Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS04380 and DZA65_RS04385 are separated by 148 nucleotides DZA65_RS04385 and DZA65_RS04390 are separated by 46 nucleotides DZA65_RS04390 and DZA65_RS04395 are separated by 448 nucleotides
DZA65_RS04380: DZA65_RS04380 - cell division protein ZipA, at 913,406 to 914,305
_RS04380
DZA65_RS04385: DZA65_RS04385 - L-methionine/branched-chain amino acid transporter, at 914,454 to 915,707
_RS04385
DZA65_RS04390: DZA65_RS04390 - accessory factor UbiK family protein, at 915,754 to 916,038
_RS04390
DZA65_RS04395: DZA65_RS04395 - 3,4-dihydroxy-2-butanone-4-phosphate synthase, at 916,487 to 917,140
_RS04395
Position (kb) 914
915
916 Strain fitness (log2 ratio) -2
-1
0
1
2 at 914.274 kb on + strand at 914.274 kb on + strand at 914.275 kb on - strand at 914.275 kb on - strand at 914.275 kb on - strand at 914.278 kb on + strand at 914.278 kb on + strand at 914.278 kb on + strand at 914.278 kb on + strand at 914.279 kb on - strand at 914.279 kb on - strand at 914.279 kb on - strand at 914.279 kb on - strand at 914.279 kb on - strand at 914.284 kb on + strand at 914.284 kb on + strand at 914.287 kb on + strand at 914.287 kb on + strand at 914.287 kb on + strand at 914.288 kb on - strand at 914.288 kb on - strand at 914.288 kb on - strand at 914.288 kb on - strand at 914.290 kb on + strand at 914.290 kb on + strand at 914.290 kb on + strand at 914.324 kb on + strand at 914.324 kb on + strand at 914.324 kb on + strand at 914.324 kb on + strand at 914.324 kb on + strand at 914.324 kb on + strand at 914.324 kb on + strand at 914.324 kb on + strand at 914.324 kb on + strand at 914.324 kb on + strand at 914.324 kb on + strand at 914.324 kb on + strand at 914.324 kb on + strand at 914.325 kb on - strand at 914.325 kb on - strand at 914.325 kb on - strand at 914.325 kb on - strand at 914.325 kb on - strand at 914.325 kb on - strand at 914.325 kb on - strand at 914.325 kb on - strand at 914.325 kb on - strand at 914.325 kb on - strand at 914.330 kb on + strand at 914.330 kb on + strand at 914.331 kb on - strand at 914.331 kb on - strand at 914.331 kb on - strand at 914.365 kb on - strand at 914.365 kb on - strand at 914.419 kb on + strand at 914.465 kb on + strand at 914.466 kb on - strand at 914.468 kb on + strand at 914.468 kb on + strand at 914.468 kb on + strand at 914.468 kb on + strand at 914.468 kb on + strand at 914.468 kb on + strand at 914.468 kb on + strand at 914.469 kb on - strand at 914.469 kb on - strand at 914.469 kb on - strand at 914.469 kb on - strand at 914.469 kb on - strand at 914.473 kb on + strand at 914.682 kb on + strand, within DZA65_RS04385 at 914.682 kb on + strand, within DZA65_RS04385 at 914.682 kb on + strand, within DZA65_RS04385 at 914.682 kb on + strand, within DZA65_RS04385 at 914.682 kb on + strand, within DZA65_RS04385 at 914.903 