Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS04975

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,028,803	+		DZA65_RS04965	0.71	+1.6
1,028,804	-		DZA65_RS04965	0.71	+0.3
1,028,838	-		DZA65_RS04965	0.75	+1.3
1,028,944	+		DZA65_RS04965	0.87	+0.6
1,028,945	-		DZA65_RS04965	0.87	-0.9
1,028,953	+		DZA65_RS04965	0.88	+0.0
1,028,953	+		DZA65_RS04965	0.88	-0.9
1,028,954	-		DZA65_RS04965	0.88	-2.7
1,028,954	-		DZA65_RS04965	0.88	-0.1
1,028,954	-		DZA65_RS04965	0.88	+0.6
1,028,954	-		DZA65_RS04965	0.88	+0.6
1,028,954	-		DZA65_RS04965	0.88	+0.6
1,028,954	-		DZA65_RS04965	0.88	+1.0
1,028,962	+		DZA65_RS04965	0.89	-0.6
1,028,962	+		DZA65_RS04965	0.89	-0.4
1,028,962	+		DZA65_RS04965	0.89	+0.9
1,028,962	+		DZA65_RS04965	0.89	+1.6
1,028,962	+		DZA65_RS04965	0.89	-1.0
1,028,963	-		DZA65_RS04965	0.89	-1.7
1,029,050	+				-0.5
1,029,050	+				-0.2
1,029,050	+				+0.2
1,029,050	+				-0.4
1,029,050	+				-0.7
1,029,050	+				+0.0
1,029,063	+				-1.0
1,029,063	+				-0.9
1,029,064	-				+1.2
1,029,064	-				-1.7
1,029,077	-				+0.6
1,029,077	-				-0.2
1,029,104	+				-1.4
1,029,265	+		DZA65_RS04970	0.27	-0.2
1,029,297	-		DZA65_RS04970	0.31	+1.2
1,029,402	+		DZA65_RS04970	0.45	+0.8
1,029,402	+		DZA65_RS04970	0.45	-0.4
1,029,486	+		DZA65_RS04970	0.57	-1.2
1,029,607	+		DZA65_RS04970	0.73	-0.9
1,029,607	+		DZA65_RS04970	0.73	+0.0
1,029,607	+		DZA65_RS04970	0.73	-0.7
1,029,607	+		DZA65_RS04970	0.73	+0.0
1,029,607	+		DZA65_RS04970	0.73	-0.6
1,029,607	+		DZA65_RS04970	0.73	+0.9
1,029,608	-		DZA65_RS04970	0.73	-0.7
1,029,608	-		DZA65_RS04970	0.73	-1.2
1,029,608	-		DZA65_RS04970	0.73	+1.9
1,029,608	-		DZA65_RS04970	0.73	-0.2
1,029,608	-		DZA65_RS04970	0.73	+0.2
1,029,608	-		DZA65_RS04970	0.73	+0.0
1,029,608	-		DZA65_RS04970	0.73	-1.4
1,029,608	-		DZA65_RS04970	0.73	+0.0
1,029,641	+		DZA65_RS04970	0.78	-0.2
1,029,641	+		DZA65_RS04970	0.78	-0.7
1,029,641	+		DZA65_RS04970	0.78	-1.0
1,029,642	-		DZA65_RS04970	0.78	-1.4
1,029,642	-		DZA65_RS04970	0.78	+0.8
1,029,642	-		DZA65_RS04970	0.78	-0.6
1,029,642	-		DZA65_RS04970	0.78	-2.1
1,029,642	-		DZA65_RS04970	0.78	+0.0
1,029,642	-		DZA65_RS04970	0.78	+0.2
1,029,642	-		DZA65_RS04970	0.78	-0.7
1,029,642	-		DZA65_RS04970	0.78	-1.7
1,029,642	-		DZA65_RS04970	0.78	-0.4
1,029,645	+		DZA65_RS04970	0.78	-2.2
1,029,645	+		DZA65_RS04970	0.78	+0.0
1,029,645	+		DZA65_RS04970	0.78	-1.0
1,029,645	+		DZA65_RS04970	0.78	+1.6
1,029,645	+		DZA65_RS04970	0.78	+0.8
