Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS05505 and DZA65_RS05510 are separated by 148 nucleotides DZA65_RS05510 and DZA65_RS05515 are separated by 3 nucleotides DZA65_RS05515 and DZA65_RS05520 are separated by 3 nucleotides
DZA65_RS05505: DZA65_RS05505 - UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase, at 1,133,281 to 1,134,303
_RS05505
DZA65_RS05510: DZA65_RS05510 - 3-hydroxyacyl-ACP dehydratase FabZ, at 1,134,452 to 1,134,907
_RS05510
DZA65_RS05515: DZA65_RS05515 - acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase, at 1,134,911 to 1,135,699
_RS05515
DZA65_RS05520: DZA65_RS05520 - lipid-A-disaccharide synthase, at 1,135,703 to 1,136,851
_RS05520
Position (kb) 1134
1135
1136 Strain fitness (log2 ratio) -2
-1
0
1 at 1134.285 kb on + strand at 1134.336 kb on + strand at 1134.336 kb on + strand at 1134.336 kb on + strand at 1134.336 kb on + strand at 1134.336 kb on + strand at 1134.378 kb on + strand at 1134.378 kb on + strand at 1134.378 kb on + strand at 1134.378 kb on + strand at 1134.378 kb on + strand at 1134.415 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 1,134,285 + +0.6 1,134,336 + -0.6 1,134,336 + +0.4 1,134,336 + -0.1 1,134,336 + +1.2 1,134,336 + +0.3 1,134,378 + +0.1 1,134,378 + +0.6 1,134,378 + +1.0 1,134,378 + -1.6 1,134,378 + -1.9 1,134,415 + +1.2
Or see this region's nucleotide sequence