kb on - strand, within DZA65_RS04385 at 914.903 kb on - strand, within DZA65_RS04385 at 914.903 kb on - strand, within DZA65_RS04385 at 914.966 kb on + strand, within DZA65_RS04385 at 915.130 kb on + strand, within DZA65_RS04385 at 915.130 kb on + strand, within DZA65_RS04385 at 915.130 kb on + strand, within DZA65_RS04385 at 915.130 kb on + strand, within DZA65_RS04385 at 915.130 kb on + strand, within DZA65_RS04385 at 915.131 kb on - strand, within DZA65_RS04385 at 915.131 kb on - strand, within DZA65_RS04385 at 915.167 kb on + strand, within DZA65_RS04385 at 915.167 kb on + strand, within DZA65_RS04385 at 915.167 kb on + strand, within DZA65_RS04385 at 915.167 kb on + strand, within DZA65_RS04385 at 915.167 kb on + strand, within DZA65_RS04385 at 915.167 kb on + strand, within DZA65_RS04385 at 915.167 kb on + strand, within DZA65_RS04385 at 915.168 kb on - strand, within DZA65_RS04385 at 915.168 kb on - strand, within DZA65_RS04385 at 915.168 kb on - strand, within DZA65_RS04385 at 915.168 kb on - strand, within DZA65_RS04385 at 915.168 kb on - strand, within DZA65_RS04385 at 915.168 kb on - strand, within DZA65_RS04385 at 915.168 kb on - strand, within DZA65_RS04385 at 915.168 kb on - strand, within DZA65_RS04385 at 915.168 kb on - strand, within DZA65_RS04385 at 915.168 kb on - strand, within DZA65_RS04385 at 915.314 kb on + strand, within DZA65_RS04385 at 915.314 kb on + strand at 915.314 kb on + strand, within DZA65_RS04385 at 915.314 kb on + strand, within DZA65_RS04385 at 915.314 kb on + strand, within DZA65_RS04385 at 915.314 kb on + strand, within DZA65_RS04385 at 915.315 kb on - strand, within DZA65_RS04385 at 915.315 kb on - strand, within DZA65_RS04385 at 915.315 kb on - strand, within DZA65_RS04385 at 915.315 kb on - strand, within DZA65_RS04385 at 915.315 kb on - strand, within DZA65_RS04385 at 915.315 kb on - strand, within DZA65_RS04385 at 915.318 kb on + strand, within DZA65_RS04385 at 915.318 kb on + strand, within DZA65_RS04385 at 915.318 kb on + strand, within DZA65_RS04385 at 915.318 kb on + strand, within DZA65_RS04385 at 915.318 kb on + strand, within DZA65_RS04385 at 915.318 kb on + strand, within DZA65_RS04385 at 915.318 kb on + strand, within DZA65_RS04385 at 915.318 kb on + strand, within DZA65_RS04385 at 915.318 kb on + strand, within DZA65_RS04385 at 915.318 kb on + strand, within DZA65_RS04385 at 915.318 kb on + strand, within DZA65_RS04385 at 915.318 kb on + strand, within DZA65_RS04385 at 915.318 kb on + strand, within DZA65_RS04385 at 915.319 kb on - strand, within DZA65_RS04385 at 915.319 kb on - strand, within DZA65_RS04385 at 915.319 kb on - strand, within DZA65_RS04385 at 915.319 kb on - strand, within DZA65_RS04385 at 915.319 kb on - strand, within DZA65_RS04385 at 915.319 kb on - strand, within DZA65_RS04385 at 915.319 kb on - strand, within