Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS07285

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,513,672	+		DZA65_RS07275	0.59	-1.4
1,513,878	+		DZA65_RS07275	0.82	-0.0
1,513,878	+		DZA65_RS07275	0.82	+0.3
1,513,951	+		DZA65_RS07275	0.90	-2.0
1,513,951	+		DZA65_RS07275	0.90	-0.5
1,513,951	+		DZA65_RS07275	0.90	+0.9
1,513,951	+		DZA65_RS07275	0.90	-1.3
1,513,952	-		DZA65_RS07275	0.90	-1.8
1,513,952	-		DZA65_RS07275	0.90	-0.5
1,513,952	-		DZA65_RS07275	0.90	-1.5
1,513,981	+				+0.5
1,513,981	+				-0.4
1,513,981	+				-0.5
1,513,981	+				-0.4
1,513,981	+				+0.7
1,513,981	+				+1.2
1,513,982	-				+0.2
1,513,982	-				-1.1
1,513,982	-				-0.1
1,513,982	-				+0.8
1,513,982	-				-1.4
1,513,982	-				-0.2
1,513,982	-				-0.5
1,514,011	+				-0.5
1,514,012	-				+1.9
1,514,012	-				-0.2
1,514,037	+				-1.3
1,514,038	-				-0.7
1,514,038	-				+0.2
1,514,040	+				-0.7
1,514,040	+				-1.5
1,514,040	+				-0.5
1,514,040	+				+0.3
1,514,040	+				-1.5
1,514,041	-				-0.5
1,514,041	-				-0.6
1,514,041	-				-0.3
1,514,041	-				+1.5
1,514,041	-				-0.2
1,514,041	-				+0.9
1,514,041	-				+0.3
1,514,169	+		DZA65_RS07280	0.23	-2.3
1,514,169	+		DZA65_RS07280	0.23	+0.2
1,514,221	-		DZA65_RS07280	0.32	-0.1
1,514,228	+		DZA65_RS07280	0.33	-0.8
1,514,229	-		DZA65_RS07280	0.33	-1.9
1,514,239	+		DZA65_RS07280	0.34	+0.5
1,514,239	+		DZA65_RS07280	0.34	-1.5
1,514,253	-		DZA65_RS07280	0.37	-0.5
1,514,253	-		DZA65_RS07280	0.37	+0.6
1,514,274	-		DZA65_RS07280	0.40	+0.2
1,514,274	-		DZA65_RS07280	0.40	+0.2
1,514,434	+		DZA65_RS07280	0.66	+0.4
1,514,435	-		DZA65_RS07280	0.66	-1.1
1,514,435	-		DZA65_RS07280	0.66	+0.4
1,514,435	-		DZA65_RS07280	0.66	-0.2
1,514,435	-		DZA65_RS07280	0.66	-0.1
1,514,456	+		DZA65_RS07280	0.70	+0.2
1,514,518	+		DZA65_RS07280	0.80	-1.3
1,514,518	+		DZA65_RS07280	0.80	+0.6
1,514,519	-		DZA65_RS07280	0.80	+0.9
1,514,519	-		DZA65_RS07280	0.80	+0.5
1,514,519	-		DZA65_RS07280	0.80	-0.9
1,514,563	+		DZA65_RS07280	0.87	-0.7
1,514,623	+				-0.3
1,514,624	-				-0.6
1,514,624	-				-0.4
1,514,624	-				-2.1
1,514,624	-				+0.1
1,514,625	+				-2.1
1,514,664	+				-1.9
1,514,664	+				-0.2
1,514,790	+		DZA65_RS07285	0.13	+0.5
1,514,825	+		DZA65_RS07285	0.16	+0.5
1,514,826	-		DZA65_RS07285	0.16	-0.9
1,514,842	-		DZA65_RS07285	0.18	+0.3
1,514,947	-		DZA65_RS07285	0.27	-0.5
1,514,953	+		DZA65_RS07285	0.27	-0.1
