Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS02450 and DZA65_RS02455 overlap by 4 nucleotides DZA65_RS02455 and DZA65_RS02460 are separated by 39 nucleotides DZA65_RS02460 and DZA65_RS02465 are separated by 234 nucleotides
DZA65_RS02450: DZA65_RS02450 - 2-octaprenyl-6-methoxyphenyl hydroxylase, at 528,311 to 529,489
_RS02450
DZA65_RS02455: DZA65_RS02455 - Xaa-Pro aminopeptidase, at 529,486 to 530,814
_RS02455
DZA65_RS02460: DZA65_RS02460 - YecA family protein, at 530,854 to 531,438
_RS02460
DZA65_RS02465: DZA65_RS02465 - cell division protein ZapA, at 531,673 to 532,002
_RS02465
Position (kb) 529
530
531 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 529.623 kb on - strand, within DZA65_RS02455 at 529.656 kb on - strand, within DZA65_RS02455 at 529.656 kb on - strand, within DZA65_RS02455 at 529.656 kb on - strand, within DZA65_RS02455 at 529.656 kb on - strand, within DZA65_RS02455 at 529.656 kb on - strand, within DZA65_RS02455 at 529.656 kb on - strand, within DZA65_RS02455 at 529.656 kb on - strand, within DZA65_RS02455 at 529.656 kb on - strand, within DZA65_RS02455 at 529.656 kb on - strand, within DZA65_RS02455 at 529.656 kb on - strand, within DZA65_RS02455 at 529.774 kb on - strand, within DZA65_RS02455 at 529.774 kb on - strand, within DZA65_RS02455 at 529.774 kb on - strand, within DZA65_RS02455 at 529.879 kb on + strand, within DZA65_RS02455 at 530.016 kb on - strand, within DZA65_RS02455 at 530.025 kb on - strand, within DZA65_RS02455 at 530.088 kb on - strand, within DZA65_RS02455 at 530.088 kb on - strand, within DZA65_RS02455 at 530.088 kb on - strand, within DZA65_RS02455 at 530.088 kb on - strand, within DZA65_RS02455 at 530.088 kb on - strand, within DZA65_RS02455 at 530.133 kb on - strand, within DZA65_RS02455 at 530.133 kb on - strand, within DZA65_RS02455 at 530.133 kb on - strand, within DZA65_RS02455 at 530.133 kb on - strand, within DZA65_RS02455 at 530.133 kb on - strand, within DZA65_RS02455 at 530.193 kb on - strand, within DZA65_RS02455 at 530.305 kb on - strand, within DZA65_RS02455 at 530.305 kb on - strand at 530.305 kb on - strand, within DZA65_RS02455 at 530.312 kb on - strand, within DZA65_RS02455 at 530.415 kb on - strand, within DZA65_RS02455 at 530.439 kb on - strand, within DZA65_RS02455 at 530.439 kb on - strand, within DZA65_RS02455 at 530.670 kb on - strand, within DZA65_RS02455 at 530.700 kb on - strand at 530.716 kb on - strand at 530.716 kb on - strand at 530.799 kb on - strand at 530.799 kb on - strand at 530.799 kb on - strand at 530.799 kb on - strand at 530.816 kb on - strand at 530.855 kb on + strand at 530.856 kb on - strand at 530.856 kb on - strand at 530.938 kb on + strand, within DZA65_RS02460 at 530.938 kb on + strand, within DZA65_RS02460 at 530.939 kb on - strand, within DZA65_RS02460 at 530.939 kb on - strand, within DZA65_RS02460 at 530.939 kb on - strand, within DZA65_RS02460 at 530.939 kb on - strand, within DZA65_RS02460 