1,029,646	-		DZA65_RS04970	0.78	+0.8
1,029,646	-		DZA65_RS04970	0.78	-2.2
1,029,646	-		DZA65_RS04970	0.78	+0.0
1,029,646	-		DZA65_RS04970	0.78	+0.5
1,029,646	-		DZA65_RS04970	0.78	-1.7
1,029,646	-		DZA65_RS04970	0.78	-0.4
1,029,646	-		DZA65_RS04970	0.78	-0.3
1,029,733	+				-0.7
1,029,802	+				+0.4
1,029,802	+				-0.7
1,029,803	-				+0.4
1,029,805	+				-1.9
1,029,805	+				-0.4
1,029,805	+				-0.7
1,029,805	+				-0.4
1,029,806	-				-1.0
1,029,834	-				-0.4
1,029,873	-		DZA65_RS04975	0.15	+0.7
1,029,886	-		DZA65_RS04975	0.17	+1.3
1,029,930	+		DZA65_RS04975	0.24	+1.3
1,029,931	-		DZA65_RS04975	0.25	+0.3
1,029,980	-		DZA65_RS04975	0.33	-1.3
1,030,026	+		DZA65_RS04975	0.41	-0.7
1,030,027	-		DZA65_RS04975	0.41	-0.9
1,030,027	-		DZA65_RS04975	0.41	-0.2
1,030,027	-		DZA65_RS04975	0.41	+0.3
1,030,067	+		DZA65_RS04975	0.47	-0.7
1,030,150	+		DZA65_RS04975	0.61	-1.0
1,030,150	+		DZA65_RS04975	0.61	-0.3
1,030,151	-		DZA65_RS04975	0.61	+0.0
1,030,151	-		DZA65_RS04975	0.61	-1.2
1,030,170	+		DZA65_RS04975	0.65	+0.0
1,030,170	+				-0.7
1,030,170	+		DZA65_RS04975	0.65	-2.1
1,030,171	-		DZA65_RS04975	0.65	+1.0
1,030,254	+		DZA65_RS04975	0.79	+1.0
1,030,290	+		DZA65_RS04975	0.84	-1.2
1,030,290	+		DZA65_RS04975	0.84	-0.4
1,030,290	+		DZA65_RS04975	0.84	+1.0
1,030,290	+		DZA65_RS04975	0.84	-0.4
1,030,290	+		DZA65_RS04975	0.84	-0.2
1,030,290	+		DZA65_RS04975	0.84	-0.8
1,030,290	+		DZA65_RS04975	0.84	-1.2
1,030,290	+		DZA65_RS04975	0.84	-0.5
1,030,290	+		DZA65_RS04975	0.84	-0.2
1,030,290	+		DZA65_RS04975	0.84	+1.0
1,030,290	+		DZA65_RS04975	0.84	+0.1
1,030,291	-		DZA65_RS04975	0.85	+0.7
1,030,291	-		DZA65_RS04975	0.85	-2.7
1,030,291	-		DZA65_RS04975	0.85	-0.1
1,030,291	-		DZA65_RS04975	0.85	-0.5
1,030,291	-		DZA65_RS04975	0.85	+0.6
1,030,291	-		DZA65_RS04975	0.85	+0.2
1,030,291	-		DZA65_RS04975	0.85	-1.2
1,030,291	-		DZA65_RS04975	0.85	+0.2
1,030,291	-		DZA65_RS04975	0.85	+0.6
1,030,291	-				+1.3
1,030,291	-		DZA65_RS04975	0.85	+0.0
1,030,292	+		DZA65_RS04975	0.85	+0.8
1,030,292	+		DZA65_RS04975	0.85	+0.4
1,030,292	+		DZA65_RS04975	0.85	+0.2
1,030,292	+		DZA65_RS04975	0.85	+0.0
1,030,292	+		DZA65_RS04975	0.85	-1.2
1,030,292	+		DZA65_RS04975	0.85	-1.6
1,030,293	-		DZA65_RS04975	0.85	+0.6
1,030,293	-		DZA65_RS04975	0.85	-0.5
1,030,293	-		DZA65_RS04975	0.85	+0.0
1,030,293	-		DZA65_RS04975	0.85	+1.0
1,030,293	-		DZA65_RS04975	0.85	+0.6
1,030,377	-				-0.7
1,030,417	-				+0.2
1,030,430	-				-1.6
