Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS01755 and DZA65_RS01760 are separated by 87 nucleotides DZA65_RS01760 and DZA65_RS01765 are separated by 59 nucleotides
DZA65_RS01755: DZA65_RS01755 - 1-acylglycerol-3-phosphate O-acyltransferase, at 382,394 to 383,131
_RS01755
DZA65_RS01760: DZA65_RS01760 - cell division protein FtsP, at 383,219 to 384,637
_RS01760
DZA65_RS01765: DZA65_RS01765 - 2,5-didehydrogluconate reductase DkgA, at 384,697 to 385,542
_RS01765
Position (kb) 383
384
385 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 382.290 kb on + strand at 382.290 kb on + strand at 382.290 kb on + strand at 382.290 kb on + strand at 382.290 kb on + strand at 382.291 kb on - strand at 382.291 kb on - strand at 382.291 kb on - strand at 382.345 kb on + strand at 382.361 kb on + strand at 382.361 kb on + strand at 382.361 kb on + strand at 382.361 kb on + strand at 382.361 kb on + strand at 382.361 kb on + strand at 382.361 kb on + strand at 382.364 kb on + strand at 382.364 kb on + strand at 383.129 kb on + strand at 383.129 kb on + strand at 383.130 kb on - strand at 383.130 kb on - strand at 383.130 kb on - strand at 383.190 kb on - strand at 383.190 kb on - strand at 383.218 kb on + strand at 383.218 kb on + strand at 383.218 kb on + strand at 383.218 kb on + strand at 383.218 kb on + strand at 383.218 kb on + strand at 383.219 kb on - strand at 383.219 kb on - strand at 383.219 kb on - strand at 383.219 kb on - strand at 383.490 kb on - strand, within DZA65_RS01760 at 383.490 kb on - strand, within DZA65_RS01760 at 383.572 kb on + strand, within DZA65_RS01760 at 383.588 kb on - strand, within DZA65_RS01760 at 383.639 kb on + strand, within DZA65_RS01760 at 383.639 kb on + strand, within DZA65_RS01760 at 383.639 kb on + strand, within DZA65_RS01760 at 383.640 kb on - strand, within DZA65_RS01760 at 383.640 kb on - strand, within DZA65_RS01760 at 383.650 kb on + strand, within DZA65_RS01760 at 383.678 kb on + strand, within DZA65_RS01760 at 383.678 kb on + strand, within DZA65_RS01760 at 383.678 kb on + strand, within DZA65_RS01760 at 383.678 kb on + strand, within DZA65_RS01760 at 383.679 kb on - strand, within DZA65_RS01760 at 383.679 kb on - strand, within DZA65_RS01760 at 383.679 kb on - strand, within DZA65_RS01760 at 383.679 kb on - strand, within DZA65_RS01760 at 383.679 kb on - strand, within DZA65_RS01760 at 383.680 kb on + strand, within DZA65_RS01760 at 383.680 kb on + strand, within DZA65_RS01760 at 383.681 kb on - strand, within DZA65_RS01760 at 383.722 kb on + strand, within DZA65_RS01760 at 383.722 kb on + strand, within DZA65_RS01760 at 383.722 kb on + strand, within DZA65_RS01760 at 383.723 kb on - strand, within DZA65_RS01760 at 383.773 kb on + strand, within DZA65_RS01760 at 383.813 kb on + strand, within DZA65_RS01760 at 383.813 kb on + strand, within DZA65_RS01760 at 383.813 kb on + strand, within DZA65_RS01760 at 383.813 kb on + strand, within DZA65_RS01760 at 383.814 kb on - strand, within DZA65_RS01760 at 383.814 kb on - strand, within DZA65_RS01760 at 383.814 kb on - strand, within DZA65_RS01760 at 383.848 kb on + strand, within DZA65_RS01760 at 383.848 kb on + strand, within DZA65_RS01760 at 383.848 kb on + strand, within DZA65_RS01760 at 383.848 kb on + strand, within DZA65_RS01760 at 383.848 kb on + strand, within DZA65_RS01760 at 383.849 kb on - strand, within DZA65_RS01760 at 383.849 kb on - strand, within DZA65_RS01760 at 383.849 kb on - strand, within DZA65_RS01760 at 383.849 kb on - strand, within DZA65_RS01760 at 383.849 kb on - strand, within DZA65_RS01760 at 383.879 kb on + strand, within DZA65_RS01760 at 383.879 kb on + strand, within DZA65_RS01760 at 383.879 kb on + strand, within DZA65_RS01760 at 383.879 kb on + strand, within DZA65_RS01760 at 383.879 kb on + strand, within DZA65_RS01760 at 383.880 kb on - strand, within DZA65_RS01760 at 383.880 kb on - strand, within DZA65_RS01760 at 383.880 kb on - strand, within DZA65_RS01760 at 383.880 kb on - strand, within DZA65_RS01760 at 383.880 kb on - strand, within DZA65_RS01760 at 383.880 kb on - strand, within DZA65_RS01760 at 383.942 kb on + strand, within DZA65_RS01760 at 383.942 kb on + strand, within DZA65_RS01760 at 383.943 kb on - strand, within DZA65_RS01760 at 383.943 kb on - strand at 383.943 kb on - strand, within DZA65_RS01760 at 383.943 kb on - strand, within DZA65_RS01760 at 383.943 kb on - strand, within DZA65_RS01760 at 383.943 kb on - strand, within DZA65_RS01760 at 384.070 kb on + strand, within DZA65_RS01760 at 384.070 kb on + strand, within DZA65_RS01760 at 384.082 kb on + strand, within DZA65_RS01760 at 384.154 kb on + strand, within DZA65_RS01760 at 384.154 kb on + strand, within DZA65_RS01760 at 384.155 kb on - strand, within DZA65_RS01760 at 384.155 kb on - strand, within DZA65_RS01760 at 384.157 kb on + strand, within DZA65_RS01760 at 384.158 kb on - strand, within DZA65_RS01760 at 384.158 kb on - strand, within DZA65_RS01760 at 384.158 kb on - strand, within DZA65_RS01760 at 384.158 kb on - strand, within DZA65_RS01760 at 384.180 kb on + strand, within DZA65_RS01760 at 384.181 kb on - strand, within DZA65_RS01760 at 384.181 kb on - strand, within DZA65_RS01760 at 384.220 kb on + strand, within DZA65_RS01760 at 384.220 kb on + strand, within DZA65_RS01760 at 384.220 kb on + strand, within DZA65_RS01760 at 384.220 kb on + strand, within DZA65_RS01760 at 384.221 kb on - strand, within DZA65_RS01760 at 384.250 kb on + strand, within DZA65_RS01760 at 384.250 kb on + strand, within DZA65_RS01760 at 384.250 kb on + strand, within DZA65_RS01760 at 384.250 kb on + strand, within DZA65_RS01760 at 384.251 kb on - strand, within DZA65_RS01760 at 384.348 kb on + strand, within DZA65_RS01760 at 384.348 kb on + strand, within DZA65_RS01760 at 384.348 kb on + strand, within DZA65_RS01760 at 384.348 kb on + strand, within DZA65_RS01760 at 384.349 kb on - strand, within DZA65_RS01760 at 384.349 kb on - strand, within DZA65_RS01760 at 384.349 kb on - strand, within DZA65_RS01760 at 384.349 kb on - strand, within DZA65_RS01760 at 384.349 kb on - strand, within DZA65_RS01760 at 384.349 kb on - strand, within DZA65_RS01760 at 384.349 kb on - strand, within DZA65_RS01760 at 384.349 kb on - strand, within