at 530.942 kb on + strand, within DZA65_RS02460 at 530.942 kb on + strand, within DZA65_RS02460 at 530.942 kb on + strand, within DZA65_RS02460 at 530.942 kb on + strand, within DZA65_RS02460 at 530.942 kb on + strand, within DZA65_RS02460 at 530.943 kb on - strand, within DZA65_RS02460 at 530.943 kb on - strand, within DZA65_RS02460 at 530.943 kb on - strand, within DZA65_RS02460 at 530.943 kb on - strand, within DZA65_RS02460 at 530.943 kb on - strand, within DZA65_RS02460 at 530.943 kb on - strand, within DZA65_RS02460 at 530.943 kb on - strand, within DZA65_RS02460 at 531.022 kb on + strand, within DZA65_RS02460 at 531.022 kb on + strand, within DZA65_RS02460 at 531.022 kb on + strand, within DZA65_RS02460 at 531.023 kb on - strand, within DZA65_RS02460 at 531.023 kb on - strand, within DZA65_RS02460 at 531.023 kb on - strand at 531.023 kb on - strand, within DZA65_RS02460 at 531.023 kb on - strand, within DZA65_RS02460 at 531.225 kb on - strand, within DZA65_RS02460 at 531.225 kb on - strand, within DZA65_RS02460 at 531.225 kb on - strand, within DZA65_RS02460 at 531.225 kb on - strand, within DZA65_RS02460 at 531.331 kb on + strand, within DZA65_RS02460 at 531.331 kb on + strand, within DZA65_RS02460 at 531.332 kb on - strand, within DZA65_RS02460 at 531.332 kb on - strand, within DZA65_RS02460 at 531.392 kb on - strand at 531.392 kb on - strand at 531.423 kb on + strand at 531.423 kb on + strand at 531.423 kb on + strand at 531.423 kb on + strand at 531.423 kb on + strand at 531.424 kb on - strand at 531.424 kb on - strand at 531.430 kb on + strand at 531.431 kb on - strand at 531.431 kb on - strand at 531.432 kb on + strand at 531.432 kb on + strand at 531.433 kb on - strand at 531.433 kb on - strand at 531.433 kb on - strand at 531.433 kb on - strand at 531.473 kb on - strand at 531.473 kb on - strand at 531.473 kb on - strand at 531.478 kb on - strand at 531.478 kb on - strand at 531.496 kb on + strand at 531.497 kb on - strand at 531.499 kb on - strand at 531.536 kb on + strand at 531.536 kb on + strand at 531.536 kb on + strand at 531.536 kb on + strand at 531.536 kb on + strand at 531.536 kb on + strand at 531.536 kb on + strand at 531.536 kb on + strand at 531.536 kb on + strand at 531.536 kb on + strand at 531.537 kb on - strand at 531.537 kb on - strand at 531.537 kb on - strand at 531.537 kb on - strand at 531.537 kb on - strand at 531.537 kb on - strand at 531.537 kb on - strand at 531.537 kb on - strand at 531.543 kb on + strand at 531.543 kb on + strand at 531.544 kb on - strand at 531.544 kb on - strand at 531.544 kb on - strand at 531.544 kb on - strand at 531.544 kb on - strand at 531.546 kb on + strand at 531.546 kb on + strand at 531.546 kb on + strand at 531.547 kb on - strand at 531.547 kb on - strand at 531.547 kb on - strand at 531.547 kb on - strand at 531.552 kb on + strand at 531.552 kb on + strand at 531.552 kb on + strand at 531.552 kb on + strand at 531.553 