Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS06690

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,385,240	-		DZA65_RS06685	0.59	-1.6
1,385,321	+		DZA65_RS06685	0.64	-0.7
1,385,332	+		DZA65_RS06685	0.64	-1.0
1,385,333	-		DZA65_RS06685	0.64	-0.0
1,385,354	-		DZA65_RS06685	0.66	+0.3
1,385,354	-		DZA65_RS06685	0.66	-1.7
1,385,356	+		DZA65_RS06685	0.66	-0.5
1,385,356	+		DZA65_RS06685	0.66	-0.6
1,385,389	+		DZA65_RS06685	0.68	+1.1
1,385,389	+		DZA65_RS06685	0.68	-1.0
1,385,389	+		DZA65_RS06685	0.68	-1.5
1,385,390	-		DZA65_RS06685	0.68	-0.5
1,385,390	-		DZA65_RS06685	0.68	-1.0
1,385,390	-		DZA65_RS06685	0.68	-1.0
1,385,418	-		DZA65_RS06685	0.69	+0.1
1,385,458	+		DZA65_RS06685	0.72	+1.0
1,385,458	+				+3.1
1,385,459	-		DZA65_RS06685	0.72	-0.9
1,385,459	-		DZA65_RS06685	0.72	-0.8
1,385,459	-		DZA65_RS06685	0.72	-0.0
1,385,459	-		DZA65_RS06685	0.72	-1.0
1,385,459	-		DZA65_RS06685	0.72	+0.5
1,385,486	+		DZA65_RS06685	0.73	-1.1
1,385,487	-		DZA65_RS06685	0.74	-0.8
1,385,487	-		DZA65_RS06685	0.74	+0.5
1,385,487	-		DZA65_RS06685	0.74	-0.7
1,385,487	-		DZA65_RS06685	0.74	-1.2
1,385,488	+		DZA65_RS06685	0.74	-0.8
1,385,488	+		DZA65_RS06685	0.74	-0.5
1,385,488	+		DZA65_RS06685	0.74	-1.5
1,385,488	+		DZA65_RS06685	0.74	+0.1
1,385,488	+				-0.5
1,385,488	+		DZA65_RS06685	0.74	-0.3
1,385,488	+		DZA65_RS06685	0.74	+0.1
1,385,488	+		DZA65_RS06685	0.74	-1.3
1,385,488	+		DZA65_RS06685	0.74	-0.5
1,385,488	+		DZA65_RS06685	0.74	-0.9
1,385,488	+		DZA65_RS06685	0.74	-1.2
1,385,489	-		DZA65_RS06685	0.74	-0.5
1,385,489	-		DZA65_RS06685	0.74	-0.5
1,385,489	-		DZA65_RS06685	0.74	+0.2
1,385,489	-		DZA65_RS06685	0.74	-0.8
1,385,489	-		DZA65_RS06685	0.74	-0.9
1,385,489	-		DZA65_RS06685	0.74	+0.3
1,385,489	-		DZA65_RS06685	0.74	-1.3
1,385,489	-		DZA65_RS06685	0.74	-0.0
1,385,489	-		DZA65_RS06685	0.74	-1.5
1,385,489	-		DZA65_RS06685	0.74	-1.5
1,385,489	-		DZA65_RS06685	0.74	-1.3
1,385,489	-		DZA65_RS06685	0.74	-0.0
1,385,489	-		DZA65_RS06685	0.74	+0.3
1,385,548	+		DZA65_RS06685	0.77	-0.3
1,385,548	+		DZA65_RS06685	0.77	-1.0
1,385,549	-		DZA65_RS06685	0.77	+0.5
1,385,549	-		DZA65_RS06685	0.77	+0.5
1,385,549	-		DZA65_RS06685	0.77	-0.8
1,385,549	-		DZA65_RS06685	0.77	+0.1
1,385,549	-		DZA65_RS06685	0.77	-0.0
1,385,549	-		DZA65_RS06685	0.77	-0.6
1,385,549	-		DZA65_RS06685	0.77	-1.6
1,385,608	+		DZA65_RS06685	0.81	-0.2
1,385,609	-		DZA65_RS06685	0.81	-0.5
1,385,665	+		DZA65_RS06685	0.84	+0.5
1,385,692	+		DZA65_RS06685	0.86	-3.4
