Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS01995 and DZA65_RS02000 are separated by 119 nucleotides DZA65_RS02000 and DZA65_RS02005 are separated by 123 nucleotides DZA65_RS02005 and DZA65_RS02010 are separated by 292 nucleotides
DZA65_RS01995: DZA65_RS01995 - DUF29 domain-containing protein, at 438,705 to 439,136
_RS01995
DZA65_RS02000: DZA65_RS02000 - hypothetical protein, at 439,256 to 439,990
_RS02000
DZA65_RS02005: DZA65_RS02005 - GNAT family N-acetyltransferase, at 440,114 to 440,617
_RS02005
DZA65_RS02010: DZA65_RS02010 - GNAT family N-acetyltransferase, at 440,910 to 441,392
_RS02010
Position (kb) 440
441 Strain fitness (log2 ratio) -2
-1
0
1
2 at 439.139 kb on + strand at 439.139 kb on + strand at 439.140 kb on - strand at 439.140 kb on - strand at 439.140 kb on - strand at 439.140 kb on - strand at 439.144 kb on + strand at 439.145 kb on - strand at 439.206 kb on + strand at 439.211 kb on - strand at 439.221 kb on + strand at 439.239 kb on + strand at 439.240 kb on - strand at 439.382 kb on + strand, within DZA65_RS02000 at 439.486 kb on + strand, within DZA65_RS02000 at 439.486 kb on + strand, within DZA65_RS02000 at 439.522 kb on + strand, within DZA65_RS02000 at 439.523 kb on - strand, within DZA65_RS02000 at 439.525 kb on + strand, within DZA65_RS02000 at 439.526 kb on - strand, within DZA65_RS02000 at 439.534 kb on + strand, within DZA65_RS02000 at 439.534 kb on + strand, within DZA65_RS02000 at 439.535 kb on - strand, within DZA65_RS02000 at 439.554 kb on + strand, within DZA65_RS02000 at 439.555 kb on - strand, within DZA65_RS02000 at 439.555 kb on - strand, within DZA65_RS02000 at 439.555 kb on - strand, within DZA65_RS02000 at 439.559 kb on + strand, within DZA65_RS02000 at 439.559 kb on + strand, within DZA65_RS02000 at 439.560 kb on - strand, within DZA65_RS02000 at 439.560 kb on - strand, within DZA65_RS02000 at 439.560 kb on - strand, within DZA65_RS02000 at 439.897 kb on + strand, within DZA65_RS02000 at 439.909 kb on + strand, within DZA65_RS02000 at 439.917 kb on + strand at 439.918 kb on - strand at 439.923 kb on - strand at 439.923 kb on - strand at 439.976 kb on + strand at 439.977 kb on - strand at 439.992 kb on + strand at 439.993 kb on - strand at 439.993 kb on - strand at 439.997 kb on + strand at 439.997 kb on + strand at 439.997 kb on + strand at 439.997 kb on + strand at 439.997 kb on + strand at 439.997 kb on + strand at 439.998 kb on - strand at 439.998 kb on - strand at 439.998 kb on - strand at 440.020 kb on + strand at 440.020 kb on + strand at 440.029 kb on + strand at 440.115 kb on + strand at 440.115 kb on + strand at 440.115 kb on + strand at 440.115 kb on + strand at 440.115 kb on + strand at 440.115 kb on + strand at 440.115 kb on + strand at 440.115 kb on + strand at 440.115 kb on + strand at 440.116 kb on - strand at 440.117 kb on + strand at 440.117 kb on + strand at 440.117 kb on + strand at 440.117 kb on + strand at 440.179 kb on + strand, within DZA65_RS02005 at 440.180 kb on - strand, within DZA65_RS02005 at 440.202 kb