kb on - strand at 531.553 kb on - strand at 531.553 kb on - strand at 531.553 kb on - strand at 531.554 kb on + strand at 531.554 kb on + strand at 531.554 kb on + strand at 531.554 kb on + strand at 531.554 kb on + strand at 531.554 kb on + strand at 531.554 kb on + strand at 531.554 kb on + strand at 531.554 kb on + strand at 531.554 kb on + strand at 531.554 kb on + strand at 531.554 kb on + strand at 531.554 kb on + strand at 531.554 kb on + strand at 531.554 kb on + strand at 531.555 kb on - strand at 531.555 kb on - strand at 531.555 kb on - strand at 531.555 kb on - strand at 531.555 kb on - strand at 531.555 kb on - strand at 531.555 kb on - strand at 531.555 kb on - strand at 531.555 kb on - strand at 531.555 kb on - strand at 531.555 kb on - strand at 531.555 kb on - strand at 531.555 kb on - strand at 531.555 kb on - strand at 531.568 kb on + strand at 531.568 kb on + strand at 531.579 kb on + strand at 531.579 kb on + strand at 531.579 kb on + strand at 531.579 kb on + strand at 531.580 kb on - strand at 531.580 kb on - strand at 531.581 kb on + strand at 531.581 kb on + strand at 531.581 kb on + strand at 531.581 kb on + strand at 531.581 kb on + strand at 531.581 kb on + strand at 531.581 kb on + strand at 531.581 kb on + strand at 531.581 kb on + strand at 531.581 kb on + strand at 531.581 kb on + strand at 531.583 kb on + strand at 531.583 kb on + strand at 531.583 kb on + strand at 531.583 kb on + strand at 531.774 kb on + strand, within DZA65_RS02465
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 529,623 - DZA65_RS02455 0.10 -1.4 529,656 - DZA65_RS02455 0.13 +0.2 529,656 - DZA65_RS02455 0.13 -1.8 529,656 - DZA65_RS02455 0.13 -0.2 529,656 - DZA65_RS02455 0.13 -0.1 529,656 - DZA65_RS02455 0.13 +0.8 529,656 - DZA65_RS02455 0.13 +0.1 529,656 - DZA65_RS02455 0.13 +0.3 529,656 - DZA65_RS02455 0.13 +0.3 529,656 - DZA65_RS02455 0.13 -0.1 529,656 - DZA65_RS02455 0.13 -0.8 529,774 - DZA65_RS02455 0.22 -0.7 529,774 - DZA65_RS02455 0.22 -2.2 529,774 - DZA65_RS02455 0.22 +0.2 529,879 + DZA65_RS02455 0.30 -1.0 530,016 - DZA65_RS02455 0.40 -0.4 530,025 - DZA65_RS02455 0.41 +1.1 530,088 - DZA65_RS02455 0.45 -1.1 530,088 - DZA65_RS02455 0.45 -1.7 530,088 - DZA65_RS02455 0.45 +0.6 530,088 - DZA65_RS02455 0.45 -2.3 530,088 - DZA65_RS02455 0.45 -3.3 530,133 - DZA65_RS02455 0.49 -2.1 530,133 - DZA65_RS02455 0.49 +0.2 530,133 - DZA65_RS02455 0.49 -1.4 530,133 - DZA65_RS02455 0.49 -0.7 530,133 - DZA65_RS02455 0.49 -1.7 530,193 - DZA65_RS02455 0.53 -0.1 530,305 - DZA65_RS02455 0.62 -0.9 530,305 - +1.6 530,305 - DZA65_RS02455 0.62 -2.7 530,312 - DZA65_RS02455 0.62 -0.7 530,415 - DZA65_RS02455 0.70 -0.8 530,439 - DZA65_RS02455 0.72 -1.1 530,439 - DZA65_RS02455 0.72 -0.7 530,670 - DZA65_RS02455 0.89 -1.4 530,700 - -1.2 530,716 - -1.4 530,716 - -3.4 530,799 - -0.2 530,799 - -0.8 530,799 - +0.1 530,799 - +0.6 530,816 - +0.5 530,855 + -0.4 530,856 - +0.1 530,856 - +1.8 530,938 + DZA65_RS02460 0.14 -1.3 