1,385,692	+		DZA65_RS06685	0.86	-0.4
1,385,693	-		DZA65_RS06685	0.86	+0.6
1,385,737	+		DZA65_RS06685	0.89	-0.0
1,385,738	-		DZA65_RS06685	0.89	-1.6
1,385,738	-		DZA65_RS06685	0.89	-1.3
1,385,738	-		DZA65_RS06685	0.89	-1.6
1,385,738	-		DZA65_RS06685	0.89	+0.3
1,385,795	+				+0.5
1,385,795	+				-0.6
1,385,795	+				-0.7
1,385,795	+				+0.4
1,385,795	+				-0.6
1,385,796	-				-1.3
1,385,796	-				-2.3
1,385,796	-				+0.5
1,385,918	+				+1.5
1,385,919	-				-1.6
1,385,919	-				-1.6
1,385,927	+				-0.6
1,385,927	+				-0.9
1,385,927	+				-1.5
1,385,927	+				-0.0
1,385,927	+				-1.3
1,385,927	+				+1.0
1,385,927	+				-0.7
1,385,927	+				-0.9
1,385,927	+				-0.2
1,385,928	-				-0.3
1,385,928	-				-0.8
1,385,928	-				-1.9
1,385,928	-				-0.6
1,385,928	-				-0.5
1,385,928	-				-0.3
1,385,928	-				+0.0
1,385,928	-				-0.5
1,385,928	-				-1.9
1,385,943	+				+0.1
1,385,977	+				-0.9
1,385,977	+				-1.3
1,385,977	+				-0.3
1,385,985	+				-0.8
1,386,007	+				-0.5
1,386,007	+				-1.6
1,386,007	+				-0.8
1,386,007	+				-1.6
1,386,007	+				-0.6
1,386,007	+				-1.3
1,386,007	+				+0.8
1,386,007	+				-1.0
1,386,007	+				+0.2
1,386,008	-				-0.8
1,386,008	-				+0.1
1,386,073	+				-0.3
1,386,073	+				-0.8
1,386,181	+				+0.2
1,386,193	-				-2.0
1,386,203	+				-1.6
1,386,204	-				+1.3
1,386,217	-				-0.8
1,386,248	+				-0.0
1,386,248	+				-0.0
1,386,248	+				-0.1
1,386,249	-				-0.5
1,386,249	-				-1.3
1,386,251	+				-1.5
1,386,251	+				-0.0
1,386,252	-				-2.6
1,386,252	-				+0.3
1,386,252	-				-0.5
1,386,252	-				-1.2
1,386,370	+		DZA65_RS06690	0.13	+0.5
1,386,370	+		DZA65_RS06690	0.13	-0.5
1,386,370	+		DZA65_RS06690	0.13	-0.7
1,386,370	+		DZA65_RS06690	0.13	-1.2
1,386,370	+		DZA65_RS06690	0.13	+0.1
1,386,371	-		DZA65_RS06690	0.13	+0.8
1,386,371	-		DZA65_RS06690	0.13	+1.2
1,386,412	+		DZA65_RS06690	0.16	-0.0
1,386,412	+		DZA65_RS06690	0.16	+0.3
1,386,413	-		DZA65_RS06690	0.16	-0.9
1,386,547	+		DZA65_RS06690	0.27	-0.1
1,386,548	-		DZA65_RS06690	0.27	+1.1
1,386,555	-		DZA65_RS06690	0.28	-1.3
1,386,602	+		DZA65_RS06690	0.31	-0.9
1,386,602	+		DZA65_RS06690	0.31	-0.7
1,386,602	+		DZA65_RS06690	0.31	-0.6
1,386,602	+		DZA65_RS06690	0.31	+0.1
1,386,603	-		DZA65_RS06690	0.32	-1.2
1,386,603	-		DZA65_RS06690	0.32	-0.5
1,386,603	-		DZA65_RS06690	0.32	+0.2
1,386,603	-		DZA65_RS06690	0.32	+0.9
1,386,704	-		DZA65_RS06690	0.40	-0.8
1,386,724	+		DZA65_RS06690	0.41	-2.6
1,386,725	-		DZA65_RS06690	0.41	-2.0
