Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS01740 and DZA65_RS01745 are separated by 64 nucleotides DZA65_RS01745 and DZA65_RS01750 are separated by 276 nucleotides DZA65_RS01750 and DZA65_RS01755 are separated by 231 nucleotides
DZA65_RS01740: DZA65_RS01740 - LysR family transcriptional regulator, at 378,068 to 378,963
_RS01740
DZA65_RS01745: DZA65_RS01745 - NAD(P)H-dependent oxidoreductase, at 379,028 to 379,609
_RS01745
DZA65_RS01750: DZA65_RS01750 - DNA topoisomerase IV subunit A, at 379,886 to 382,162
_RS01750
DZA65_RS01755: DZA65_RS01755 - 1-acylglycerol-3-phosphate O-acyltransferase, at 382,394 to 383,131
_RS01755
Position (kb) 379
380
381
382
383 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 378.888 kb on + strand at 378.962 kb on - strand at 378.990 kb on + strand at 378.991 kb on - strand at 378.991 kb on - strand at 379.009 kb on + strand at 379.010 kb on - strand at 379.010 kb on - strand at 379.010 kb on - strand at 379.010 kb on - strand at 379.079 kb on + strand at 379.079 kb on + strand at 379.080 kb on - strand at 379.080 kb on - strand at 379.080 kb on - strand at 379.117 kb on + strand, within DZA65_RS01745 at 379.117 kb on + strand, within DZA65_RS01745 at 379.117 kb on + strand, within DZA65_RS01745 at 379.117 kb on + strand, within DZA65_RS01745 at 379.117 kb on + strand, within DZA65_RS01745 at 379.118 kb on - strand, within DZA65_RS01745 at 379.118 kb on - strand, within DZA65_RS01745 at 379.118 kb on - strand, within DZA65_RS01745 at 379.118 kb on - strand, within DZA65_RS01745 at 379.118 kb on - strand, within DZA65_RS01745 at 379.168 kb on - strand, within DZA65_RS01745 at 379.254 kb on + strand, within DZA65_RS01745 at 379.254 kb on + strand, within DZA65_RS01745 at 379.254 kb on + strand, within DZA65_RS01745 at 379.254 kb on + strand, within DZA65_RS01745 at 379.254 kb on + strand, within DZA65_RS01745 at 379.254 kb on + strand, within DZA65_RS01745 at 379.254 kb on + strand, within DZA65_RS01745 at 379.254 kb on + strand, within DZA65_RS01745 at 379.255 kb on - strand, within DZA65_RS01745 at 379.255 kb on - strand, within DZA65_RS01745 at 379.255 kb on - strand, within DZA65_RS01745 at 379.255 kb on - strand, within DZA65_RS01745 at 379.255 kb on - strand, within DZA65_RS01745 at 379.255 kb on - strand, within DZA65_RS01745 at 379.255 kb on - strand, within DZA65_RS01745 at 379.287 kb on + strand, within DZA65_RS01745 at 379.295 kb on - strand, within DZA65_RS01745 at 379.295 kb on - strand, within DZA65_RS01745 at 379.329 kb on + strand, within DZA65_RS01745 at 379.330 kb on - strand, within DZA65_RS01745 at 379.368 kb on + strand, within DZA65_RS01745 at 379.369 kb on - strand, within DZA65_RS01745 at 379.369 kb on - strand, within DZA65_RS01745 at 379.369 kb on - strand, within DZA65_RS01745 at 379.416 kb on + strand, within DZA65_RS01745 at 379.417 kb on - strand, within DZA65_RS01745 at 379.417 kb on - strand, within DZA65_RS01745 at 379.417 kb on - strand, within DZA65_RS01745 at 379.417 kb on - strand, within DZA65_RS01745 at 379.544 kb on - strand, within DZA65_RS01745 at 379.570 kb on + strand at 379.598 kb on + strand at 379.598 kb on + strand at 379.598 kb on + strand at 379.598 kb on + strand at 379.598 kb on + strand at 379.598 kb on + strand at 379.598 kb on + strand at 379.599 kb on - strand at 379.599 kb on - strand at 379.599 kb on - strand at 379.599 kb on - strand at 379.599 kb on - strand at 379.599 kb on - strand at 379.599 kb on - strand at 379.599 kb on - strand at 379.599 kb on - strand at 379.603 kb on + strand at 379.604 kb on - strand at 379.604 kb on - strand at 379.631 kb on + strand at 379.631 kb on + strand at 379.632 kb on - strand at 379.632 kb on - strand at 379.639 kb on + strand at 379.639 kb on + strand at 379.639 kb on + strand at 379.639 kb on + strand at 379.639 kb on + strand at 379.639 kb on + strand at 379.640 kb on - strand at 379.640 kb on - strand at 379.640 kb on - strand at 379.640 kb on - strand at 379.646 kb on + strand