on + strand, within DZA65_RS02005 at 440.245 kb on - strand, within DZA65_RS02005 at 440.245 kb on - strand, within DZA65_RS02005 at 440.433 kb on + strand, within DZA65_RS02005 at 440.433 kb on + strand, within DZA65_RS02005 at 440.434 kb on - strand, within DZA65_RS02005 at 440.454 kb on + strand, within DZA65_RS02005 at 440.454 kb on + strand, within DZA65_RS02005 at 440.454 kb on + strand, within DZA65_RS02005 at 440.455 kb on - strand at 440.455 kb on - strand, within DZA65_RS02005 at 440.455 kb on - strand, within DZA65_RS02005 at 440.455 kb on - strand, within DZA65_RS02005 at 440.455 kb on - strand, within DZA65_RS02005 at 440.455 kb on - strand, within DZA65_RS02005 at 440.455 kb on - strand, within DZA65_RS02005 at 440.495 kb on - strand, within DZA65_RS02005 at 440.495 kb on - strand, within DZA65_RS02005 at 440.495 kb on - strand, within DZA65_RS02005 at 440.496 kb on + strand, within DZA65_RS02005 at 440.496 kb on + strand, within DZA65_RS02005 at 440.496 kb on + strand, within DZA65_RS02005 at 440.496 kb on + strand, within DZA65_RS02005 at 440.496 kb on + strand, within DZA65_RS02005 at 440.496 kb on + strand, within DZA65_RS02005 at 440.497 kb on - strand, within DZA65_RS02005 at 440.497 kb on - strand, within DZA65_RS02005 at 440.497 kb on - strand, within DZA65_RS02005 at 440.599 kb on + strand at 440.600 kb on - strand at 440.600 kb on - strand at 440.688 kb on + strand at 440.688 kb on + strand at 440.688 kb on + strand at 440.688 kb on + strand at 440.688 kb on + strand at 440.689 kb on - strand at 440.689 kb on - strand at 440.689 kb on - strand at 440.689 kb on - strand at 440.689 kb on - strand at 440.689 kb on - strand at 440.692 kb on + strand at 440.692 kb on + strand at 440.692 kb on + strand at 440.692 kb on + strand at 440.693 kb on - strand at 440.693 kb on - strand at 440.693 kb on - strand at 440.693 kb on - strand at 440.693 kb on - strand at 440.693 kb on - strand at 440.693 kb on - strand at 440.703 kb on - strand at 440.704 kb on + strand at 440.704 kb on + strand at 440.704 kb on + strand at 440.704 kb on + strand at 440.704 kb on + strand at 440.705 kb on - strand at 440.705 kb on - strand at 440.705 kb on - strand at 440.705 kb on - strand at 440.705 kb on - strand at 440.705 kb on - strand at 440.705 kb on - strand at 440.705 kb on - strand at 440.705 kb on - strand at 440.705 kb on - strand at 440.705 kb on - strand at 440.719 kb on - strand at 440.720 kb on + strand at 440.720 kb on + strand at 440.720 kb on + strand at 440.720 kb on + strand at 440.720 kb on + strand at 440.720 kb on + strand at 440.720 kb on + strand at 440.720 kb on + strand at 440.720 kb on + strand at 440.720 kb on + strand at 440.721 kb on - strand at 440.721 kb on - strand at 440.721 kb on - strand at 440.721 kb on - strand at 440.721 kb on - strand at 440.721 kb on - strand at 440.721 kb on - strand at 440.721 kb on - strand at 440.721 kb on - strand at 440.721 kb on - strand at 440.721 kb on - strand at 440.721 kb on - strand at 440.721 kb on - strand at 440.721 