1,386,725	-		DZA65_RS06690	0.41	-1.3
1,386,831	+		DZA65_RS06690	0.50	+0.4
1,386,832	-		DZA65_RS06690	0.50	+1.0
1,386,832	-		DZA65_RS06690	0.50	-1.7
1,386,832	-		DZA65_RS06690	0.50	+0.1
1,386,877	+		DZA65_RS06690	0.54	-0.6
1,386,877	+		DZA65_RS06690	0.54	+0.1
1,386,877	+		DZA65_RS06690	0.54	-0.1
1,386,877	+		DZA65_RS06690	0.54	-1.4
1,386,877	+		DZA65_RS06690	0.54	-1.9
1,386,877	+		DZA65_RS06690	0.54	+0.3
1,386,877	+		DZA65_RS06690	0.54	-0.1
1,386,877	+		DZA65_RS06690	0.54	+0.5
1,386,877	+		DZA65_RS06690	0.54	-0.3
1,386,877	+		DZA65_RS06690	0.54	-1.2
1,386,877	+		DZA65_RS06690	0.54	+0.2
1,386,877	+		DZA65_RS06690	0.54	-0.5
1,386,877	+		DZA65_RS06690	0.54	-1.2
1,386,877	+		DZA65_RS06690	0.54	-1.3
1,386,877	+		DZA65_RS06690	0.54	-0.4
1,386,878	-		DZA65_RS06690	0.54	-0.8
1,386,878	-		DZA65_RS06690	0.54	+2.1
1,386,878	-		DZA65_RS06690	0.54	-0.2
1,386,878	-		DZA65_RS06690	0.54	-0.4
1,386,878	-		DZA65_RS06690	0.54	-0.0
1,386,878	-		DZA65_RS06690	0.54	-0.5
1,386,878	-		DZA65_RS06690	0.54	-0.5
1,386,878	-		DZA65_RS06690	0.54	-2.5
1,386,878	-		DZA65_RS06690	0.54	+0.8
1,386,878	-		DZA65_RS06690	0.54	+0.1
1,386,878	-		DZA65_RS06690	0.54	-0.9
1,386,879	+		DZA65_RS06690	0.54	+0.7
1,386,879	+		DZA65_RS06690	0.54	+1.0
1,386,879	+		DZA65_RS06690	0.54	-1.3
1,386,879	+		DZA65_RS06690	0.54	-0.1
1,386,879	+		DZA65_RS06690	0.54	+0.1
1,386,879	+		DZA65_RS06690	0.54	+0.5
1,386,879	+		DZA65_RS06690	0.54	+1.0
1,386,879	+		DZA65_RS06690	0.54	+0.4
1,386,879	+		DZA65_RS06690	0.54	+0.0
1,386,879	+		DZA65_RS06690	0.54	-1.8
1,386,879	+		DZA65_RS06690	0.54	-0.7
1,386,880	-		DZA65_RS06690	0.54	-1.9
1,386,880	-		DZA65_RS06690	0.54	-0.7
1,386,880	-				-0.0
1,386,880	-		DZA65_RS06690	0.54	-0.3
1,386,880	-		DZA65_RS06690	0.54	-1.2
1,386,880	-		DZA65_RS06690	0.54	+0.1
1,386,881	+		DZA65_RS06690	0.54	-0.8
1,386,881	+		DZA65_RS06690	0.54	-0.5
1,386,881	+		DZA65_RS06690	0.54	-0.1
1,386,881	+		DZA65_RS06690	0.54	-1.5
1,386,881	+		DZA65_RS06690	0.54	-0.7
1,386,881	+		DZA65_RS06690	0.54	-2.7
1,386,881	+		DZA65_RS06690	0.54	-0.1
1,386,881	+		DZA65_RS06690	0.54	+0.2
1,386,881	+		DZA65_RS06690	0.54	+0.5
1,386,881	+		DZA65_RS06690	0.54	+0.4
1,386,881	+		DZA65_RS06690	0.54	-0.6
1,386,881	+		DZA65_RS06690	0.54	+0.7
1,386,881	+		DZA65_RS06690	0.54	-0.3
1,386,882	-		DZA65_RS06690	0.54	+0.2
1,386,882	-		DZA65_RS06690	0.54	-1.3
1,386,882	-		DZA65_RS06690	0.54	+1.2
1,386,882	-		DZA65_RS06690	0.54	-1.0
1,386,882	-		DZA65_RS06690	0.54	+0.5
