1,561,855	-		DZA65_RS07515	0.66	-1.0
1,561,868	+		DZA65_RS07515	0.68	-0.3
1,561,869	-		DZA65_RS07515	0.68	-2.8
1,561,869	-		DZA65_RS07515	0.68	+0.1
1,561,890	+		DZA65_RS07515	0.69	-0.5
1,561,890	+		DZA65_RS07515	0.69	+0.3
1,561,890	+		DZA65_RS07515	0.69	+0.5
1,561,891	-		DZA65_RS07515	0.70	-0.3
1,561,891	-		DZA65_RS07515	0.70	-0.1
1,561,891	-		DZA65_RS07515	0.70	-0.3
1,561,892	+		DZA65_RS07515	0.70	-0.6
1,561,893	-		DZA65_RS07515	0.70	-0.0
1,561,893	-		DZA65_RS07515	0.70	+0.1
1,561,910	+		DZA65_RS07515	0.71	+0.3
1,561,931	-		DZA65_RS07515	0.73	+0.2
1,561,945	+		DZA65_RS07515	0.74	-0.5
1,561,950	+		DZA65_RS07515	0.74	-1.7
1,561,950	+		DZA65_RS07515	0.74	-0.0
1,561,951	-		DZA65_RS07515	0.75	-1.0
1,561,951	-		DZA65_RS07515	0.75	+0.2
1,562,016	+		DZA65_RS07515	0.80	+0.1
1,562,016	+		DZA65_RS07515	0.80	+1.5
1,562,016	+		DZA65_RS07515	0.80	-0.5
1,562,016	+		DZA65_RS07515	0.80	+0.8
1,562,016	+		DZA65_RS07515	0.80	+0.5
1,562,016	+		DZA65_RS07515	0.80	-1.4
1,562,016	+		DZA65_RS07515	0.80	-0.8
1,562,016	+		DZA65_RS07515	0.80	-1.0
1,562,017	-		DZA65_RS07515	0.80	-1.1
1,562,017	-		DZA65_RS07515	0.80	+0.2
1,562,017	-		DZA65_RS07515	0.80	-1.3
1,562,017	-		DZA65_RS07515	0.80	+0.2
1,562,017	-		DZA65_RS07515	0.80	+0.6
1,562,017	-				-0.5
1,562,017	-		DZA65_RS07515	0.80	-0.3
1,562,017	-		DZA65_RS07515	0.80	-0.8
1,562,017	-		DZA65_RS07515	0.80	+2.2
1,562,017	-		DZA65_RS07515	0.80	-0.3
1,562,017	-		DZA65_RS07515	0.80	-1.1
1,562,017	-		DZA65_RS07515	0.80	-0.5
1,562,036	+		DZA65_RS07515	0.82	-0.8
1,562,036	+		DZA65_RS07515	0.82	-1.3
1,562,036	+		DZA65_RS07515	0.82	-0.5
1,562,212	+				-0.1
1,562,212	+				-0.3
1,562,225	-				+0.0
1,562,256	+				-1.4
1,562,256	+				-1.1
1,562,257	-				+0.3
1,562,257	-				-0.1
1,562,257	-				-1.1
1,562,391	-		DZA65_RS07520	0.19	-0.8
1,562,391	-		DZA65_RS07520	0.19	-0.7
1,562,411	+		DZA65_RS07520	0.22	-1.7
1,562,411	+		DZA65_RS07520	0.22	-2.1
1,562,411	+		DZA65_RS07520	0.22	-1.8
1,562,412	-		DZA65_RS07520	0.22	+0.1
1,562,412	-		DZA65_RS07520	0.22	+0.5
1,562,412	-		DZA65_RS07520	0.22	-0.1
1,562,412	-		DZA65_RS07520	0.22	+2.1
1,562,412	-		DZA65_RS07520	0.22	-0.8
1,562,434	-		DZA65_RS07520	0.26	-1.7
1,562,434	-		DZA65_RS07520	0.26	-1.0
1,562,440	-		DZA65_RS07520	0.27	-0.9
1,562,459	-		DZA65_RS07520	0.29	+0.2
1,562,512	+		DZA65_RS07520	0.37	+0.9
1,562,512	+		DZA65_RS07520	0.37	-1.8
1,562,512	+		DZA65_RS07520	0.37	+0.3
1,562,513	-		DZA65_RS07520	0.37	-1.8
1,562,513	-		DZA65_RS07520	0.37	+0.9
1,562,513	-		DZA65_RS07520	0.37	+0.8
1,562,513	-		DZA65_RS07520	0.37	+1.5
1,562,513	-		DZA65_RS07520	0.37	+0.2
1,562,515	+		DZA65_RS07520	0.37	-0.3
1,562,515	+		DZA65_RS07520	0.37	-0.1
1,562,515	+		DZA65_RS07520	0.37	-1.1
1,562,516	-		DZA65_RS07520	0.38	-1.1
1,562,516	-		DZA65_RS07520	0.38	-0.3
1,562,527	-		DZA65_RS07520	0.39	+0.4
