Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS07045

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,458,356	+		DZA65_RS07040	0.32	+0.2
1,458,356	+		DZA65_RS07040	0.32	-2.1
1,458,356	+		DZA65_RS07040	0.32	-1.5
1,458,356	+		DZA65_RS07040	0.32	-0.2
1,458,356	+		DZA65_RS07040	0.32	-0.9
1,458,356	+		DZA65_RS07040	0.32	-0.7
1,458,357	-		DZA65_RS07040	0.32	-0.7
1,458,357	-		DZA65_RS07040	0.32	+0.5
1,458,357	-		DZA65_RS07040	0.32	+0.8
1,458,357	-		DZA65_RS07040	0.32	-0.7
1,458,442	-		DZA65_RS07040	0.40	+0.5
1,458,442	-		DZA65_RS07040	0.40	+0.2
1,458,510	+		DZA65_RS07040	0.47	+0.1
1,458,510	+		DZA65_RS07040	0.47	-0.2
1,458,530	+		DZA65_RS07040	0.49	+0.5
1,458,530	+		DZA65_RS07040	0.49	+1.5
1,458,696	+		DZA65_RS07040	0.64	-1.0
1,458,697	-		DZA65_RS07040	0.64	-1.7
1,458,756	-		DZA65_RS07040	0.70	+0.5
1,458,791	+		DZA65_RS07040	0.73	-0.1
1,458,791	+		DZA65_RS07040	0.73	+0.3
1,458,792	-		DZA65_RS07040	0.73	-1.5
1,458,792	-		DZA65_RS07040	0.73	+0.5
1,458,792	-		DZA65_RS07040	0.73	-0.7
1,458,792	-		DZA65_RS07040	0.73	+0.1
1,458,792	-		DZA65_RS07040	0.73	-0.5
1,459,109	-				+0.2
1,459,124	-				+2.3
1,459,206	+				-1.2
1,459,206	+				+0.3
1,459,207	-				-0.1
1,459,207	-				-0.5
1,459,207	-				+1.5
1,459,207	-				-1.1
1,459,207	-				+0.2
1,459,207	-				-1.5
1,459,221	+				-0.6
1,459,226	+				-0.7
1,459,227	-				+0.9
1,459,227	-				+0.9
1,459,227	-				+0.3
1,459,227	-				-1.7
1,459,227	-				-0.5
1,459,227	-				-0.6
1,459,321	+				-0.2
1,459,321	+				+1.1
1,459,321	+				-0.8
1,459,321	+				-0.5
1,459,321	+				+0.3
1,459,321	+				-0.7
1,459,322	-				-0.9
1,459,363	+		DZA65_RS07045	0.10	-1.4
1,459,363	+		DZA65_RS07045	0.10	-0.7
1,459,363	+		DZA65_RS07045	0.10	-0.4
1,459,364	-		DZA65_RS07045	0.10	+0.5
1,459,364	-		DZA65_RS07045	0.10	-0.5
1,459,405	+		DZA65_RS07045	0.20	-0.1
1,459,405	+		DZA65_RS07045	0.20	+0.7
1,459,405	+		DZA65_RS07045	0.20	-1.3
1,459,405	+		DZA65_RS07045	0.20	+1.2
1,459,405	+		DZA65_RS07045	0.20	-0.8
1,459,405	+		DZA65_RS07045	0.20	+0.8
1,459,405	+		DZA65_RS07045	0.20	+1.2
1,459,405	+		DZA65_RS07045	0.20	+0.2
1,459,406	-		DZA65_RS07045	0.20	-0.1
1,459,406	-		DZA65_RS07045	0.20	-1.3
1,459,406	-		DZA65_RS07045	0.20	-0.5
1,459,406	-		DZA65_RS07045	0.20	+0.3
1,459,406	-		DZA65_RS07045	0.20	-0.8
1,459,406	-		DZA65_RS07045	0.20	+0.3
1,459,411	+		DZA65_RS07045	0.21	-0.9
1,459,411	+		DZA65_RS07045	0.21	-0.5
1,459,411	+		DZA65_RS07045	0.21	-1.7
1,459,411	+		DZA65_RS07045	0.21	+0.4
1,459,411	+		DZA65_RS07045	0.21	-0.3
1,459,411	+		DZA65_RS07045	0.21	-1.7
1,459,411	+		DZA65_RS07045	0.21	-1.8
1,459,411	+		DZA65_RS07045	0.21	+1.5
1,459,411	+		DZA65_RS07045	0.21	-2.8
1,459,411	+		DZA65_RS07045	0.21	-0.5
1,459,411	+		DZA65_RS07045	0.21	-0.5
1,459,411	+		DZA65_RS07045	0.21	-0.6
1,459,411	+		DZA65_RS07045	0.21	-0.8
1,459,411	+		DZA65_RS07045	0.21	-0.4
1,459,412	-		DZA65_RS07045	0.21	-1.1
1,459,412	-		DZA65_RS07045	0.21	-1.5
1,459,412	-				-0.1
1,459,412	-		DZA65_RS07045	0.21	-0.5
1,459,412	-		DZA65_RS07045	0.21	-2.1
1,459,412	-		DZA65_RS07045	0.21	-1.5
1,459,412	-		DZA65_RS07045	0.21	+0.6
1,459,412	-		DZA65_RS07045	0.21	-1.6
1,459,412	-		DZA65_RS07045	0.21	-0.1
1,459,412	-		DZA65_RS07045	0.21	-1.1
1,459,540	+		DZA65_RS07045	0.51	-0.2
1,459,540	+		DZA65_RS07045	0.51	+0.9
1,459,540	+		DZA65_RS07045	0.51	-1.5
1,459,541	-		DZA65_RS07045	0.52	-0.1
1,459,541	-		DZA65_RS07045	0.52	-1.0
1,459,554	+		DZA65_RS07045	0.55	+0.8
1,459,555	-		DZA65_RS07045	0.55	+0.1
1,459,555	-		DZA65_RS07045	0.55	-1.7
1,459,555	-		DZA65_RS07045	0.55	-0.3
1,459,555	-		DZA65_RS07045	0.55	-0.9
1,459,656	+		DZA65_RS07045	0.78	-1.3
1,459,656	+		DZA65_RS07045	0.78	+1.2
1,459,656	+		DZA65_RS07045	0.78	-1.2
1,459,656	+		DZA65_RS07045	0.78	-2.8
1,459,657	-		DZA65_RS07045	0.79	+0.2
1,459,739	+				-1.5
1,459,739	+				+2.1
1,459,739	+				-1.1
1,459,740	-				-0.3
1,459,740	-				+2.1
1,459,740	-				+0.2
1,459,754	-				+0.7
1,459,774	+				+0.5
1,459,775	-				-0.1
1,459,775	-				-0.6
1,459,775	-				+0.1
1,459,775	-				-1.7
1,459,792	+				+1.3
1,459,793	-				+0.1
1,459,793	-				-0.7
1,459,793	-				-0.8
1,459,799	+				+0.8
1,459,799	+				-0.9
1,459,799	+				-0.1
1,459,799	+				+0.7
1,459,799	+				-0.5
1,459,868	-				-0.5
1,459,868	-				-0.7
1,459,911	+				-1.2
1,459,982	+				-0.6
1,459,984	+				+0.2
1,459,984	+				-1.5
1,459,985	-				+0.2
1,459,985	-				-1.2
1,460,042	-				-1.0