1,514,954	-		DZA65_RS07285	0.27	-1.3
1,514,954	-		DZA65_RS07285	0.27	+1.5
1,514,975	+		DZA65_RS07285	0.29	-0.7
1,514,988	+		DZA65_RS07285	0.30	-0.6
1,514,988	+		DZA65_RS07285	0.30	+0.1
1,514,989	-		DZA65_RS07285	0.30	-0.3
1,514,989	-		DZA65_RS07285	0.30	+0.9
1,515,104	+		DZA65_RS07285	0.40	-3.2
1,515,104	+		DZA65_RS07285	0.40	+0.1
1,515,104	+		DZA65_RS07285	0.40	-0.8
1,515,104	+		DZA65_RS07285	0.40	-0.4
1,515,105	-		DZA65_RS07285	0.40	+0.4
1,515,114	-		DZA65_RS07285	0.41	+1.1
1,515,246	+		DZA65_RS07285	0.53	-1.1
1,515,260	+		DZA65_RS07285	0.54	+1.5
1,515,294	+		DZA65_RS07285	0.57	-0.1
1,515,294	+		DZA65_RS07285	0.57	+0.1
1,515,294	+		DZA65_RS07285	0.57	+0.9
1,515,294	+		DZA65_RS07285	0.57	-0.1
1,515,297	+		DZA65_RS07285	0.57	+0.7
1,515,297	+		DZA65_RS07285	0.57	+0.2
1,515,297	+				+2.1
1,515,298	-		DZA65_RS07285	0.57	-1.4
1,515,347	+		DZA65_RS07285	0.62	+0.2
1,515,347	+		DZA65_RS07285	0.62	-0.8
1,515,347	+		DZA65_RS07285	0.62	-1.1
1,515,347	+		DZA65_RS07285	0.62	-0.3
1,515,347	+		DZA65_RS07285	0.62	+0.5
1,515,348	-		DZA65_RS07285	0.62	-0.8
1,515,348	-		DZA65_RS07285	0.62	+0.5
1,515,348	-		DZA65_RS07285	0.62	-2.1
1,515,348	-		DZA65_RS07285	0.62	-1.1
1,515,369	-		DZA65_RS07285	0.63	+0.5
1,515,432	-		DZA65_RS07285	0.69	+0.3
1,515,446	+		DZA65_RS07285	0.70	+0.7
1,515,447	-		DZA65_RS07285	0.70	+0.5
1,515,447	-		DZA65_RS07285	0.70	-1.3
1,515,503	-		DZA65_RS07285	0.75	+0.5
1,515,503	-		DZA65_RS07285	0.75	-0.2
1,515,559	+		DZA65_RS07285	0.80	+0.8
1,515,588	+		DZA65_RS07285	0.83	-0.4
1,515,588	+		DZA65_RS07285	0.83	-0.2
1,515,588	+		DZA65_RS07285	0.83	-1.1
1,515,588	+		DZA65_RS07285	0.83	+0.0
1,515,589	-		DZA65_RS07285	0.83	+0.8
1,515,591	-		DZA65_RS07285	0.83	-0.3
1,515,615	+		DZA65_RS07285	0.85	+0.3
1,515,616	-		DZA65_RS07285	0.85	+1.1
1,515,616	-		DZA65_RS07285	0.85	-0.2
1,515,627	-		DZA65_RS07285	0.86	-1.7
1,515,660	+		DZA65_RS07285	0.89	+1.5
1,515,660	+		DZA65_RS07285	0.89	+0.2
1,515,671	+		DZA65_RS07285	0.90	+0.5
1,515,723	-				+0.2
1,515,790	-				-0.3
1,515,826	+				+0.2
1,515,827	-				-1.7
1,515,836	-				+0.1
1,515,836	-				-0.5
1,515,836	-				-0.5
1,515,850	-				+0.5
1,515,865	+				-0.2
1,515,872	+				-0.8
1,515,873	-				-0.8
1,515,873	-				-0.7
1,515,873	-				+0.6
1,515,876	-				-1.1
1,515,876	-				-1.0
1,515,879	+				-1.8
1,515,936	+				+2.1
1,515,960	-				-0.6
1,516,023	-				-0.9
