Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS05770

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,184,388	+		DZA65_RS05765	0.35	-0.4
1,184,388	+		DZA65_RS05765	0.35	+0.1
1,184,388	+		DZA65_RS05765	0.35	-0.5
1,184,388	+		DZA65_RS05765	0.35	+3.6
1,184,389	-		DZA65_RS05765	0.35	-0.2
1,184,389	-		DZA65_RS05765	0.35	+0.8
1,184,389	-		DZA65_RS05765	0.35	-0.8
1,184,549	+		DZA65_RS05765	0.51	-1.0
1,184,550	-		DZA65_RS05765	0.51	-0.7
1,184,550	-		DZA65_RS05765	0.51	-2.8
1,184,559	-		DZA65_RS05765	0.52	-0.0
1,184,574	+		DZA65_RS05765	0.53	-0.0
1,184,574	+		DZA65_RS05765	0.53	+0.1
1,184,574	+		DZA65_RS05765	0.53	+0.1
1,184,574	+		DZA65_RS05765	0.53	+0.2
1,184,575	-		DZA65_RS05765	0.53	-0.0
1,184,575	-		DZA65_RS05765	0.53	-0.2
1,184,575	-		DZA65_RS05765	0.53	-1.0
1,184,575	-		DZA65_RS05765	0.53	-1.2
1,184,575	-		DZA65_RS05765	0.53	-0.4
1,184,576	+		DZA65_RS05765	0.53	+0.6
1,184,577	-		DZA65_RS05765	0.53	+0.8
1,184,577	-		DZA65_RS05765	0.53	-1.4
1,184,577	-		DZA65_RS05765	0.53	-0.3
1,184,577	-		DZA65_RS05765	0.53	-2.4
1,184,577	-		DZA65_RS05765	0.53	+0.6
1,184,577	-		DZA65_RS05765	0.53	+0.6
1,184,631	+		DZA65_RS05765	0.58	-0.3
1,184,632	-		DZA65_RS05765	0.59	-0.7
1,184,661	+		DZA65_RS05765	0.61	+0.8
1,184,661	+		DZA65_RS05765	0.61	-2.2
1,184,661	+		DZA65_RS05765	0.61	-0.5
1,184,661	+		DZA65_RS05765	0.61	+0.8
1,184,661	+		DZA65_RS05765	0.61	-0.4
1,184,661	+		DZA65_RS05765	0.61	-0.2
1,184,661	+		DZA65_RS05765	0.61	+0.4
1,184,662	-		DZA65_RS05765	0.61	+0.3
1,184,662	-		DZA65_RS05765	0.61	-0.2
1,184,662	-		DZA65_RS05765	0.61	+1.6
1,184,662	-		DZA65_RS05765	0.61	-0.2
1,184,662	-		DZA65_RS05765	0.61	-1.5
1,184,664	+		DZA65_RS05765	0.62	+1.2
1,184,665	-		DZA65_RS05765	0.62	-1.9
1,184,691	-		DZA65_RS05765	0.64	-0.8
1,184,775	+		DZA65_RS05765	0.72	-0.8
1,184,775	+		DZA65_RS05765	0.72	+0.6
1,184,776	-		DZA65_RS05765	0.72	-0.6
1,184,776	-		DZA65_RS05765	0.72	-0.4
1,184,781	+		DZA65_RS05765	0.73	+0.3
1,184,782	-		DZA65_RS05765	0.73	-2.1
1,184,782	-		DZA65_RS05765	0.73	+1.0
1,184,816	+				+1.6
1,184,816	+		DZA65_RS05765	0.76	-0.6
1,184,816	+		DZA65_RS05765	0.76	-1.4
1,184,817	-		DZA65_RS05765	0.76	-1.1
1,184,817	-		DZA65_RS05765	0.76	-0.2
1,184,817	-		DZA65_RS05765	0.76	-0.0
1,184,817	-		DZA65_RS05765	0.76	-0.9
1,184,817	-		DZA65_RS05765	0.76	-0.6
1,184,817	-		DZA65_RS05765	0.76	-0.2
