Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS07435

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,545,015	+		DZA65_RS07425	0.68	-0.3
1,545,016	-		DZA65_RS07425	0.68	-0.6
1,545,016	-		DZA65_RS07425	0.68	+0.8
1,545,016	-		DZA65_RS07425	0.68	-1.0
1,545,016	-		DZA65_RS07425	0.68	+1.1
1,545,076	+		DZA65_RS07425	0.72	+0.3
1,545,091	+		DZA65_RS07425	0.73	-0.6
1,545,091	+		DZA65_RS07425	0.73	-2.0
1,545,127	+		DZA65_RS07425	0.75	-1.7
1,545,127	+		DZA65_RS07425	0.75	-2.0
1,545,128	-		DZA65_RS07425	0.75	-1.3
1,545,194	+		DZA65_RS07425	0.78	-1.1
1,545,195	-		DZA65_RS07425	0.78	-0.5
1,545,195	-		DZA65_RS07425	0.78	-0.8
1,545,232	+		DZA65_RS07425	0.81	-0.6
1,545,232	+		DZA65_RS07425	0.81	+0.5
1,545,232	+		DZA65_RS07425	0.81	-2.0
1,545,233	-		DZA65_RS07425	0.81	-0.1
1,545,233	-		DZA65_RS07425	0.81	-2.2
1,545,259	+		DZA65_RS07425	0.82	-0.5
1,545,260	-		DZA65_RS07425	0.82	+0.5
1,545,266	-		DZA65_RS07425	0.83	+0.9
1,545,292	+		DZA65_RS07425	0.84	+0.5
1,545,292	+		DZA65_RS07425	0.84	-0.3
1,545,292	+		DZA65_RS07425	0.84	-2.1
1,545,292	+		DZA65_RS07425	0.84	-1.3
1,545,293	-		DZA65_RS07425	0.84	+0.0
1,545,293	-		DZA65_RS07425	0.84	-0.8
1,545,400	+				+0.0
1,545,400	+				-0.3
1,545,401	-				-1.8
1,545,401	-				+1.5
1,545,401	-				+0.9
1,545,401	-				-0.9
1,545,413	+				-0.8
1,545,414	-				+0.9
1,545,414	-				-0.5
1,545,544	-				-0.2
1,545,554	-				+0.1
1,545,571	+				+0.2
1,545,571	+				-0.4
1,545,572	-				-0.0
1,545,573	+				-0.6
1,545,573	+				-2.8
1,545,574	-				-0.4
1,545,574	-				-2.9
1,545,574	-				+1.5
1,545,586	+				+0.8
1,545,586	+				+1.5
1,545,586	+				-1.1
1,545,587	-				-0.9
1,545,587	-				-0.2
1,545,587	-				+0.3
1,545,587	-				+0.1
1,545,603	+				-0.6
1,545,603	+				-0.7
1,545,603	+				-1.2
1,545,603	+				-0.8
1,545,603	+				+1.5
1,545,604	-				-1.0
1,545,604	-				-1.3
1,545,604	-				+1.1
1,545,604	-				-0.9
1,545,606	+				-0.1
1,545,606	+				-1.3
1,545,606	+				-0.8
1,545,606	+				+0.8
1,545,795	+		DZA65_RS07430	0.57	-0.8
1,545,795	+		DZA65_RS07430	0.57	-0.7
1,545,795	+				+0.9
1,545,796	-		DZA65_RS07430	0.57	-0.5
1,545,796	-		DZA65_RS07430	0.57	-0.5
1,545,796	-		DZA65_RS07430	0.57	+1.8
1,545,796	-		DZA65_RS07430	0.57	-2.2
1,545,829	+		DZA65_RS07430	0.66	-0.5
1,545,829	+		DZA65_RS07430	0.66	+1.7
1,545,829	+		DZA65_RS07430	0.66	+0.2
1,545,829	+		DZA65_RS07430	0.66	-1.9
1,545,829	+		DZA65_RS07430	0.66	-1.5
1,545,830	-		DZA65_RS07430	0.66	-1.1
1,545,830	-		DZA65_RS07430	0.66	-0.8
1,545,901	+		DZA65_RS07430	0.86	+1.1
1,545,901	+		DZA65_RS07430	0.86	-0.9
1,545,901	+		DZA65_RS07430	0.86	-0.5
1,545,901	+		DZA65_RS07430	0.86	+0.5
1,545,901	+		DZA65_RS07430	0.86	+1.1
1,545,901	+		DZA65_RS07430	0.86	-0.8
1,545,902	-		DZA65_RS07430	0.86	+0.6
1,545,902	-		DZA65_RS07430	0.86	-0.2
1,545,902	-				+0.8
1,545,909	+		DZA65_RS07430	0.88	+0.5
1,545,909	+		DZA65_RS07430	0.88	-1.9
1,545,981	+				+0.2
1,545,983	+				+0.6
1,546,005	-				-0.5
1,546,065	+		DZA65_RS07435	0.19	-0.8
1,546,066	-		DZA65_RS07435	0.19	-0.5
1,546,066	-		DZA65_RS07435	0.19	-0.4
1,546,084	-		DZA65_RS07435	0.24	-1.5
1,546,125	-		DZA65_RS07435	0.36	-0.8
1,546,125	-		DZA65_RS07435	0.36	-0.1
1,546,176	+		DZA65_RS07435	0.50	-2.0
1,546,177	-		DZA65_RS07435	0.51	-1.2
1,546,284	+		DZA65_RS07435	0.81	-0.3
1,546,284	+		DZA65_RS07435	0.81	-0.1
1,546,285	-		DZA65_RS07435	0.81	-0.8
1,546,291	-		DZA65_RS07435	0.83	-0.7
1,546,292	+		DZA65_RS07435	0.83	-1.1
1,546,342	-				-0.3
1,546,351	-				-1.1
1,546,351	-				+1.2
1,546,351	-				-1.5
1,546,369	-				+0.3
1,546,451	+				-1.3
1,546,452	-				+1.3
1,546,458	+				-0.5
1,546,458	+				+0.0
1,546,458	+				-0.7
1,546,459	-				-0.5
1,546,480	+				+0.2
1,546,496	+				-0.5
1,546,496	+				+0.1
1,546,496	+				-0.2
1,546,497	-				+0.5
1,546,497	-				-1.3
1,546,530	+				+0.2
1,546,530	+				-1.2
1,546,533	+				-0.8
1,546,533	+				-0.8
1,546,555	-				-0.1
1,546,568	-				-2.2
1,546,568	-				-1.7
1,546,571	+				-0.7
1,546,571	+				-1.3
1,546,571	+				+1.8
1,546,572	-				+0.7
1,546,572	-				-0.7
1,546,572	-				-0.8
1,546,596	+				+0.5
1,546,596	+				-2.1
1,546,596	+				-0.1
1,546,596	+				-0.1
1,546,596	+				-0.5
1,546,597	-				-0.8
1,546,621	+				-0.1
1,546,621	+				-1.8
1,546,622	-				-1.2
1,546,640	-				-0.3
1,546,677	-				+0.3
1,546,684	+				-0.5
1,546,914	+		DZA65_RS07440	0.27	-1.8
1,547,319	-		DZA65_RS07440	0.75	-0.9