at 379.646 kb on + strand at 379.646 kb on + strand at 379.647 kb on - strand at 379.647 kb on - strand at 379.647 kb on - strand at 379.647 kb on - strand at 379.659 kb on - strand at 379.666 kb on - strand at 379.666 kb on - strand at 379.721 kb on - strand at 379.721 kb on - strand at 379.721 kb on - strand at 379.791 kb on + strand at 379.794 kb on + strand at 379.794 kb on + strand at 379.875 kb on - strand at 382.161 kb on - strand at 382.161 kb on - strand at 382.198 kb on - strand at 382.210 kb on - strand at 382.290 kb on + strand at 382.290 kb on + strand at 382.290 kb on + strand at 382.290 kb on + strand at 382.290 kb on + strand at 382.291 kb on - strand at 382.291 kb on - strand at 382.291 kb on - strand at 382.345 kb on + strand at 382.361 kb on + strand at 382.361 kb on + strand at 382.361 kb on + strand at 382.361 kb on + strand at 382.361 kb on + strand at 382.361 kb on + strand at 382.361 kb on + strand at 382.364 kb on + strand at 382.364 kb on + strand at 383.129 kb on + strand at 383.129 kb on + strand at 383.130 kb on - strand at 383.130 kb on - strand at 383.130 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 378,888 + +0.1 378,962 - +0.4 378,990 + -0.8 378,991 - -1.6 378,991 - -1.1 379,009 + -0.2 379,010 - +0.8 379,010 - -0.2 379,010 - +0.6 379,010 - +0.7 379,079 + -0.6 379,079 + -0.9 379,080 - -1.2 379,080 - +1.1 379,080 - -0.3 379,117 + DZA65_RS01745 0.15 +1.1 379,117 + DZA65_RS01745 0.15 -2.6 379,117 + DZA65_RS01745 0.15 +0.4 379,117 + DZA65_RS01745 0.15 +0.1 379,117 + DZA65_RS01745 0.15 -0.6 379,118 - DZA65_RS01745 0.15 -1.3 379,118 - DZA65_RS01745 0.15 -1.8 379,118 - DZA65_RS01745 0.15 -2.7 379,118 - DZA65_RS01745 0.15 +0.2 379,118 - DZA65_RS01745 0.15 +0.7 379,168 - DZA65_RS01745 0.24 -0.3 379,254 + DZA65_RS01745 0.39 -2.3 379,254 + DZA65_RS01745 0.39 +1.7 379,254 + DZA65_RS01745 0.39 -0.6 379,254 + DZA65_RS01745 0.39 -1.1 379,254 + DZA65_RS01745 0.39 -2.6 379,254 + DZA65_RS01745 0.39 +0.2 379,254 + DZA65_RS01745 0.39 +0.1 379,254 + DZA65_RS01745 0.39 -1.1 379,255 - DZA65_RS01745 0.39 -0.4 379,255 - DZA65_RS01745 0.39 +0.2 379,255 - DZA65_RS01745 0.39 +0.3 379,255 - DZA65_RS01745 0.39 +0.3 379,255 - DZA65_RS01745 0.39 +0.4 379,255 - DZA65_RS01745 0.39 -0.6 379,255 - DZA65_RS01745 0.39 +1.5 379,287 + DZA65_RS01745 0.45 -0.3 379,295 - DZA65_RS01745 0.46 -1.1 379,295 - DZA65_RS01745 0.46 +0.3 379,329 + DZA65_RS01745 0.52 -0.2 379,330 - DZA65_RS01745 0.52 -0.2 379,368 + DZA65_RS01745 0.58 -1.1 379,369 - DZA65_RS01745 0.59 -0.1 379,369 - DZA65_RS01745 0.59 -0.3 379,369 - DZA65_RS01745 0.59 +1.1 379,416 + DZA65_RS01745 0.67 -0.6 379,417 - DZA65_RS01745 0.67 -0.7 379,417 - DZA65_RS01745 0.67 +0.5 379,417 - DZA65_RS01745 0.67 -0.5 379,417 - DZA65_RS01745 0.67 -0.6 379,544 - DZA65_RS01745 0.89 -1.7 379,570 + -1.4 379,598 + +0.7 379,598 + -2.2 379,598 + -0.5 379,598 + +0.1 379,598 + -1.4 379,598 + +0.4 379,598 + +0.3 379,599 - +0.3 379,599 - -0.4 379,599 - -0.3 379,599 - +0.7 379,599 - +0.1 379,599 - -0.1 379,599 - -1.2 379,599 - +0.1 379,599 - -0.6 379,603 + +0.4 379,604 - +0.7 379,604 - -1.3 379,631 + -2.0 379,631 + -0.4 379,632 - -0.3 379,632 - -0.3 379,639 + +1.1 379,639 + -0.0 379,639 + -0.1 379,639 + +0.0 379,639 + +1.0 379,639 + -0.2 379,640 - +1.5 379,640 - -1.0 379,640 - +0.8 379,640 - +1.3 379,646 + -1.5 379,646 + +1.2 379,646 + +0.5 379,647 - -0.0 379,647 - +0.7 379,647 - +1.7 379,647 - -0.5 379,659 - -1.6 379,666 - -0.3 379,666 - +0.5 379,721 - +0.3 379,721 - -0.3 379,721 - -0.6 379,791 + -1.4 379,794 + -1.6 379,794 + +0.3 379,875 - -0.4 382,161 - +0.1 382,161 - -0.6 382,198 - -2.9 382,210 - -1.5 382,290 + -1.1 382,290 + +0.9 382,290 + -0.1 382,290 + -0.5 382,290 + -0.4 382,291 - -0.5 382,291 - -0.3 382,291 - +0.1 382,345 + -1.7 382,361 + -0.6 382,361 + -0.9 382,361 + -0.4 382,361 + +0.5 382,361 + -0.0 382,361 + +0.7 382,361 + -1.5 382,364 + -1.3 382,364 + +0.1 383,129 + -1.1 383,129 + +0.3 383,130 - -0.3 383,130 - +0.5 383,130 - -0.1
Or see this region's nucleotide sequence