DZA65_RS01760 at 384.369 kb on - strand, within DZA65_RS01760 at 384.492 kb on + strand, within DZA65_RS01760 at 384.493 kb on - strand, within DZA65_RS01760 at 384.493 kb on - strand at 384.524 kb on + strand at 384.524 kb on + strand at 384.524 kb on + strand at 384.524 kb on + strand at 384.524 kb on + strand at 384.525 kb on - strand at 384.525 kb on - strand at 384.525 kb on - strand at 384.525 kb on - strand at 384.525 kb on - strand at 384.564 kb on - strand at 384.564 kb on - strand at 384.564 kb on - strand at 384.564 kb on - strand at 384.566 kb on + strand at 384.566 kb on + strand at 384.567 kb on - strand at 384.567 kb on - strand at 384.768 kb on + strand at 384.781 kb on + strand at 384.781 kb on + strand at 384.918 kb on - strand, within DZA65_RS01765 at 384.956 kb on - strand, within DZA65_RS01765 at 385.071 kb on + strand, within DZA65_RS01765 at 385.071 kb on + strand, within DZA65_RS01765 at 385.165 kb on - strand, within DZA65_RS01765 at 385.165 kb on - strand, within DZA65_RS01765 at 385.196 kb on + strand, within DZA65_RS01765 at 385.196 kb on + strand, within DZA65_RS01765 at 385.196 kb on + strand, within DZA65_RS01765 at 385.196 kb on + strand, within DZA65_RS01765 at 385.196 kb on + strand, within DZA65_RS01765 at 385.196 kb on + strand, within DZA65_RS01765 at 385.196 kb on + strand, within DZA65_RS01765 at 385.196 kb on + strand, within DZA65_RS01765 at 385.196 kb on + strand, within DZA65_RS01765 at 385.196 kb on + strand, within DZA65_RS01765 at 385.196 kb on + strand, within DZA65_RS01765 at 385.196 kb on + strand, within DZA65_RS01765 at 385.196 kb on + strand, within DZA65_RS01765 at 385.196 kb on + strand, within DZA65_RS01765 at 385.197 kb on - strand, within DZA65_RS01765 at 385.197 kb on - strand, within DZA65_RS01765 at 385.197 kb on - strand, within DZA65_RS01765 at 385.197 kb on - strand, within DZA65_RS01765 at 385.197 kb on - strand, within DZA65_RS01765 at 385.197 kb on - strand, within DZA65_RS01765 at 385.197 kb on - strand, within DZA65_RS01765 at 385.197 kb on - strand, within DZA65_RS01765 at 385.232 kb on + strand, within DZA65_RS01765 at 385.232 kb on + strand, within DZA65_RS01765 at 385.233 kb on - strand, within DZA65_RS01765 at 385.233 kb on - strand, within DZA65_RS01765 at 385.233 kb on - strand, within DZA65_RS01765 at 385.233 kb on - strand, within DZA65_RS01765 at 385.245 kb on - strand, within DZA65_RS01765 at 385.255 kb on + strand, within DZA65_RS01765 at 385.255 kb on + strand, within DZA65_RS01765 at 385.255 kb on + strand, within DZA65_RS01765 at 385.255 kb on + strand, within DZA65_RS01765 at 385.255 kb on + strand, within DZA65_RS01765 at 385.255 kb on + strand, within DZA65_RS01765 at 385.255 kb on + strand, within DZA65_RS01765 at 385.255 kb on + strand, within DZA65_RS01765 at 385.256 kb on - strand, within DZA65_RS01765 at 385.256 kb on - strand, within DZA65_RS01765 at 385.256 kb on - strand, within DZA65_RS01765 at 385.256 kb on - strand, within DZA65_RS01765 at 385.332 kb on + strand, within DZA65_RS01765 at 385.333 kb on - strand, within DZA65_RS01765 at 385.503 kb on + strand