530,938 + DZA65_RS02460 0.14 -2.4 530,939 - DZA65_RS02460 0.15 -0.2 530,939 - DZA65_RS02460 0.15 -0.5 530,939 - DZA65_RS02460 0.15 +0.6 530,939 - DZA65_RS02460 0.15 -1.2 530,942 + DZA65_RS02460 0.15 -1.5 530,942 + DZA65_RS02460 0.15 +0.2 530,942 + DZA65_RS02460 0.15 -1.8 530,942 + DZA65_RS02460 0.15 -0.6 530,942 + DZA65_RS02460 0.15 -0.7 530,943 - DZA65_RS02460 0.15 -0.1 530,943 - DZA65_RS02460 0.15 +0.6 530,943 - DZA65_RS02460 0.15 -0.8 530,943 - DZA65_RS02460 0.15 -0.2 530,943 - DZA65_RS02460 0.15 +0.9 530,943 - DZA65_RS02460 0.15 +1.1 530,943 - DZA65_RS02460 0.15 +0.1 531,022 + DZA65_RS02460 0.29 -0.6 531,022 + DZA65_RS02460 0.29 -1.2 531,022 + DZA65_RS02460 0.29 -0.9 531,023 - DZA65_RS02460 0.29 +0.2 531,023 - DZA65_RS02460 0.29 -1.4 531,023 - +2.6 531,023 - DZA65_RS02460 0.29 -0.5 531,023 - DZA65_RS02460 0.29 -1.2 531,225 - DZA65_RS02460 0.63 +0.4 531,225 - DZA65_RS02460 0.63 +0.2 531,225 - DZA65_RS02460 0.63 +0.4 531,225 - DZA65_RS02460 0.63 -0.7 531,331 + DZA65_RS02460 0.82 -0.7 531,331 + DZA65_RS02460 0.82 -3.2 531,332 - DZA65_RS02460 0.82 +0.4 531,332 - DZA65_RS02460 0.82 +0.6 531,392 - +0.6 531,392 - -0.9 531,423 + -0.2 531,423 + -1.2 531,423 + -1.4 531,423 + -1.4 531,423 + -0.9 531,424 - +0.4 531,424 - -0.9 531,430 + +0.1 531,431 - -1.2 531,431 - -0.4 531,432 + -1.8 531,432 + -0.7 531,433 - -1.5 531,433 - -1.9 531,433 - -0.9 531,433 - +0.1 531,473 - -1.8 531,473 - +0.6 531,473 - -0.2 531,478 - +0.2 531,478 - -0.8 531,496 + -0.7 531,497 - -0.4 531,499 - +0.4 531,536 + +0.1 531,536 + -1.1 531,536 + -2.5 531,536 + -1.5 531,536 + -0.9 531,536 + -0.4 531,536 + -1.4 531,536 + -0.6 531,536 + -0.9 531,536 + +0.1 531,537 - -0.1 531,537 - +0.1 531,537 - -0.2 531,537 - -0.9 531,537 - -0.0 531,537 - +0.2 531,537 - -0.8 531,537 - -0.4 531,543 + -0.7 531,543 + +0.1 531,544 - -0.7 531,544 - +0.2 531,544 - +0.5 531,544 - -2.7 531,544 - +1.6 531,546 + -0.5 531,546 + +2.0 531,546 + -0.6 531,547 - -0.9 531,547 - +0.3 531,547 - +1.2 531,547 - +0.2 531,552 + +2.2 531,552 + -0.4 531,552 + -0.8 531,552 + +0.1 531,553 - +0.4 531,553 - -0.7 531,553 - -0.3 531,553 - -0.2 531,554 + +0.1 531,554 + +1.1 531,554 + -0.2 531,554 + +0.3 531,554 + -0.4 531,554 + +0.1 531,554 + -0.8 531,554 + -2.9 531,554 + +0.3 531,554 + -0.7 531,554 + +0.1 531,554 + -0.5 531,554 + -1.3 531,554 + -0.1 531,554 + -0.7 531,555 - -1.2 531,555 - +0.3 531,555 - -0.4 531,555 - -1.3 531,555 - +1.2 531,555 - -0.4 531,555 - -1.7 531,555 - -0.4 531,555 - -0.7 531,555 - -0.3 531,555 - -0.5 531,555 - +0.0 531,555 - -0.3 531,555 - -0.3 531,568 + -1.5 531,568 + +0.4 531,579 + -0.9 531,579 + -1.9 531,579 + +0.1 531,579 + -1.5 531,580 - -1.2 531,580 - +0.6 531,581 + -1.2 531,581 + -1.4 531,581 + +0.4 531,581 + -0.2 531,581 + -1.1 531,581 + -1.4 531,581 + -0.4 531,581 + -2.1 531,581 + -1.2 531,581 + -0.9 531,581 + -1.2 531,583 + -0.2 531,583 + -0.7 531,583 + -1.9 531,583 + -1.2 531,774 + DZA65_RS02465 0.31 +1.1
Or see this region's nucleotide sequence