Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS06810

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,412,781	+		DZA65_RS06800	0.67	-0.9
1,412,781	+		DZA65_RS06800	0.67	-0.8
1,412,781	+		DZA65_RS06800	0.67	-0.8
1,412,782	-		DZA65_RS06800	0.67	-0.3
1,412,794	-		DZA65_RS06800	0.69	-0.3
1,412,815	-		DZA65_RS06800	0.72	+0.2
1,412,815	-		DZA65_RS06800	0.72	-1.5
1,412,877	+		DZA65_RS06800	0.80	+0.2
1,412,877	+		DZA65_RS06800	0.80	+2.3
1,412,878	-		DZA65_RS06800	0.80	-0.9
1,412,911	+		DZA65_RS06800	0.85	-0.3
1,412,912	-		DZA65_RS06800	0.85	+0.2
1,413,000	+				+0.5
1,413,000	+				+0.9
1,413,000	+				+1.5
1,413,000	+				-1.1
1,413,000	+				-1.5
1,413,000	+				-1.1
1,413,001	-				-1.5
1,413,001	-				+0.5
1,413,001	-				-1.3
1,413,001	-				-0.5
1,413,001	-				+0.1
1,413,001	-				-1.0
1,413,001	-				-0.1
1,413,001	-				+0.5
1,413,001	-				-1.4
1,413,001	-				-1.5
1,413,007	-				+0.9
1,413,023	-				-0.6
1,413,112	+				-0.6
1,413,112	+				-1.1
1,413,112	+				+0.8
1,413,112	+				-0.6
1,413,113	-				-0.6
1,413,113	-				-1.5
1,413,231	+		DZA65_RS06805	0.21	+0.8
1,413,469	+		DZA65_RS06805	0.57	-1.2
1,413,470	-		DZA65_RS06805	0.57	+0.2
1,413,470	-		DZA65_RS06805	0.57	+0.9
1,413,470	-		DZA65_RS06805	0.57	-0.7
1,413,470	-		DZA65_RS06805	0.57	+0.1
1,413,478	+		DZA65_RS06805	0.58	+0.5
1,413,478	+		DZA65_RS06805	0.58	+0.8
1,413,478	+		DZA65_RS06805	0.58	-0.9
1,413,479	-		DZA65_RS06805	0.58	-0.6
1,413,479	-		DZA65_RS06805	0.58	-0.3
1,413,693	+				-1.9
1,413,693	+				-0.6
1,413,693	+				-0.7
1,413,694	-				+0.1
1,413,694	-				+0.9
1,413,694	-				-2.3
1,413,694	-				-1.1
1,413,694	-				-1.6
1,413,694	-				+1.1
1,413,746	+				+0.4
1,413,746	+				+1.5
1,413,746	+				-1.1
1,413,746	+				-0.3
1,413,746	+				+1.3
1,413,747	-				-0.5
1,413,747	-				-0.8
1,413,747	-				-1.6
1,413,747	-				+0.4
1,413,747	-				+0.7
1,413,747	-				-0.3
1,413,747	-				-0.3
1,413,995	+		DZA65_RS06810	0.27	-1.5
1,413,995	+		DZA65_RS06810	0.27	+0.5
1,413,995	+		DZA65_RS06810	0.27	+0.3
1,413,996	-		DZA65_RS06810	0.27	+0.9
1,414,080	+		DZA65_RS06810	0.36	-0.3
1,414,191	-		DZA65_RS06810	0.48	-1.5
1,414,191	-		DZA65_RS06810	0.48	-1.4
1,414,191	-		DZA65_RS06810	0.48	-0.1
1,414,191	-		DZA65_RS06810	0.48	-0.1
1,414,191	-		DZA65_RS06810	0.48	+0.9
1,414,290	+		DZA65_RS06810	0.58	+0.9
1,414,291	-		DZA65_RS06810	0.58	-1.3