1,386,882	-		DZA65_RS06690	0.54	+0.8
1,386,882	-		DZA65_RS06690	0.54	+1.0
1,386,882	-		DZA65_RS06690	0.54	+1.1
1,386,882	-		DZA65_RS06690	0.54	-1.5
1,386,882	-		DZA65_RS06690	0.54	-1.5
1,386,882	-		DZA65_RS06690	0.54	-0.4
1,386,882	-		DZA65_RS06690	0.54	-1.8
1,386,882	-		DZA65_RS06690	0.54	-1.4
1,386,943	+		DZA65_RS06690	0.59	-1.0
1,386,943	+		DZA65_RS06690	0.59	+0.5
1,386,943	+		DZA65_RS06690	0.59	+1.2
1,386,943	+		DZA65_RS06690	0.59	+0.5
1,386,943	+		DZA65_RS06690	0.59	-1.4
1,386,943	+		DZA65_RS06690	0.59	-0.6
1,386,943	+		DZA65_RS06690	0.59	-0.1
1,386,943	+		DZA65_RS06690	0.59	-0.3
1,386,943	+		DZA65_RS06690	0.59	+0.0
1,386,944	-		DZA65_RS06690	0.59	-0.0
1,386,944	-		DZA65_RS06690	0.59	-1.0
1,386,944	-		DZA65_RS06690	0.59	-0.0
1,386,944	-		DZA65_RS06690	0.59	+0.5
1,386,944	-		DZA65_RS06690	0.59	-1.1
1,386,944	-		DZA65_RS06690	0.59	+0.2
1,386,944	-		DZA65_RS06690	0.59	-1.5
1,386,944	-		DZA65_RS06690	0.59	-0.5
1,386,944	-		DZA65_RS06690	0.59	+0.8
1,386,944	-		DZA65_RS06690	0.59	-0.5
1,386,944	-		DZA65_RS06690	0.59	-1.3
1,386,945	+		DZA65_RS06690	0.59	+1.0
1,386,945	+		DZA65_RS06690	0.59	-2.4
1,386,945	+		DZA65_RS06690	0.59	-1.2
1,386,945	+		DZA65_RS06690	0.59	-2.8
1,386,945	+		DZA65_RS06690	0.59	+0.3
1,386,945	+		DZA65_RS06690	0.59	+0.6
1,386,945	+		DZA65_RS06690	0.59	-0.7
1,386,945	+		DZA65_RS06690	0.59	-0.2
1,386,946	-		DZA65_RS06690	0.59	-0.0
1,386,946	-		DZA65_RS06690	0.59	+0.4
1,386,946	-		DZA65_RS06690	0.59	-0.6
1,386,946	-		DZA65_RS06690	0.59	-1.0
1,386,946	-		DZA65_RS06690	0.59	-0.2
1,386,946	-		DZA65_RS06690	0.59	-0.6
1,386,946	-		DZA65_RS06690	0.59	-0.9
1,386,946	-		DZA65_RS06690	0.59	-0.1
1,386,946	-		DZA65_RS06690	0.59	-1.3
1,387,049	-		DZA65_RS06690	0.68	-1.6
1,387,049	-		DZA65_RS06690	0.68	+0.5
1,387,130	+		DZA65_RS06690	0.74	+0.3
1,387,130	+		DZA65_RS06690	0.74	-0.5
1,387,130	+		DZA65_RS06690	0.74	-0.0
1,387,131	-		DZA65_RS06690	0.74	-0.8
1,387,131	-		DZA65_RS06690	0.74	-0.4
1,387,137	+		DZA65_RS06690	0.75	-0.0
1,387,137	+		DZA65_RS06690	0.75	-0.0
1,387,137	+		DZA65_RS06690	0.75	-0.8
1,387,137	+		DZA65_RS06690	0.75	-0.7
1,387,137	+		DZA65_RS06690	0.75	-1.5
1,387,137	+		DZA65_RS06690	0.75	-0.5
1,387,137	+		DZA65_RS06690	0.75	-0.1
1,387,137	+		DZA65_RS06690	0.75	-0.5
1,387,137	+		DZA65_RS06690	0.75	+0.8
1,387,137	+		DZA65_RS06690	0.75	+0.7
1,387,138	-		DZA65_RS06690	0.75	-0.9
1,387,138	-		DZA65_RS06690	0.75	+0.5
1,387,138	-		DZA65_RS06690	0.75	+1.1
1,387,138	-				+2.1