kb on - strand at 440.721 kb on - strand at 440.721 kb on - strand at 440.721 kb on - strand at 440.721 kb on - strand at 440.721 kb on - strand at 440.721 kb on - strand at 440.724 kb on + strand at 440.724 kb on + strand at 440.751 kb on + strand at 440.751 kb on + strand at 440.751 kb on + strand at 440.751 kb on + strand at 440.752 kb on - strand at 440.752 kb on - strand at 440.752 kb on - strand at 440.752 kb on - strand at 440.753 kb on + strand at 440.753 kb on + strand at 440.753 kb on + strand at 440.753 kb on + strand at 440.753 kb on + strand at 440.753 kb on + strand at 440.753 kb on + strand at 440.754 kb on - strand at 440.754 kb on - strand at 440.754 kb on - strand at 440.754 kb on - strand at 440.758 kb on + strand at 440.759 kb on - strand at 440.759 kb on - strand at 440.762 kb on + strand at 440.762 kb on + strand at 440.762 kb on + strand at 440.763 kb on - strand at 440.763 kb on - strand at 440.763 kb on - strand at 440.810 kb on - strand at 440.825 kb on - strand at 440.867 kb on + strand at 440.867 kb on + strand at 440.867 kb on + strand at 440.867 kb on + strand at 440.868 kb on - strand at 440.868 kb on - strand at 440.895 kb on - strand at 440.909 kb on + strand at 440.909 kb on + strand at 440.909 kb on + strand at 440.909 kb on + strand at 440.910 kb on - strand at 440.910 kb on - strand at 440.910 kb on - strand at 440.918 kb on + strand at 440.918 kb on + strand at 440.918 kb on + strand at 440.918 kb on + strand at 440.918 kb on + strand at 440.918 kb on + strand at 440.918 kb on + strand at 440.918 kb on + strand at 440.918 kb on + strand at 440.918 kb on + strand at 440.918 kb on + strand at 440.918 kb on + strand at 440.918 kb on + strand at 440.918 kb on + strand at 440.918 kb on + strand at 440.918 kb on + strand at 440.919 kb on - strand at 440.919 kb on - strand at 440.919 kb on - strand at 440.919 kb on - strand at 440.919 kb on - strand at 440.919 kb on - strand at 440.919 kb on - strand at 440.919 kb on - strand at 440.919 kb on - strand at 440.919 kb on - strand at 440.919 kb on - strand at 440.919 kb on - strand at 440.919 kb on - strand at 440.919 kb on - strand at 440.919 kb on - strand at 441.005 kb on + strand, within DZA65_RS02010 at 441.005 kb on + strand, within DZA65_RS02010 at 441.015 kb on - strand, within DZA65_RS02010 at 441.015 kb on - strand, within DZA65_RS02010 at 441.218 kb on + strand, within DZA65_RS02010 at 441.218 kb on + strand, within DZA65_RS02010 at 441.219 kb on - strand, within DZA65_RS02010 at 441.306 kb on + strand, within DZA65_RS02010 at 441.307 kb on - strand, within DZA65_RS02010 at 441.349 kb on - strand at 441.350 kb on + strand at 441.351 kb on - strand at 441.351 kb on - strand at 441.351 kb on - strand at 441.351 kb on - strand at 441.415 kb on + strand at 441.416 kb on - strand at 441.438 kb on + strand at 441.438 kb on + strand at 441.438 kb on + strand at 441.439 kb on - strand at 441.472 kb on + strand at 441.514 kb on + strand at 441.515 kb on - strand at 441.525 kb on + strand at 441.525 kb on + strand at 441.525 kb on + strand at 441.526 kb on - strand at 441.535 kb on + strand at 441.538 kb on + strand at 441.539 kb on - strand at 441.543 kb on + strand at 441.543 kb on + strand at 441.544 kb on - strand at 441.544 kb on - strand at 441.545 kb on + strand at 441.575 kb on + strand at 441.575 kb on + strand at 441.576 kb on - strand at 441.576 kb on - strand at 441.576 kb on - strand at 441.576 kb on - strand at 441.580 kb on - strand at 441.608 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 439,139 + -0.8 439,139 + -1.3 439,140 - -0.9 439,140 - -0.9 439,140 - -1.8 439,140 - -0.7 439,144 + -0.9 439,145 - -0.7 439,206 + -0.3 439,211 - -0.7 439,221 + -0.2 439,239 + +0.4 439,240 - +0.3 439,382 + DZA65_RS02000 0.17 +0.8 439,486 + DZA65_RS02000 0.31 -0.1 439,486 + DZA65_RS02000 0.31 +0.6 439,522 + DZA65_RS02000 0.36 -1.7 439,523 - DZA65_RS02000 0.36 -0.4 439,525 + DZA65_RS02000 0.37 +0.9 439,526 - DZA65_RS02000 0.37 -0.3 439,534 + DZA65_RS02000 0.38 +0.2 439,534 + DZA65_RS02000 0.38 -0.3 439,535 - DZA65_RS02000 0.38 -0.3 439,554 + DZA65_RS02000 0.41 +0.3 439,555 - DZA65_RS02000 0.41 -1.3 439,555 - DZA65_RS02000 0.41 +0.9 439,555 - DZA65_RS02000 0.41 -1.7 439,559 + DZA65_RS02000 0.41 -0.3 439,559 + DZA65_RS02000 0.41 -2.1 439,560 - DZA65_RS02000 0.41 -0.1 439,560 - DZA65_RS02000 0.41 -1.1 439,560 - DZA65_RS02000 0.41 +1.7 439,897 + DZA65_RS02000 0.87 +2.4 439,909 + DZA65_RS02000 0.89 +0.1 439,917 + -0.6 439,918 - +0.9 439,923 - -0.7 439,923 - -1.3 439,976 + +0.2 439,977 - -1.3 439,992 + +0.2 439,993 - +0.1 439,993 - -0.1 439,997 + -0.6 439,997 + -2.6 439,997 + +0.3 439,997 + -0.7 439,997 + -0.2 439,997 + -1.8 439,998 - -0.1 439,998 - +0.1 439,998 - -0.3 440,020 + -1.5 440,020 + +0.7 440,029 + -1.7 440,115 + -1.3 440,115 + -0.9 440,115 + +0.7 440,115 + -0.4 440,115 + +0.1 440,115 + -0.8 440,115 + -0.5 440,115 + -1.2 440,115 + -0.9 440,116 - -1.5 440,117 + +0.2 440,117 + +0.1 440,117 + -0.5 440,117 + -0.9 440,179 + DZA65_RS02005 0.13 +0.3 440,180 - DZA65_RS02005 0.13 -1.1 440,202 + DZA65_RS02005 0.17 +1.2 440,245 - DZA65_RS02005 0.26 +0.1 440,245 - DZA65_RS02005 0.26 -1.5 440,433 + DZA65_RS02005 0.63 +2.3 440,433 + DZA65_RS02005 0.63 -1.5 440,434 - DZA65_RS02005 0.63 +0.1 440,454 + DZA65_RS02005 0.67 -0.9 440,454 + DZA65_RS02005 0.67 -0.7 440,454 + DZA65_RS02005 0.67 -1.3 440,455 - +0.1 440,455 - DZA65_RS02005 0.68 +0.4 440,455 - DZA65_RS02005 0.68 -1.1 440,455 - DZA65_RS02005 0.68 +0.8 440,455 - DZA65_RS02005 0.68 +0.8 440,455 - DZA65_RS02005 0.68 +1.2 440,455 - DZA65_RS02005 0.68 -0.1 440,495 - DZA65_RS02005 0.76 -1.7 440,495 - DZA65_RS02005 0.76 -0.5 440,495 - DZA65_RS02005 0.76 -0.5 440,496 + DZA65_RS02005 0.76 +1.1 440,496 + DZA65_RS02005 0.76 -0.8 440,496 + DZA65_RS02005 0.76 +0.5 440,496 + DZA65_RS02005 0.76 -0.6 440,496 + DZA65_RS02005 0.76 -0.5 440,496 + DZA65_RS02005 0.76 -0.3 440,497 - DZA65_RS02005 0.76 -0.0 440,497 - DZA65_RS02005 0.76 -0.0 440,497 - DZA65_RS02005 0.76 +0.3 440,599 + +1.7 440,600 - -2.6 440,600 - -0.1 440,688 + -0.4 440,688 + -0.8 440,688 + +0.7 440,688 + +0.3 440,688 + -0.1 440,689 - +0.1 440,689 - -0.7 440,689 - -0.7 440,689 - -1.3 440,689 - +0.0 440,689 - -1.5 440,692 + -0.2 440,692 + -1.1 440,692 + -0.7 440,692 + +0.5 440,693 - -1.3 440,693 - -0.5 440,693 - -0.1 440,693 - -0.8 440,693 - -0.6 440,693 - -0.7 440,693 - -0.5 440,703 - -0.2 440,704 + -1.1 440,704 + -0.2 440,704 + +0.3 440,704 + -1.5 440,704 + +0.1 440,705 - -1.8 440,705 - +0.4 440,705 - -0.0 440,705 - -0.0 440,705 - -0.9 440,705 - +0.1 440,705 - +0.9 440,705 - +2.3 440,705 - +1.1 440,705 - -0.8 440,705 - -1.8 440,719 - +0.7 440,720 + -0.3 440,720 + -1.7 440,720 + -2.0 440,720 + +1.0 440,720 + -0.8 440,720 + -2.3 440,720 + -0.1 440,720 + +0.1 440,720 + +1.3 440,720 + -0.6 440,721 - +2.3 440,721 - -0.3 440,721 - +0.1 440,721 - -1.1 440,721 - -0.3 440,721 - -1.6 440,721 - -0.3 440,721 - -0.1 440,721 - -2.0 440,721 - -0.6 440,721 - +0.1 440,721 - -0.6 440,721 - -2.2 440,721 - +0.1 440,721 - -2.3 440,721 - +0.4 440,721 - +0.7 440,721 - -0.0 440,721 - -0.9 440,721 - -2.2 440,724 + -0.0 440,724 + -0.1 440,751 + -1.2 440,751 + +0.1 440,751 + +0.1 440,751 + -0.5 440,752 - -0.9 440,752 - -0.3 440,752 - -1.1 440,752 - +1.3 440,753 + -0.6 440,753 + +2.3 440,753 + -0.0 440,753 + -0.7 440,753 + -0.6 440,753 + +1.7 440,753 + +1.0 440,754 - +0.9 440,754 - -1.3 440,754 - +1.0 440,754 - -0.8 440,758 + -1.5 440,759 - +1.7 440,759 - +1.7 440,762 + -1.5 440,762 + -0.3 440,762 + -0.3 440,763 - -0.7 440,763 - -0.4 440,763 - +0.2 440,810 - -0.2 440,825 - -0.7 440,867 + -1.7 440,867 + +0.1 440,867 + -0.5 440,867 + +0.1 440,868 - +0.3 440,868 - -0.1 440,895 - +0.1 440,909 + +0.1 440,909 + -0.5 440,909 + -1.1 440,909 + -0.7 440,910 - -0.1 440,910 - -0.9 440,910 - -0.7 440,918 + -0.7 440,918 + +0.9 440,918 + -0.1 440,918 + -1.0 440,918 + -1.5 440,918 + +0.3 440,918 + -0.1 440,918 + -0.9 440,918 + -0.4 440,918 + -0.3 440,918 + -0.2 440,918 + -1.9 440,918 + -0.2 440,918 + +0.8 440,918 + +1.1 440,918 + -0.1 440,919 - -1.0 440,919 - +0.7 440,919 - -1.1 440,919 - -0.1 440,919 - +0.3 440,919 - -1.1 440,919 - -0.5 440,919 - -0.2 440,919 - +0.5 440,919 - +0.9 440,919 - +0.3 440,919 - -2.0 440,919 - +2.1 440,919 - -0.5 440,919 - +0.1 441,005 + DZA65_RS02010 0.20 -0.3 441,005 + DZA65_RS02010 0.20 +0.3 441,015 - DZA65_RS02010 0.22 +0.1 441,015 - DZA65_RS02010 0.22 -0.2 441,218 + DZA65_RS02010 0.64 +0.1 441,218 + DZA65_RS02010 0.64 -0.7 441,219 - DZA65_RS02010 0.64 +0.3 441,306 + DZA65_RS02010 0.82 -1.0 441,307 - DZA65_RS02010 0.82 -0.3 441,349 - -1.0 441,350 + +0.1 441,351 - -0.7 441,351 - -0.3 441,351 - +1.0 441,351 - -0.1 441,415 + -1.2 441,416 - +1.3 441,438 + -2.2 441,438 + -0.1 441,438 + -0.1 441,439 - -1.0 441,472 + -1.0 441,514 + -0.7 441,515 - -0.8 441,525 + -0.4 441,525 + -0.9 441,525 + -0.1 441,526 - -0.7 441,535 + -1.3 441,538 + -0.3 441,539 - -0.7 441,543 + -1.7 441,543 + -2.1 441,544 - -1.5 441,544 - -0.5 441,545 + -0.7 441,575 + +0.2 441,575 + -1.1 441,576 - +0.3 441,576 - -0.2 441,576 - -1.4 441,576 - -2.0 441,580 - -0.7 441,608 + +0.6
Or see this region's nucleotide sequence