DZA65_RS04385 at 915.319 kb on - strand, within DZA65_RS04385 at 915.319 kb on - strand, within DZA65_RS04385 at 915.319 kb on - strand, within DZA65_RS04385 at 915.319 kb on - strand, within DZA65_RS04385 at 915.319 kb on - strand, within DZA65_RS04385 at 915.319 kb on - strand, within DZA65_RS04385 at 915.319 kb on - strand, within DZA65_RS04385 at 915.321 kb on - strand, within DZA65_RS04385 at 915.395 kb on + strand, within DZA65_RS04385 at 915.452 kb on + strand, within DZA65_RS04385 at 915.452 kb on + strand, within DZA65_RS04385 at 915.452 kb on + strand, within DZA65_RS04385 at 915.452 kb on + strand, within DZA65_RS04385 at 915.453 kb on - strand, within DZA65_RS04385 at 915.453 kb on - strand, within DZA65_RS04385 at 915.457 kb on - strand at 915.519 kb on + strand, within DZA65_RS04385 at 915.519 kb on + strand, within DZA65_RS04385 at 915.519 kb on + strand, within DZA65_RS04385 at 915.520 kb on - strand, within DZA65_RS04385 at 915.520 kb on - strand, within DZA65_RS04385 at 915.523 kb on + strand, within DZA65_RS04385 at 915.523 kb on + strand, within DZA65_RS04385 at 915.523 kb on + strand, within DZA65_RS04385 at 915.523 kb on + strand, within DZA65_RS04385 at 915.524 kb on - strand, within DZA65_RS04385 at 915.524 kb on - strand, within DZA65_RS04385 at 915.524 kb on - strand, within DZA65_RS04385 at 915.524 kb on - strand, within DZA65_RS04385 at 915.524 kb on - strand, within DZA65_RS04385 at 915.524 kb on - strand, within DZA65_RS04385 at 915.701 kb on + strand at 915.755 kb on + strand at 915.755 kb on + strand at 915.756 kb on - strand at 915.822 kb on + strand, within DZA65_RS04390 at 915.822 kb on + strand, within DZA65_RS04390 at 915.822 kb on + strand, within DZA65_RS04390 at 915.822 kb on + strand, within DZA65_RS04390 at 915.822 kb on + strand, within DZA65_RS04390 at 915.823 kb on - strand, within DZA65_RS04390 at 915.823 kb on - strand, within DZA65_RS04390 at 915.823 kb on - strand, within DZA65_RS04390 at 915.823 kb on - strand, within DZA65_RS04390 at 915.823 kb on - strand, within DZA65_RS04390 at 915.953 kb on - strand, within DZA65_RS04390 at 916.073 kb on + strand at 916.073 kb on + strand at 916.074 kb on - strand at 916.074 kb on - strand at 916.074 kb on - strand at 916.074 kb on - strand at 916.075 kb on + strand at 916.075 kb on + strand at 916.075 kb on + strand at 916.076 kb on - strand at 916.076 kb on - strand at 916.076 kb on - strand at 916.076 kb on - strand at 916.086 kb on + strand at 916.086 kb on + strand at 916.086 kb on + strand at 916.105 kb on + strand at 916.148 kb on + strand at 916.148 kb on + strand at 916.149 kb on - strand at 916.149 kb on - strand at 916.149 kb on - strand at 916.149 kb on - strand at 916.149 kb on - strand at 916.149 kb on - strand at 916.159 kb on + strand at 916.188 kb on + strand at 916.188 kb on + strand at 916.190 