1,387,138	-		DZA65_RS06690	0.75	-0.9
1,387,138	-		DZA65_RS06690	0.75	+0.6
1,387,138	-		DZA65_RS06690	0.75	+0.3
1,387,138	-		DZA65_RS06690	0.75	-0.5
1,387,138	-		DZA65_RS06690	0.75	-1.8
1,387,138	-		DZA65_RS06690	0.75	-0.5
1,387,138	-		DZA65_RS06690	0.75	+0.2
1,387,138	-		DZA65_RS06690	0.75	-0.1
1,387,139	+		DZA65_RS06690	0.75	-0.0
1,387,139	+		DZA65_RS06690	0.75	-0.6
1,387,140	-		DZA65_RS06690	0.75	+0.8
1,387,375	-				-1.2
1,387,464	+				-1.4
1,387,464	+				-0.0
1,387,464	+				-1.6
1,387,464	+				-0.6
1,387,464	+				-0.4
1,387,465	-				+1.0
1,387,465	-				-3.0
1,387,465	-				-1.6
1,387,465	-				+0.2
1,387,465	-				-0.0
1,387,465	-				-0.7
1,387,465	-				-0.7
1,387,465	-				-0.6
1,387,465	-				+0.3
1,387,469	+				+0.9
1,387,469	+				+0.7
1,387,469	+				-2.9
1,387,469	+				-1.8
1,387,469	+				-0.4
1,387,469	+				-0.0
1,387,469	+				-0.5
1,387,470	-				-0.8
1,387,470	-				-1.2
1,387,470	-				-0.2
1,387,470	-				+0.2
1,387,476	+				-1.0
1,387,476	+				+0.2
1,387,476	+				+0.4
1,387,476	+				-0.5
1,387,477	-				+0.4
1,387,477	-				+1.0
1,387,477	-				-0.0
1,387,483	+				-1.0
1,387,484	-				-0.8
1,387,484	-				+0.3
1,387,513	+				-0.3
1,387,514	-				-0.5
1,387,514	-				-0.2
1,387,514	-				+0.7
1,387,514	-				+0.1
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1,388,132	+		DZA65_RS06695	0.57	-0.3
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1,388,133	-		DZA65_RS06695	0.57	-0.1
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1,388,133	-		DZA65_RS06695	0.57	+0.1
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1,388,133	-		DZA65_RS06695	0.57	-1.3
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1,388,154	+		DZA65_RS06695	0.59	-0.7
1,388,154	+		DZA65_RS06695	0.59	-0.9
1,388,154	+		DZA65_RS06695	0.59	-1.8
1,388,154	+				+1.5
1,388,154	+		DZA65_RS06695	0.59	-0.3
1,388,154	+		DZA65_RS06695	0.59	-1.9
1,388,154	+		DZA65_RS06695	0.59	-2.2
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1,388,155	-		DZA65_RS06695	0.59	+0.5
1,388,155	-		DZA65_RS06695	0.59	-1.0
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1,388,155	-		DZA65_RS06695	0.59	-0.6
1,388,155	-		DZA65_RS06695	0.59	+0.2
1,388,331	-		DZA65_RS06695	0.74	+1.8
1,388,331	-		DZA65_RS06695	0.74	-0.4
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1,388,350	+		DZA65_RS06695	0.76	+0.3
1,388,351	-		DZA65_RS06695	0.76	+0.5
1,388,351	-		DZA65_RS06695	0.76	-1.0
1,388,351	-		DZA65_RS06695	0.76	-0.4
1,388,351	-		DZA65_RS06695	0.76	+0.7