1,516,077	-				+0.5
1,516,101	-				-0.8
1,516,148	-				-1.3
1,516,180	-				-0.3
1,516,248	+				+0.7
1,516,248	+				+1.8
1,516,264	+				+0.5
1,516,265	-				+0.3
1,516,303	-				-1.2
1,516,342	+		DZA65_RS07290	0.12	+0.1
1,516,343	-		DZA65_RS07290	0.12	+0.5
1,516,369	+		DZA65_RS07290	0.14	-0.5
1,516,369	+		DZA65_RS07290	0.14	-0.1
1,516,369	+		DZA65_RS07290	0.14	-1.7
1,516,369	+		DZA65_RS07290	0.14	-2.6
1,516,369	+		DZA65_RS07290	0.14	+0.7
1,516,369	+		DZA65_RS07290	0.14	-0.1
1,516,369	+		DZA65_RS07290	0.14	-0.8
1,516,370	-		DZA65_RS07290	0.14	-0.3
1,516,370	-		DZA65_RS07290	0.14	-0.1
1,516,370	-		DZA65_RS07290	0.14	-1.3
1,516,370	-		DZA65_RS07290	0.14	+0.3
1,516,370	-		DZA65_RS07290	0.14	+2.5
1,516,371	+		DZA65_RS07290	0.15	+0.5
1,516,371	+		DZA65_RS07290	0.15	-0.2
1,516,371	+		DZA65_RS07290	0.15	-1.5
1,516,371	+		DZA65_RS07290	0.15	-1.3
1,516,371	+		DZA65_RS07290	0.15	-0.7
1,516,371	+		DZA65_RS07290	0.15	+1.1
1,516,371	+		DZA65_RS07290	0.15	-1.7
1,516,372	-		DZA65_RS07290	0.15	+0.2
1,516,372	-		DZA65_RS07290	0.15	-0.7
1,516,372	-		DZA65_RS07290	0.15	-1.8
1,516,372	-		DZA65_RS07290	0.15	+0.2
1,516,372	-		DZA65_RS07290	0.15	-1.7
1,516,372	-		DZA65_RS07290	0.15	-0.8
1,516,372	-		DZA65_RS07290	0.15	-1.5
1,516,376	+		DZA65_RS07290	0.15	-1.3
1,516,376	+		DZA65_RS07290	0.15	-0.2
1,516,429	+		DZA65_RS07290	0.19	-0.5
1,516,429	+		DZA65_RS07290	0.19	+0.5
1,516,429	+		DZA65_RS07290	0.19	+0.7
1,516,429	+		DZA65_RS07290	0.19	+0.7
1,516,430	-		DZA65_RS07290	0.19	+0.8
1,516,430	-		DZA65_RS07290	0.19	+0.2
1,516,435	-		DZA65_RS07290	0.20	+2.5
1,516,499	+		DZA65_RS07290	0.24	-0.6
1,516,560	+		DZA65_RS07290	0.29	-0.8
1,516,561	-		DZA65_RS07290	0.29	-0.5
1,516,612	+		DZA65_RS07290	0.33	-0.3
1,516,612	+		DZA65_RS07290	0.33	-0.5
1,516,612	+		DZA65_RS07290	0.33	-0.5
1,516,613	-		DZA65_RS07290	0.33	-1.4
1,516,613	-		DZA65_RS07290	0.33	-0.8
1,516,613	-		DZA65_RS07290	0.33	-0.9
1,516,613	-		DZA65_RS07290	0.33	-1.5
1,516,614	+		DZA65_RS07290	0.33	+1.8
1,516,614	+		DZA65_RS07290	0.33	-0.8
1,516,614	+		DZA65_RS07290	0.33	-0.6
1,516,615	-		DZA65_RS07290	0.33	-0.8
1,516,615	-		DZA65_RS07290	0.33	-0.8
1,516,734	+		DZA65_RS07290	0.43	-0.8
1,516,734	+		DZA65_RS07290	0.43	+0.5
1,516,735	-		DZA65_RS07290	0.43	-1.5
1,516,735	-		DZA65_RS07290	0.43	-0.6
1,516,735	-		DZA65_RS07290	0.43	-1.7
1,516,735	-		DZA65_RS07290	0.43	-2.1