kb on + strand at 916.190 kb on + strand at 916.193 kb on + strand at 916.193 kb on + strand at 916.193 kb on + strand at 916.193 kb on + strand at 916.193 kb on + strand at 916.203 kb on + strand at 916.315 kb on + strand at 916.336 kb on + strand at 916.466 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 914,274 + -1.0 914,274 + +0.1 914,275 - +2.6 914,275 - -2.1 914,275 - -1.6 914,278 + -1.4 914,278 + -1.3 914,278 + +0.3 914,278 + -1.9 914,279 - +0.6 914,279 - -1.6 914,279 - -1.0 914,279 - -1.7 914,279 - -1.2 914,284 + -0.4 914,284 + +0.3 914,287 + -0.6 914,287 + -0.7 914,287 + -1.0 914,288 - -0.8 914,288 - -1.9 914,288 - -2.1 914,288 - -1.7 914,290 + -0.4 914,290 + +0.6 914,290 + -2.6 914,324 + -0.0 914,324 + +0.3 914,324 + +0.3 914,324 + -0.5 914,324 + -0.0 914,324 + -0.9 914,324 + +0.7 914,324 + -0.1 914,324 + -1.3 914,324 + -0.3 914,324 + +0.3 914,324 + +0.5 914,324 + -0.6 914,325 - +1.0 914,325 - -0.3 914,325 - -0.8 914,325 - -1.0 914,325 - -0.8 914,325 - +0.2 914,325 - -1.6 914,325 - -2.4 914,325 - -0.4 914,325 - +1.9 914,330 + +0.4 914,330 + -0.4 914,331 - -0.6 914,331 - -0.9 914,331 - -1.2 914,365 - -0.3 914,365 - -0.3 914,419 + +1.6 914,465 + +0.3 914,466 - -0.8 914,468 + +1.2 914,468 + +0.3 914,468 + -2.3 914,468 + +0.3 914,468 + -0.7 914,468 + -0.0 914,468 + +0.3 914,469 - -2.3 914,469 - -0.0 914,469 - -0.1 914,469 - -0.0 914,469 - -2.0 914,473 + +1.4 914,682 + DZA65_RS04385 0.18 +1.2 914,682 + DZA65_RS04385 0.18 +0.4 914,682 + DZA65_RS04385 0.18 -1.0 914,682 + DZA65_RS04385 0.18 -0.9 914,682 + DZA65_RS04385 0.18 -1.0 914,903 - DZA65_RS04385 0.36 -0.0 914,903 - DZA65_RS04385 0.36 -0.6 914,903 - DZA65_RS04385 0.36 +0.6 914,966 + DZA65_RS04385 0.41 -1.2 915,130 + DZA65_RS04385 0.54 -1.0 915,130 + DZA65_RS04385 0.54 -0.0 915,130 + DZA65_RS04385 0.54 +0.7 915,130 + DZA65_RS04385 0.54 -0.6 915,130 + DZA65_RS04385 0.54 -0.5 915,131 - DZA65_RS04385 0.54 -0.7 915,131 - DZA65_RS04385 0.54 -0.2 915,167 + DZA65_RS04385 0.57 -1.2 915,167 + DZA65_RS04385 0.57 -1.7 915,167 + DZA65_RS04385 0.57 -0.4 915,167 + DZA65_RS04385 0.57 -0.9 915,167 + DZA65_RS04385 0.57 -0.2 915,167 + DZA65_RS04385 0.57 +0.7 915,167 + DZA65_RS04385 0.57 -1.9 915,168 - DZA65_RS04385 0.57 -1.1 915,168 - DZA65_RS04385 0.57 -1.5 915,168 - DZA65_RS04385 0.57 +0.3 915,168 - DZA65_RS04385 0.57 -1.6 915,168 - DZA65_RS04385 0.57 -0.2 915,168 - DZA65_RS04385 0.57 +1.8 915,168 - DZA65_RS04385 0.57 +0.2 915,168 - DZA65_RS04385 0.57 -0.2 915,168 - DZA65_RS04385 0.57 -1.6 915,168 - DZA65_RS04385 0.57 -1.2 915,314 + DZA65_RS04385 0.69 -1.0 915,314 + -0.0 915,314 + DZA65_RS04385 0.69 +0.3 915,314 + DZA65_RS04385 0.69 +0.6 915,314 + DZA65_RS04385 0.69 +1.3 915,314 + DZA65_RS04385 0.69 +1.2 915,315 - DZA65_RS04385 0.69 -0.7 915,315 - DZA65_RS04385 0.69 -0.6 915,315 - DZA65_RS04385 0.69 -0.6 915,315 - DZA65_RS04385 0.69 -0.7 