1,414,545	+		DZA65_RS06810	0.86	-1.2
1,414,545	+		DZA65_RS06810	0.86	-0.6
1,414,545	+		DZA65_RS06810	0.86	+0.3
1,414,545	+		DZA65_RS06810	0.86	-1.1
1,414,545	+		DZA65_RS06810	0.86	-1.2
1,414,545	+		DZA65_RS06810	0.86	-0.3
1,414,546	-		DZA65_RS06810	0.86	-1.5
1,414,561	+		DZA65_RS06810	0.88	-0.5
1,414,561	+		DZA65_RS06810	0.88	+1.5
1,414,561	+		DZA65_RS06810	0.88	-1.9
1,414,562	-		DZA65_RS06810	0.88	-0.6
1,414,562	-		DZA65_RS06810	0.88	-2.6
1,414,562	-		DZA65_RS06810	0.88	+0.4
1,414,586	+				-1.8
1,414,587	-				-1.6
1,414,638	+				-0.6
1,414,639	-				-0.8
1,414,670	+				+0.3
1,414,670	+				-0.1
1,414,671	-				-0.6
1,414,671	-				-0.2
1,414,671	-				-0.8
1,414,671	-				+0.3
1,414,671	-				-0.8
1,414,724	+				-0.9
1,414,724	+				-2.2
1,414,725	-				+0.5
1,414,725	-				-1.3
1,414,725	-				-0.5
1,414,725	-				-0.1
1,414,725	-				-0.9
1,414,900	+		DZA65_RS06815	0.32	-0.5
1,414,900	+		DZA65_RS06815	0.32	-0.5
1,414,901	-		DZA65_RS06815	0.32	+0.2
1,414,974	+		DZA65_RS06815	0.42	-0.8
1,414,975	-				-0.5
1,414,993	+		DZA65_RS06815	0.44	+1.5
1,414,993	+		DZA65_RS06815	0.44	-2.4
1,414,993	+		DZA65_RS06815	0.44	-0.5
1,414,993	+		DZA65_RS06815	0.44	-1.3
1,414,993	+		DZA65_RS06815	0.44	+0.8
1,414,993	+		DZA65_RS06815	0.44	-0.1
1,414,993	+		DZA65_RS06815	0.44	-1.2
1,414,994	-		DZA65_RS06815	0.44	-0.3
1,414,994	-		DZA65_RS06815	0.44	+0.9
1,414,994	-		DZA65_RS06815	0.44	+0.2
1,415,154	+		DZA65_RS06815	0.66	-0.1
1,415,154	+		DZA65_RS06815	0.66	+0.5
1,415,154	+		DZA65_RS06815	0.66	+0.7
1,415,154	+		DZA65_RS06815	0.66	+0.3
1,415,154	+		DZA65_RS06815	0.66	+0.0
1,415,155	-		DZA65_RS06815	0.66	+0.4
1,415,155	-		DZA65_RS06815	0.66	-0.9
1,415,155	-		DZA65_RS06815	0.66	-1.9
1,415,155	-		DZA65_RS06815	0.66	-0.8
1,415,155	-		DZA65_RS06815	0.66	+0.4
1,415,158	+		DZA65_RS06815	0.67	+0.1
1,415,158	+		DZA65_RS06815	0.67	+1.5
1,415,159	-		DZA65_RS06815	0.67	-1.2
1,415,384	+				-1.1
1,415,384	+				-0.8
1,415,384	+				-0.5
1,415,385	-				-2.1
1,415,495	+				+1.1
1,415,495	+				+0.0
1,415,495	+				+1.2
1,415,496	-				+0.7
1,415,496	-				-1.3
1,415,522	+				-0.9
1,415,522	+				-0.1
1,415,522	+				-1.0
1,415,523	-				+1.5
1,415,523	-				+1.9
1,415,523	-				-0.4
1,415,523	-				+0.4
1,415,523	-				-0.4
1,415,536	-				-2.3
1,415,536	-				-1.1
1,415,551	-				+0.5
1,415,557	+				+0.5
1,415,558	-				+0.1
1,415,558	-				-0.8
1,415,564	+				-0.6