Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS02415 and DZA65_RS02420 overlap by 4 nucleotides DZA65_RS02420 and DZA65_RS02425 are separated by 76 nucleotides
DZA65_RS02415: DZA65_RS02415 - ABC transporter ATP-binding protein, at 520,363 to 522,063
_RS02415
DZA65_RS02420: DZA65_RS02420 - ABC transporter permease, at 522,060 to 522,899
_RS02420
DZA65_RS02425: DZA65_RS02425 - ABC transporter permease, at 522,976 to 523,941
_RS02425
Position (kb) 522
523 Strain fitness (log2 ratio) -2
-1
0
1
2 at 521.143 kb on + strand, within DZA65_RS02415 at 521.143 kb on + strand, within DZA65_RS02415 at 521.144 kb on - strand, within DZA65_RS02415 at 521.144 kb on - strand, within DZA65_RS02415 at 521.286 kb on + strand, within DZA65_RS02415 at 521.286 kb on + strand, within DZA65_RS02415 at 521.287 kb on - strand, within DZA65_RS02415 at 521.288 kb on + strand, within DZA65_RS02415 at 521.288 kb on + strand, within DZA65_RS02415 at 521.288 kb on + strand, within DZA65_RS02415 at 521.288 kb on + strand, within DZA65_RS02415 at 521.288 kb on + strand, within DZA65_RS02415 at 521.288 kb on + strand, within DZA65_RS02415 at 521.288 kb on + strand, within DZA65_RS02415 at 521.289 kb on - strand, within DZA65_RS02415 at 521.289 kb on - strand, within DZA65_RS02415 at 521.289 kb on - strand, within DZA65_RS02415 at 521.289 kb on - strand, within DZA65_RS02415 at 521.413 kb on + strand, within DZA65_RS02415 at 521.414 kb on - strand, within DZA65_RS02415 at 521.758 kb on + strand, within DZA65_RS02415 at 521.758 kb on + strand, within DZA65_RS02415 at 521.759 kb on - strand, within DZA65_RS02415 at 521.759 kb on - strand, within DZA65_RS02415 at 522.012 kb on + strand at 522.012 kb on + strand at 522.013 kb on - strand at 522.019 kb on + strand at 522.034 kb on + strand at 522.034 kb on + strand at 522.035 kb on - strand at 522.035 kb on - strand at 522.035 kb on - strand at 522.038 kb on - strand at 522.090 kb on + strand at 522.090 kb on + strand at 522.090 kb on + strand at 522.090 kb on + strand at 522.090 kb on + strand at 522.090 kb on + strand at 522.090 kb on + strand at 522.091 kb on - strand at 522.091 kb on - strand at 522.091 kb on - strand at 522.091 kb on - strand at 522.329 kb on + strand, within DZA65_RS02420 at 522.330 kb on - strand, within DZA65_RS02420 at 522.330 kb on - strand, within DZA65_RS02420 at 522.346 kb on + strand, within DZA65_RS02420 at 522.346 kb on + strand, within DZA65_RS02420 at 522.346 kb on + strand, within DZA65_RS02420 at 522.346 kb on + strand, within DZA65_RS02420 at 522.346 kb on + strand, within DZA65_RS02420 at 522.346 kb on + strand, within DZA65_RS02420 at 522.347 kb on - strand, within DZA65_RS02420 at 522.347 kb on - strand, within DZA65_RS02420 at 522.347 kb on - strand, within DZA65_RS02420 at 522.347 kb on - strand, within DZA65_RS02420 at 522.347 kb on - strand, within DZA65_RS02420 at 522.347 kb on - strand, within DZA65_RS02420 at 522.470 kb on + strand, within DZA65_RS02420 at 522.470 kb on + strand, within DZA65_RS02420 at 522.470 