915,315 - DZA65_RS04385 0.69 +0.8 915,315 - DZA65_RS04385 0.69 -0.6 915,318 + DZA65_RS04385 0.69 +0.6 915,318 + DZA65_RS04385 0.69 +0.3 915,318 + DZA65_RS04385 0.69 -1.4 915,318 + DZA65_RS04385 0.69 -0.4 915,318 + DZA65_RS04385 0.69 +0.8 915,318 + DZA65_RS04385 0.69 +0.8 915,318 + DZA65_RS04385 0.69 -0.7 915,318 + DZA65_RS04385 0.69 -1.2 915,318 + DZA65_RS04385 0.69 +0.6 915,318 + DZA65_RS04385 0.69 -0.7 915,318 + DZA65_RS04385 0.69 -0.7 915,318 + DZA65_RS04385 0.69 -0.0 915,318 + DZA65_RS04385 0.69 -1.4 915,319 - DZA65_RS04385 0.69 +0.4 915,319 - DZA65_RS04385 0.69 -0.0 915,319 - DZA65_RS04385 0.69 -1.5 915,319 - DZA65_RS04385 0.69 -1.4 915,319 - DZA65_RS04385 0.69 -0.8 915,319 - DZA65_RS04385 0.69 -1.0 915,319 - DZA65_RS04385 0.69 +1.0 915,319 - DZA65_RS04385 0.69 -1.2 915,319 - DZA65_RS04385 0.69 -1.6 915,319 - DZA65_RS04385 0.69 -1.1 915,319 - DZA65_RS04385 0.69 -0.1 915,319 - DZA65_RS04385 0.69 -0.9 915,319 - DZA65_RS04385 0.69 -0.4 915,319 - DZA65_RS04385 0.69 -1.3 915,321 - DZA65_RS04385 0.69 +0.3 915,395 + DZA65_RS04385 0.75 -0.2 915,452 + DZA65_RS04385 0.80 -0.2 915,452 + DZA65_RS04385 0.80 -2.2 915,452 + DZA65_RS04385 0.80 -0.8 915,452 + DZA65_RS04385 0.80 -2.4 915,453 - DZA65_RS04385 0.80 -1.1 915,453 - DZA65_RS04385 0.80 +1.0 915,457 - +1.0 915,519 + DZA65_RS04385 0.85 -0.5 915,519 + DZA65_RS04385 0.85 +0.0 915,519 + DZA65_RS04385 0.85 -1.2 915,520 - DZA65_RS04385 0.85 -1.4 915,520 - DZA65_RS04385 0.85 -0.6 915,523 + DZA65_RS04385 0.85 +1.6 915,523 + DZA65_RS04385 0.85 +0.5 915,523 + DZA65_RS04385 0.85 -1.6 915,523 + DZA65_RS04385 0.85 +1.6 915,524 - DZA65_RS04385 0.85 +0.0 915,524 - DZA65_RS04385 0.85 -0.6 915,524 - DZA65_RS04385 0.85 +0.0 915,524 - DZA65_RS04385 0.85 -0.4 915,524 - DZA65_RS04385 0.85 -0.3 915,524 - DZA65_RS04385 0.85 -0.5 915,701 + -0.3 915,755 + -2.4 915,755 + +0.6 915,756 - -1.0 915,822 + DZA65_RS04390 0.24 +0.0 915,822 + DZA65_RS04390 0.24 -1.8 915,822 + DZA65_RS04390 0.24 -0.7 915,822 + DZA65_RS04390 0.24 -1.2 915,822 + DZA65_RS04390 0.24 +0.4 915,823 - DZA65_RS04390 0.24 +0.3 915,823 - DZA65_RS04390 0.24 -1.2 915,823 - DZA65_RS04390 0.24 -0.4 915,823 - DZA65_RS04390 0.24 -1.4 915,823 - DZA65_RS04390 0.24 +1.0 915,953 - DZA65_RS04390 0.70 +0.3 916,073 + -1.6 916,073 + -0.9 916,074 - +0.6 916,074 - +1.2 916,074 - -1.7 916,074 - -0.4 916,075 + -0.4 916,075 + -0.1 916,075 + +1.0 916,076 - +0.4 916,076 - -0.6 916,076 - -0.6 916,076 - +0.6 916,086 + -1.9 916,086 + +0.3 916,086 + -0.5 916,105 + +1.0 916,148 + -0.9 916,148 + +0.2 916,149 - -0.7 916,149 - +1.3 916,149 - -1.6 916,149 - -1.2 916,149 - -0.8 916,149 - +0.1 916,159 + -1.0 916,188 + -1.5 916,188 + -0.7 916,190 + -2.1 916,190 + -1.4 916,193 + -1.0 916,193 + -1.0 916,193 + -1.1 916,193 + -1.7 916,193 + -1.9 916,203 + -0.4 916,315 + -0.2 916,336 + +0.0 916,466 + -0.2
Or see this region's nucleotide sequence