at 385.503 kb on + strand at 385.542 kb on + strand at 385.543 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 382,290 + -1.1 382,290 + +0.9 382,290 + -0.1 382,290 + -0.5 382,290 + -0.4 382,291 - -0.5 382,291 - -0.3 382,291 - +0.1 382,345 + -1.7 382,361 + -0.6 382,361 + -0.9 382,361 + -0.4 382,361 + +0.5 382,361 + -0.0 382,361 + +0.7 382,361 + -1.5 382,364 + -1.3 382,364 + +0.1 383,129 + -1.1 383,129 + +0.3 383,130 - -0.3 383,130 - +0.5 383,130 - -0.1 383,190 - +0.4 383,190 - -0.6 383,218 + -1.1 383,218 + +0.3 383,218 + -0.9 383,218 + +0.7 383,218 + +2.5 383,218 + +0.1 383,219 - +0.5 383,219 - +0.9 383,219 - -1.3 383,219 - -0.5 383,490 - DZA65_RS01760 0.19 -1.9 383,490 - DZA65_RS01760 0.19 -0.6 383,572 + DZA65_RS01760 0.25 -0.9 383,588 - DZA65_RS01760 0.26 -0.9 383,639 + DZA65_RS01760 0.30 -1.8 383,639 + DZA65_RS01760 0.30 -1.5 383,639 + DZA65_RS01760 0.30 -0.6 383,640 - DZA65_RS01760 0.30 -0.6 383,640 - DZA65_RS01760 0.30 -0.5 383,650 + DZA65_RS01760 0.30 +1.7 383,678 + DZA65_RS01760 0.32 -1.9 383,678 + DZA65_RS01760 0.32 +0.1 383,678 + DZA65_RS01760 0.32 +1.0 383,678 + DZA65_RS01760 0.32 -1.6 383,679 - DZA65_RS01760 0.32 -0.0 383,679 - DZA65_RS01760 0.32 -1.3 383,679 - DZA65_RS01760 0.32 -0.5 383,679 - DZA65_RS01760 0.32 -0.9 383,679 - DZA65_RS01760 0.32 +0.1 383,680 + DZA65_RS01760 0.32 -1.1 383,680 + DZA65_RS01760 0.32 -2.6 383,681 - DZA65_RS01760 0.33 +0.7 383,722 + DZA65_RS01760 0.35 -0.1 383,722 + DZA65_RS01760 0.35 -0.4 383,722 + DZA65_RS01760 0.35 -0.9 383,723 - DZA65_RS01760 0.36 -1.9 383,773 + DZA65_RS01760 0.39 -0.5 383,813 + DZA65_RS01760 0.42 +0.4 383,813 + DZA65_RS01760 0.42 -0.5 383,813 + DZA65_RS01760 0.42 -1.8 383,813 + DZA65_RS01760 0.42 -0.5 383,814 - DZA65_RS01760 0.42 -1.5 383,814 - DZA65_RS01760 0.42 +0.1 383,814 - DZA65_RS01760 0.42 -2.3 383,848 + DZA65_RS01760 0.44 -2.6 383,848 + DZA65_RS01760 0.44 -1.4 383,848 + DZA65_RS01760 0.44 +0.1 383,848 + DZA65_RS01760 0.44 -0.9 383,848 + DZA65_RS01760 0.44 -1.2 383,849 - DZA65_RS01760 0.44 +0.9 383,849 - DZA65_RS01760 0.44 +0.7 383,849 - DZA65_RS01760 0.44 -0.2 383,849 - DZA65_RS01760 0.44 -1.3 383,849 - DZA65_RS01760 0.44 +0.1 383,879 + DZA65_RS01760 0.47 -0.6 383,879 + DZA65_RS01760 0.47 -0.1 383,879 + DZA65_RS01760 0.47 +0.9 383,879 + DZA65_RS01760 0.47 -1.1 383,879 + DZA65_RS01760 0.47 -1.2 383,880 - DZA65_RS01760 0.47 -0.6 383,880 - DZA65_RS01760 0.47 -0.9 383,880 - DZA65_RS01760 0.47 -0.0 383,880 - DZA65_RS01760 0.47 -0.8 383,880 - DZA65_RS01760 0.47 -0.2 383,880 - DZA65_RS01760 0.47 -0.9 383,942 + DZA65_RS01760 0.51 -0.3 383,942 + DZA65_RS01760 0.51 +0.9 383,943 - DZA65_RS01760 0.51 -1.1 383,943 - -0.6 383,943 - DZA65_RS01760 0.51 -0.6 383,943 - DZA65_RS01760 0.51 -1.9 383,943 - DZA65_RS01760 0.51 -0.5 383,943 - DZA65_RS01760 0.51 +0.7 384,070 + DZA65_RS01760 0.60 +0.4 384,070 + DZA65_RS01760 0.60 -0.6 384,082 + DZA65_RS01760 0.61 +0.7 384,154 + DZA65_RS01760 0.66 -2.3 384,154 + DZA65_RS01760 0.66 +0.5 384,155 - DZA65_RS01760 0.66 -1.4 384,155 - DZA65_RS01760 0.66 +0.1 384,157 + DZA65_RS01760 0.66 -0.4 384,158 - DZA65_RS01760 0.66 +0.7 384,158 - DZA65_RS01760 0.66 -1.0 384,158 - DZA65_RS01760 0.66 +0.1 384,158 - DZA65_RS01760 0.66 +0.1 384,180 + DZA65_RS01760 0.68 -0.3 384,181 - DZA65_RS01760 0.68 -0.2 384,181 - DZA65_RS01760 0.68 +0.1 384,220 + DZA65_RS01760 0.71 -2.0 384,220 + DZA65_RS01760 0.71 -1.5 384,220 + DZA65_RS01760 0.71 +0.7 384,220 + DZA65_RS01760 0.71 -0.1 384,221 - DZA65_RS01760 0.71 +0.1 384,250 + DZA65_RS01760 0.73 +0.4 384,250 + DZA65_RS01760 0.73 +0.9 384,250 + DZA65_RS01760 0.73 -1.6 384,250 + DZA65_RS01760 0.73 -0.1 384,251 - DZA65_RS01760 0.73 -1.3 384,348 + DZA65_RS01760 0.80 -0.3 384,348 + DZA65_RS01760 0.80 -0.4 384,348 + DZA65_RS01760 0.80 +2.0 384,348 + DZA65_RS01760 0.80 +0.3 384,349 - DZA65_RS01760 0.80 -0.9 384,349 - DZA65_RS01760 0.80 -0.9 384,349 - DZA65_RS01760 0.80 -1.2 384,349 - DZA65_RS01760 0.80 +0.1 384,349 - DZA65_RS01760 0.80 -2.8 384,349 - DZA65_RS01760 0.80 -2.2 384,349 - DZA65_RS01760 0.80 -1.2 384,349 - DZA65_RS01760 0.80 -0.1 384,369 - DZA65_RS01760 0.81 -1.4 384,492 + DZA65_RS01760 0.90 -0.9 384,493 - DZA65_RS01760 0.90 +0.5 384,493 - +2.7 384,524 + +0.3 384,524 + -1.6 384,524 + -0.8 384,524 + -1.5 384,524 + -0.3 384,525 - +0.5 384,525 - -1.5 384,525 - -0.0 384,525 - -1.1 384,525 - -0.1 384,564 - +0.4 384,564 - -1.6 384,564 - -1.8 384,564 - +0.1 384,566 + +0.1 384,566 + -1.2 384,567 - -0.9 384,567 - -0.3 384,768 + -1.5 384,781 + -2.5 384,781 + +0.2 384,918 - DZA65_RS01765 0.26 +0.1 384,956 - DZA65_RS01765 0.31 -1.2 385,071 + DZA65_RS01765 0.44 +0.7 385,071 + DZA65_RS01765 0.44 -1.1 385,165 - DZA65_RS01765 0.55 +0.1 385,165 - DZA65_RS01765 0.55 -0.9 385,196 + DZA65_RS01765 0.59 +0.2 385,196 + DZA65_RS01765 0.59 +0.1 385,196 + DZA65_RS01765 0.59 -0.9 385,196 + DZA65_RS01765 0.59 -0.3 385,196 + DZA65_RS01765 0.59 +1.1 385,196 + DZA65_RS01765 0.59 +1.7 385,196 + DZA65_RS01765 0.59 -0.3 385,196 + DZA65_RS01765 0.59 -2.6 385,196 + DZA65_RS01765 0.59 +1.2 385,196 + DZA65_RS01765 0.59 -1.3 385,196 + DZA65_RS01765 0.59 +0.1 385,196 + DZA65_RS01765 0.59 -0.8 385,196 + DZA65_RS01765 0.59 +0.5 385,196 + DZA65_RS01765 0.59 -0.1 385,197 - DZA65_RS01765 0.59 -1.5 385,197 - DZA65_RS01765 0.59 -0.3 385,197 - DZA65_RS01765 0.59 -2.6 385,197 - DZA65_RS01765 0.59 +0.0 385,197 - DZA65_RS01765 0.59 +0.1 385,197 - DZA65_RS01765 0.59 -0.3 385,197 - DZA65_RS01765 0.59 -0.2 385,197 - DZA65_RS01765 0.59 +0.7 385,232 + DZA65_RS01765 0.63 -0.3 385,232 + DZA65_RS01765 0.63 -0.7 385,233 - DZA65_RS01765 0.63 +0.1 385,233 - DZA65_RS01765 0.63 -0.5 385,233 - DZA65_RS01765 0.63 -1.1 385,233 - DZA65_RS01765 0.63 -1.0 385,245 - DZA65_RS01765 0.65 -0.3 385,255 + DZA65_RS01765 0.66 -0.3 385,255 + DZA65_RS01765 0.66 +0.7 385,255 + DZA65_RS01765 0.66 -0.9 385,255 + DZA65_RS01765 0.66 -2.1 385,255 + DZA65_RS01765 0.66 +0.1 385,255 + DZA65_RS01765 0.66 -0.6 385,255 + DZA65_RS01765 0.66 -0.7 385,255 + DZA65_RS01765 0.66 -0.8 385,256 - DZA65_RS01765 0.66 -1.1 385,256 - DZA65_RS01765 0.66 -0.1 385,256 - DZA65_RS01765 0.66 +0.3 385,256 - DZA65_RS01765 0.66 -0.0 385,332 + DZA65_RS01765 0.75 -1.2 385,333 - DZA65_RS01765 0.75 -1.5 385,503 + -0.2 385,503 + -1.3 385,542 + -0.5 385,543 - +0.2
Or see this region's nucleotide sequence