kb on + strand, within DZA65_RS02420 at 522.556 kb on - strand, within DZA65_RS02420 at 522.673 kb on + strand, within DZA65_RS02420 at 522.673 kb on + strand, within DZA65_RS02420 at 522.674 kb on - strand, within DZA65_RS02420 at 522.674 kb on - strand, within DZA65_RS02420 at 522.675 kb on + strand, within DZA65_RS02420 at 522.676 kb on - strand, within DZA65_RS02420 at 522.676 kb on - strand, within DZA65_RS02420 at 522.825 kb on + strand at 522.826 kb on - strand at 522.870 kb on - strand at 522.874 kb on + strand at 522.875 kb on - strand at 522.893 kb on + strand at 522.894 kb on - strand at 522.917 kb on + strand at 522.917 kb on + strand at 522.917 kb on + strand at 522.918 kb on - strand at 522.918 kb on - strand at 522.918 kb on - strand at 522.918 kb on - strand at 522.925 kb on - strand at 522.933 kb on - strand at 522.939 kb on + strand at 522.939 kb on + strand at 522.939 kb on + strand at 522.939 kb on + strand at 522.940 kb on - strand at 522.940 kb on - strand at 522.940 kb on - strand at 522.940 kb on - strand at 522.948 kb on - strand at 522.949 kb on + strand at 522.949 kb on + strand at 522.949 kb on + strand at 522.949 kb on + strand at 522.949 kb on + strand at 522.949 kb on + strand at 522.950 kb on - strand at 522.950 kb on - strand at 522.950 kb on - strand at 522.950 kb on - strand at 522.950 kb on - strand at 522.950 kb on - strand at 522.950 kb on - strand at 522.950 kb on - strand at 522.950 kb on - strand at 522.950 kb on - strand at 522.954 kb on + strand at 522.954 kb on + strand at 522.955 kb on - strand at 522.963 kb on - strand at 522.963 kb on - strand at 522.964 kb on + strand at 522.964 kb on + strand at 522.964 kb on + strand at 522.964 kb on + strand at 522.964 kb on + strand at 522.964 kb on + strand at 522.964 kb on + strand at 522.965 kb on - strand at 522.965 kb on - strand at 522.965 kb on - strand at 522.965 kb on - strand at 522.965 kb on - strand at 522.965 kb on - strand at 522.965 kb on - strand at 522.965 kb on - strand at 522.965 kb on - strand at 523.028 kb on + strand at 523.028 kb on + strand at 523.028 kb on + strand at 523.028 kb on + strand at 523.029 kb on - strand at 523.029 kb on - strand at 523.029 kb on - strand at 523.029 kb on - strand at 523.465 kb on + strand, within DZA65_RS02425 at 523.466 kb on - strand, within DZA65_RS02425 at 523.481 kb on + strand, within DZA65_RS02425 at 523.482 kb on - strand, within DZA65_RS02425 at 523.670 kb on + strand, within DZA65_RS02425 at 523.718 kb on + strand, within DZA65_RS02425 at 523.719 kb on - strand, within DZA65_RS02425 at 523.719 kb on - strand, within DZA65_RS02425