1,562,610	+		DZA65_RS07520	0.51	-0.1
1,562,611	-		DZA65_RS07520	0.51	-0.9
1,562,663	-		DZA65_RS07520	0.59	-0.8
1,562,672	+		DZA65_RS07520	0.60	+0.4
1,562,672	+		DZA65_RS07520	0.60	-1.0
1,562,672	+		DZA65_RS07520	0.60	+0.1
1,562,673	-		DZA65_RS07520	0.60	-1.2
1,562,686	-		DZA65_RS07520	0.62	-2.3
1,562,719	+		DZA65_RS07520	0.67	+0.1
1,562,720	-		DZA65_RS07520	0.67	-0.8
1,562,720	-		DZA65_RS07520	0.67	-0.7
1,562,720	-		DZA65_RS07520	0.67	-1.4
1,562,721	+		DZA65_RS07520	0.67	-0.7
1,562,722	-		DZA65_RS07520	0.67	-0.3
1,562,746	-		DZA65_RS07520	0.71	-0.3
1,562,746	-		DZA65_RS07520	0.71	-0.6
1,562,756	+		DZA65_RS07520	0.72	-0.1
1,562,757	-		DZA65_RS07520	0.72	+1.2
1,562,786	-		DZA65_RS07520	0.77	-2.0
1,562,786	-		DZA65_RS07520	0.77	+0.5
1,562,786	-		DZA65_RS07520	0.77	-2.8
1,562,786	-		DZA65_RS07520	0.77	+1.2
1,562,786	-		DZA65_RS07520	0.77	-1.8
1,562,845	-		DZA65_RS07520	0.85	-0.9
1,562,860	-		DZA65_RS07520	0.87	-0.1
1,562,878	-				-0.1
1,562,929	-				-0.1
1,562,937	+				-1.7
1,562,938	-				-0.3
1,562,945	-				-0.8
1,562,994	-				-1.7
1,562,994	-				-0.5
1,563,009	-				-0.1
1,563,065	-				-0.7
1,563,120	+		DZA65_RS07525	0.10	-1.6
1,563,120	+		DZA65_RS07525	0.10	+1.9
1,563,145	+		DZA65_RS07525	0.13	+1.8
1,563,321	+		DZA65_RS07525	0.31	+0.5
1,563,322	-		DZA65_RS07525	0.31	-0.3
1,563,373	-		DZA65_RS07525	0.36	+0.3
1,563,403	+		DZA65_RS07525	0.39	+0.3
1,563,403	+		DZA65_RS07525	0.39	+1.7
1,563,630	+		DZA65_RS07525	0.63	+1.1
1,563,699	+		DZA65_RS07525	0.70	-0.1
1,563,700	-		DZA65_RS07525	0.70	-1.7
1,563,745	+		DZA65_RS07525	0.74	-1.5
1,563,756	-		DZA65_RS07525	0.76	-0.8
1,563,786	-		DZA65_RS07525	0.79	+0.3
1,563,786	-		DZA65_RS07525	0.79	+0.3
1,563,805	+		DZA65_RS07525	0.81	+0.2
1,563,806	-		DZA65_RS07525	0.81	+0.7
1,563,806	-		DZA65_RS07525	0.81	-1.5
1,563,806	-		DZA65_RS07525	0.81	-0.1
1,563,806	-		DZA65_RS07525	0.81	+2.7
1,563,806	-		DZA65_RS07525	0.81	+0.3
1,563,808	+		DZA65_RS07525	0.81	-0.1
1,563,808	+		DZA65_RS07525	0.81	+0.3
1,563,808	+		DZA65_RS07525	0.81	-0.3
1,563,808	+		DZA65_RS07525	0.81	-0.5
1,563,808	+		DZA65_RS07525	0.81	+0.2
1,563,809	-		DZA65_RS07525	0.81	+1.5
1,563,809	-		DZA65_RS07525	0.81	-1.8
1,563,809	-		DZA65_RS07525	0.81	+0.3
1,563,809	-		DZA65_RS07525	0.81	-1.0
1,563,809	-		DZA65_RS07525	0.81	+0.7
1,563,809	-		DZA65_RS07525	0.81	+0.1
1,563,810	+		DZA65_RS07525	0.81	+1.3
1,563,810	+		DZA65_RS07525	0.81	+0.9
1,563,811	-		DZA65_RS07525	0.81	+0.5
1,563,844	-		DZA65_RS07525	0.85	-0.3
1,563,913	+				+0.2
1,563,913	+				-1.1
1,563,913	+				-1.2
1,563,914	-				-0.1
1,563,914	-				-0.3
1,563,914	-				-0.1
1,563,914	-				-0.4
1,563,914	-				-0.8
1,563,933	+				-0.5
1,563,933	+				+0.1
1,563,933	+				+0.2
1,563,933	+				-0.3
1,563,933	+				-2.1
1,563,933	+				+0.1
1,563,934	-				-0.3
1,563,934	-				+0.2