Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS06765

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,403,627	+		DZA65_RS06760	0.69	-0.8
1,403,627	+		DZA65_RS06760	0.69	-0.8
1,403,677	-		DZA65_RS06760	0.70	+1.2
1,403,891	+		DZA65_RS06760	0.78	-1.6
1,403,892	-		DZA65_RS06760	0.78	-1.0
1,403,892	-		DZA65_RS06760	0.78	-0.6
1,403,892	-		DZA65_RS06760	0.78	-1.3
1,404,225	-				-0.6
1,404,365	+				-0.1
1,404,365	+				-1.8
1,404,521	+				+1.0
1,404,521	+				-0.1
1,404,524	+				-2.6
1,404,524	+				-0.1
1,404,524	+				-0.3
1,404,524	+				+0.7
1,404,524	+				+1.1
1,404,524	+				+0.5
1,404,524	+				-0.5
1,404,524	+				-0.2
1,404,524	+				+0.2
1,404,524	+				-1.8
1,404,524	+				-0.8
1,404,525	-				+0.5
1,404,525	-				-1.1
1,404,525	-				-0.6
1,404,525	-				+0.7
1,404,525	-				-1.3
1,404,525	-				-1.5
1,404,525	-				+0.0
1,404,525	-				-0.3
1,404,525	-				+1.7
1,404,525	-				+0.9
1,404,569	+				+0.3
1,404,569	+				-1.1
1,404,569	+				-0.1
1,404,569	+				-0.5
1,404,570	-				-1.9
1,404,573	+				-0.8
1,404,573	+				+0.1
1,404,573	+				-0.6
1,404,573	+				+1.7
1,404,574	-				+0.2
1,404,574	-				-0.1
1,404,579	+				-0.5
1,404,605	+		DZA65_RS06765	0.12	-0.1
1,404,625	+		DZA65_RS06765	0.15	-1.5
1,404,625	+		DZA65_RS06765	0.15	-0.8
1,404,625	+		DZA65_RS06765	0.15	-0.6
1,404,625	+		DZA65_RS06765	0.15	-1.1
1,404,625	+		DZA65_RS06765	0.15	-2.2
1,404,625	+		DZA65_RS06765	0.15	-0.8
1,404,625	+		DZA65_RS06765	0.15	-0.1
1,404,625	+		DZA65_RS06765	0.15	-0.1
1,404,625	+		DZA65_RS06765	0.15	-0.3
1,404,626	-		DZA65_RS06765	0.15	+0.1
1,404,626	-				+0.2
1,404,626	-		DZA65_RS06765	0.15	-0.7
1,404,626	-		DZA65_RS06765	0.15	+0.5
1,404,626	-		DZA65_RS06765	0.15	+0.3
1,404,626	-		DZA65_RS06765	0.15	-1.6
1,404,626	-		DZA65_RS06765	0.15	-1.7
1,404,626	-		DZA65_RS06765	0.15	+0.9
1,404,626	-		DZA65_RS06765	0.15	-0.8
1,404,626	-		DZA65_RS06765	0.15	+0.9
1,404,629	+		DZA65_RS06765	0.16	+0.5
1,404,629	+		DZA65_RS06765	0.16	-1.1
1,404,629	+		DZA65_RS06765	0.16	+0.7
1,404,629	+		DZA65_RS06765	0.16	-2.4
1,404,629	+		DZA65_RS06765	0.16	-1.3
1,404,629	+		DZA65_RS06765	0.16	-0.2
1,404,629	+		DZA65_RS06765	0.16	-0.7
1,404,629	+		DZA65_RS06765	0.16	-0.1
1,404,629	+		DZA65_RS06765	0.16	+0.8
1,404,629	+		DZA65_RS06765	0.16	+0.5
1,404,629	+		DZA65_RS06765	0.16	+0.5
1,404,629	+		DZA65_RS06765	0.16	-1.1
1,404,629	+		DZA65_RS06765	0.16	-0.3
1,404,630	-		DZA65_RS06765	0.16	-0.5
1,404,630	-		DZA65_RS06765	0.16	-0.1