1,184,817	-		DZA65_RS05765	0.76	-0.4
1,184,817	-		DZA65_RS05765	0.76	-0.8
1,184,820	+		DZA65_RS05765	0.77	+0.4
1,184,820	+		DZA65_RS05765	0.77	-0.2
1,184,820	+		DZA65_RS05765	0.77	+0.2
1,184,821	-		DZA65_RS05765	0.77	+0.6
1,184,821	-		DZA65_RS05765	0.77	+1.3
1,184,859	-		DZA65_RS05765	0.80	-0.8
1,184,869	+		DZA65_RS05765	0.81	+0.2
1,184,886	-		DZA65_RS05765	0.83	-1.8
1,185,049	-				-0.7
1,185,060	+				+0.2
1,185,060	+				+1.8
1,185,060	+				-0.2
1,185,060	+				+0.6
1,185,060	+				-1.0
1,185,060	+				-1.4
1,185,060	+				-0.3
1,185,061	-				-1.6
1,185,061	-				-0.8
1,185,061	-				-0.3
1,185,061	-				-0.3
1,185,061	-				-0.9
1,185,061	-				+1.0
1,185,119	-				-0.0
1,185,134	+				+0.3
1,185,154	+				+1.9
1,185,154	+				+1.1
1,185,154	+				+0.6
1,185,155	-				+1.0
1,185,155	-				+0.7
1,185,165	-				-0.7
1,185,179	-				-0.2
1,185,179	-				-0.7
1,185,259	-				+1.3
1,185,259	-				+1.6
1,185,268	+				-0.5
1,185,268	+				-1.9
1,185,269	-				-0.1
1,185,277	+				-0.1
1,185,278	-				-0.5
1,185,278	-				-0.4
1,185,278	-				-0.7
1,185,278	-				-2.0
1,185,278	-				+0.2
1,185,278	-				-1.8
1,185,278	-				-0.4
1,185,278	-				-1.1
1,185,350	+				+1.3
1,185,385	-				-1.6
1,185,449	-		DZA65_RS05770	0.16	-1.0
1,185,474	+		DZA65_RS05770	0.20	-1.0
1,185,474	+		DZA65_RS05770	0.20	+1.4
1,185,475	-		DZA65_RS05770	0.21	-0.5
1,185,475	-		DZA65_RS05770	0.21	+0.3
1,185,475	-		DZA65_RS05770	0.21	-0.4
1,185,483	+		DZA65_RS05770	0.22	+0.2
1,185,483	+		DZA65_RS05770	0.22	-2.4
1,185,483	+		DZA65_RS05770	0.22	-0.6
1,185,484	-		DZA65_RS05770	0.22	+1.3
1,185,484	-		DZA65_RS05770	0.22	+0.6
1,185,484	-		DZA65_RS05770	0.22	+0.8
1,185,484	-		DZA65_RS05770	0.22	+0.8
1,185,637	-		DZA65_RS05770	0.52	-0.2
1,185,637	-		DZA65_RS05770	0.52	-0.0
1,185,657	+		DZA65_RS05770	0.56	-1.4
1,185,658	-		DZA65_RS05770	0.56	+0.2
1,185,658	-		DZA65_RS05770	0.56	-2.1
1,185,661	+		DZA65_RS05770	0.56	-0.4
1,185,662	-		DZA65_RS05770	0.57	-0.1
1,185,662	-		DZA65_RS05770	0.57	-1.0
1,185,793	+		DZA65_RS05770	0.82	-1.0
1,185,793	+		DZA65_RS05770	0.82	-0.5
1,185,811	+		DZA65_RS05770	0.85	-1.8
1,185,811	+		DZA65_RS05770	0.85	-0.3
1,185,811	+				+1.0
1,185,811	+		DZA65_RS05770	0.85	+0.1
1,185,811	+		DZA65_RS05770	0.85	+0.4
1,185,811	+		DZA65_RS05770	0.85	-0.2
1,185,812	-		DZA65_RS05770	0.85	-1.6
1,185,812	-		DZA65_RS05770	0.85	-0.4