1,030,492	+		DZA65_RS04980	0.22	-0.6
1,030,492	+		DZA65_RS04980	0.22	+0.6
1,030,493	-		DZA65_RS04980	0.22	+0.6
1,030,493	-		DZA65_RS04980	0.22	-0.4
1,030,493	-		DZA65_RS04980	0.22	-0.6
1,030,516	+		DZA65_RS04980	0.26	+0.3
1,030,517	-		DZA65_RS04980	0.26	-2.0
1,030,517	-		DZA65_RS04980	0.26	+0.1
1,030,517	-		DZA65_RS04980	0.26	-2.0
1,030,631	-		DZA65_RS04980	0.48	+0.3
1,030,641	+		DZA65_RS04980	0.50	+0.4
1,030,641	+		DZA65_RS04980	0.50	+0.8
1,030,691	+		DZA65_RS04980	0.60	-1.0
1,030,692	-		DZA65_RS04980	0.60	-0.9
1,030,784	-		DZA65_RS04980	0.78	+0.6
1,030,789	+		DZA65_RS04980	0.79	-0.0
1,030,789	+		DZA65_RS04980	0.79	-0.3
1,030,789	+		DZA65_RS04980	0.79	-0.4
1,030,790	-		DZA65_RS04980	0.79	-0.5
1,030,790	-		DZA65_RS04980	0.79	-1.8
1,030,790	-		DZA65_RS04980	0.79	-0.7
1,030,790	-		DZA65_RS04980	0.79	+0.4
1,030,868	-				-0.0
1,030,898	+				-1.4
1,030,898	+				-0.3
1,030,898	+				-0.7
1,030,898	+				-2.1
1,030,898	+				-1.9
1,031,059	+		DZA65_RS04985	0.49	-0.0
1,031,060	-		DZA65_RS04985	0.49	-1.4
1,031,060	-		DZA65_RS04985	0.49	+0.4
1,031,060	-				-0.7
1,031,068	+		DZA65_RS04985	0.51	-0.0
1,031,068	+		DZA65_RS04985	0.51	-0.7
1,031,068	+		DZA65_RS04985	0.51	-1.0
1,031,068	+		DZA65_RS04985	0.51	+0.6
1,031,069	-		DZA65_RS04985	0.52	+1.0
1,031,069	-		DZA65_RS04985	0.52	-1.3
1,031,069	-		DZA65_RS04985	0.52	-1.3
1,031,069	-		DZA65_RS04985	0.52	-0.3
1,031,097	+		DZA65_RS04985	0.60	+0.6
1,031,097	+		DZA65_RS04985	0.60	-0.7
1,031,097	+		DZA65_RS04985	0.60	-0.4
1,031,097	+		DZA65_RS04985	0.60	-0.4
1,031,098	-		DZA65_RS04985	0.61	-0.0
1,031,098	-		DZA65_RS04985	0.61	-0.3
1,031,098	-		DZA65_RS04985	0.61	+2.0
1,031,098	-		DZA65_RS04985	0.61	+0.2
1,031,098	-		DZA65_RS04985	0.61	-0.0
1,031,098	-		DZA65_RS04985	0.61	+1.0
1,031,098	-		DZA65_RS04985	0.61	-0.1
1,031,144	-		DZA65_RS04985	0.75	-1.4
1,031,221	+				+0.8
1,031,221	+				-0.7
1,031,221	+				-0.0
1,031,221	+				+0.2
1,031,221	+				-1.2
1,031,221	+				-0.9
1,031,222	-				-0.8
1,031,222	-				-2.2
1,031,222	-				-1.2
1,031,222	-				-0.2
1,031,222	-				-0.0
1,031,225	+				-2.2
1,031,225	+				-1.4
1,031,225	+				+1.0
1,031,225	+				+1.0
1,031,225	+				-0.7
1,031,225	+				+0.6
1,031,225	+				-0.0
1,031,226	-				+1.0
1,031,226	-				-0.1
1,031,226	-				+0.4
1,031,226	-				-0.2
1,031,226	-				-0.7
1,031,226	-				+0.6
1,031,226	-				-0.4
1,031,226	-				-1.1
1,031,226	-				+0.2
1,031,226	-				-0.6
1,031,370	+				-0.3
1,031,370	+				-0.4
1,031,371	-				-0.0