1,404,630	-		DZA65_RS06765	0.16	-1.7
1,404,630	-		DZA65_RS06765	0.16	-1.2
1,404,630	-		DZA65_RS06765	0.16	-0.3
1,404,630	-		DZA65_RS06765	0.16	+0.9
1,404,630	-		DZA65_RS06765	0.16	-0.5
1,404,630	-		DZA65_RS06765	0.16	+0.1
1,404,630	-		DZA65_RS06765	0.16	+0.5
1,404,630	-		DZA65_RS06765	0.16	-0.2
1,404,630	-		DZA65_RS06765	0.16	-1.8
1,404,630	-		DZA65_RS06765	0.16	-1.6
1,404,630	-		DZA65_RS06765	0.16	+0.1
1,404,630	-		DZA65_RS06765	0.16	+0.5
1,404,630	-		DZA65_RS06765	0.16	-0.3
1,404,630	-		DZA65_RS06765	0.16	+1.1
1,404,631	+		DZA65_RS06765	0.16	-1.3
1,404,631	+		DZA65_RS06765	0.16	+0.5
1,404,632	-		DZA65_RS06765	0.16	-0.1
1,404,651	+		DZA65_RS06765	0.20	-0.1
1,404,652	-		DZA65_RS06765	0.20	-0.1
1,404,652	-		DZA65_RS06765	0.20	-0.5
1,404,652	-		DZA65_RS06765	0.20	-0.4
1,404,652	-		DZA65_RS06765	0.20	-0.1
1,404,762	+		DZA65_RS06765	0.39	+0.8
1,404,883	+		DZA65_RS06765	0.60	-1.5
1,404,883	+		DZA65_RS06765	0.60	+0.2
1,404,884	-		DZA65_RS06765	0.60	-0.1
1,405,080	+				-1.1
1,405,083	+				+1.1
1,405,083	+				-0.1
1,405,083	+				-0.9
1,405,083	+				-0.1
1,405,084	-				-2.1
1,405,084	-				-0.1
1,405,084	-				+3.1
1,405,105	+				-0.8
1,405,105	+				-1.9
1,405,105	+				-1.1
1,405,105	+				+0.2
1,405,105	+				-0.5
1,405,105	+				+0.3
1,405,106	-				-0.8
1,405,106	-				+0.5
1,405,106	-				-0.5
1,405,106	-				-0.8
1,405,106	-				+0.1
1,405,106	-				+0.2
1,405,106	-				-1.3
1,405,115	+				+0.4
1,405,115	+				+0.2
1,405,115	+				-0.8
1,405,115	+				+0.3
1,405,115	+				-1.5
1,405,115	+				-0.8
1,405,116	-				+0.2
1,405,116	-				-0.4
1,405,116	-				+0.3
1,405,119	+				+0.9
1,405,119	+				-0.8
1,405,119	+				-1.6
1,405,120	-				+0.8
1,405,120	-				+0.3
1,405,120	-				-1.1
1,405,253	+				+0.1
1,405,253	+				+0.9
1,405,253	+				-0.2
1,405,254	-				+1.5
1,405,254	-				-0.3
1,405,254	-				+0.3
1,405,255	+				-0.3
1,405,255	+				-0.4
1,405,256	-				-0.1
1,405,256	-				-0.3
1,405,295	+				-1.1
1,405,296	-				-0.3
1,405,381	+		DZA65_RS06770	0.12	-1.9
1,405,418	-		DZA65_RS06770	0.14	-1.6
1,405,418	-		DZA65_RS06770	0.14	-0.4
1,405,418	-		DZA65_RS06770	0.14	+0.7
1,405,418	-		DZA65_RS06770	0.14	+0.1
1,405,660	+		DZA65_RS06770	0.26	-0.3
1,405,660	+		DZA65_RS06770	0.26	+0.2
1,405,661	-		DZA65_RS06770	0.26	-0.2
1,406,015	+		DZA65_RS06770	0.43	-1.4
1,406,015	+		DZA65_RS06770	0.43	-0.1
1,406,015	+		DZA65_RS06770	0.43	+0.9
1,406,016	-		DZA65_RS06770	0.43	+0.3
1,406,016	-		DZA65_RS06770	0.43	-0.3