1,185,812	-		DZA65_RS05770	0.85	+0.2
1,185,812	-		DZA65_RS05770	0.85	-1.2
1,185,812	-		DZA65_RS05770	0.85	-0.9
1,185,812	-		DZA65_RS05770	0.85	-1.2
1,185,812	-		DZA65_RS05770	0.85	-2.2
1,185,924	+				-1.9
1,185,925	-				-0.0
1,185,925	-				+0.8
1,185,936	-				-0.0
1,185,959	+		DZA65_RS05775	0.12	-0.8
1,185,959	+		DZA65_RS05775	0.12	+0.8
1,185,959	+		DZA65_RS05775	0.12	+1.6
1,186,027	+		DZA65_RS05775	0.36	+0.8
1,186,027	+		DZA65_RS05775	0.36	-0.7
1,186,027	+		DZA65_RS05775	0.36	-0.8
1,186,028	-		DZA65_RS05775	0.36	+0.1
1,186,029	+		DZA65_RS05775	0.36	-1.2
1,186,030	-		DZA65_RS05775	0.37	-1.1
1,186,030	-		DZA65_RS05775	0.37	+0.3
1,186,030	-		DZA65_RS05775	0.37	+0.1
1,186,030	-		DZA65_RS05775	0.37	-0.0
1,186,064	+		DZA65_RS05775	0.49	+1.2
1,186,137	+		DZA65_RS05775	0.74	-0.4
1,186,189	+				+0.6
1,186,189	+				-0.0
1,186,190	-				-0.0
1,186,190	-				-0.8
1,186,202	-				+0.3
1,186,219	+				-0.4
1,186,272	+				-2.8
1,186,272	+				-1.0
1,186,272	+				-1.2
1,186,273	-				-0.2
1,186,273	-				+1.6
1,186,275	+				+0.3
1,186,275	+				-0.0
1,186,276	-				+1.2
1,186,294	+				-0.5
1,186,295	-				-0.1
1,186,297	-				-0.1
1,186,297	-				+0.3
1,186,315	-				-1.3
1,186,316	+				-1.9
1,186,316	+				-1.2
1,186,317	-				-0.2
1,186,317	-				-1.0
1,186,334	+				-0.4
1,186,335	-				+0.2
1,186,336	+				-0.0
1,186,337	-				-0.1
1,186,337	-				+1.2
1,186,337	-				+1.6
1,186,337	-				-0.6
1,186,407	+				+1.0
1,186,407	+				-0.2
1,186,408	-				-0.8
1,186,429	+				+1.0
1,186,439	+				-0.1
1,186,493	+				-0.8
1,186,497	+				-0.4
1,186,497	+				+0.6
1,186,497	+				+0.2
1,186,498	-				+0.6
1,186,498	-				-0.3
1,186,511	+				+0.2
1,186,525	+				+0.3
1,186,525	+				-0.5
1,186,525	+				-0.1
1,186,585	-				-0.8
1,186,585	-				-0.9
1,186,585	-				+0.8
1,186,707	+				-0.2
1,186,718	+				+0.3
1,186,718	+				+0.4
1,186,719	-				-0.4
1,186,719	-				-0.0
1,186,719	-				-0.8
1,186,719	-				-0.2
1,186,733	+				-1.0
1,186,791	+				-2.6
1,186,833	+				-1.1
1,186,848	+				-1.1
1,186,848	+				+0.2
1,186,848	+				-1.9
1,186,849	-				+1.2
1,186,849	-				-0.1
1,186,849	-				-1.0
1,186,849	-				+1.7
1,186,855	+				-0.4
1,186,855	+				-1.4
1,186,855	+				-1.7
1,186,855	+				-1.2
1,186,855	+				-0.0
1,186,855	+				-1.3
1,186,856	-				-1.9
1,186,856	-				+0.4
1,186,856	-				+1.6
1,186,856	-				+2.6
1,186,856	-				-0.2
1,186,881	-				-2.8