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 521,143 + DZA65_RS02415 0.46 -0.2 521,143 + DZA65_RS02415 0.46 -0.4 521,144 - DZA65_RS02415 0.46 +0.6 521,144 - DZA65_RS02415 0.46 -1.5 521,286 + DZA65_RS02415 0.54 -1.2 521,286 + DZA65_RS02415 0.54 -1.4 521,287 - DZA65_RS02415 0.54 -0.7 521,288 + DZA65_RS02415 0.54 +0.6 521,288 + DZA65_RS02415 0.54 -0.9 521,288 + DZA65_RS02415 0.54 -0.2 521,288 + DZA65_RS02415 0.54 +0.0 521,288 + DZA65_RS02415 0.54 -0.1 521,288 + DZA65_RS02415 0.54 +0.5 521,288 + DZA65_RS02415 0.54 -0.1 521,289 - DZA65_RS02415 0.54 -1.4 521,289 - DZA65_RS02415 0.54 -0.4 521,289 - DZA65_RS02415 0.54 -0.7 521,289 - DZA65_RS02415 0.54 -0.6 521,413 + DZA65_RS02415 0.62 -1.2 521,414 - DZA65_RS02415 0.62 +0.2 521,758 + DZA65_RS02415 0.82 -1.5 521,758 + DZA65_RS02415 0.82 -2.4 521,759 - DZA65_RS02415 0.82 -0.8 521,759 - DZA65_RS02415 0.82 -1.8 522,012 + -1.2 522,012 + +0.1 522,013 - -0.4 522,019 + -0.9 522,034 + -1.2 522,034 + +0.3 522,035 - -0.4 522,035 - +1.6 522,035 - -2.5 522,038 - +0.1 522,090 + -1.3 522,090 + -1.4 522,090 + -0.8 522,090 + +0.9 522,090 + +0.1 522,090 + -0.1 522,090 + -0.2 522,091 - -1.7 522,091 - -0.7 522,091 - -0.3 522,091 - -0.3 522,329 + DZA65_RS02420 0.32 +2.3 522,330 - DZA65_RS02420 0.32 +0.6 522,330 - DZA65_RS02420 0.32 +1.4 522,346 + DZA65_RS02420 0.34 -0.5 522,346 + DZA65_RS02420 0.34 +0.3 522,346 + DZA65_RS02420 0.34 +0.1 522,346 + DZA65_RS02420 0.34 +0.8 522,346 + DZA65_RS02420 0.34 +0.6 522,346 + DZA65_RS02420 0.34 -1.8 522,347 - DZA65_RS02420 0.34 +0.2 522,347 - DZA65_RS02420 0.34 -0.9 522,347 - DZA65_RS02420 0.34 -0.5 522,347 - DZA65_RS02420 0.34 -2.4 522,347 - DZA65_RS02420 0.34 -0.8 522,347 - DZA65_RS02420 0.34 +1.1 522,470 + DZA65_RS02420 0.49 -0.9 522,470 + DZA65_RS02420 0.49 -0.2 522,470 + DZA65_RS02420 0.49 +2.0 522,556 - DZA65_RS02420 0.59 +0.1 522,673 + DZA65_RS02420 0.73 +0.4 522,673 + DZA65_RS02420 0.73 -1.0 522,674 - DZA65_RS02420 0.73 -1.0 522,674 - DZA65_RS02420 0.73 -0.8 522,675 + DZA65_RS02420 0.73 -0.7 522,676 - DZA65_RS02420 0.73 -0.5 522,676 - DZA65_RS02420 0.73 -1.4 522,825 + -0.4 522,826 - +0.1 522,870 - +0.1 522,874 + +0.6 522,875 - +0.6 522,893 + +0.2 522,894 - -0.8 522,917 + -0.7 522,917 + -0.9 522,917 + -0.7 522,918 - -0.5 522,918 - -1.5 522,918 - -1.8 522,918 - -0.6 522,925 - -1.4 522,933 - -0.8 522,939 + -0.8 522,939 + +1.1 522,939 + +0.2 522,939 + -0.7 522,940 - +0.1 522,940 - -0.1 522,940 - -0.4 522,940 - -0.8 522,948 - -1.0 522,949 + -0.2 522,949 + -1.1 522,949 + +1.6 522,949 + +0.1 522,949 + +0.1 522,949 + -0.4 522,950 - +0.5 522,950 - -2.5 522,950 - -1.1 522,950 - -0.2 522,950 - +0.8 522,950 - +0.3 522,950 - -0.6 522,950 - -0.3 522,950 - -1.4 522,950 - +1.2 522,954 + -1.2 522,954 + -2.7 522,955 - -0.8 522,963 - -1.5 522,963 - -1.2 522,964 + +0.2 522,964 + -0.3 522,964 + -0.5 522,964 + +0.9 522,964 + +0.6 522,964 + +1.6 522,964 + +0.5 522,965 - -0.6 522,965 - -1.2 522,965 - -0.5 522,965 - +0.1 522,965 - -0.7 522,965 - -0.5 522,965 - -0.7 522,965 - -0.9 522,965 - -1.8 523,028 + -0.4 523,028 + -0.4 523,028 + -1.3 523,028 + -1.5 523,029 - -0.3 523,029 - -0.4 523,029 - -0.9 523,029 - +0.8 523,465 + DZA65_RS02425 0.51 -1.7 523,466 - DZA65_RS02425 0.51 +0.2 523,481 + DZA65_RS02425 0.52 -1.4 523,482 - DZA65_RS02425 0.52 +0.1 523,670 + DZA65_RS02425 0.72 -0.5 523,718 + DZA65_RS02425 0.77 +0.3 523,719 - DZA65_RS02425 0.77 -0.6 523,719 - DZA65_RS02425 0.77 +1.4
Or see this region's nucleotide sequence