Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS00600

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
138,309	+				-1.5
138,310	-				+0.5
138,328	+				-1.4
138,329	-				-1.3
138,501	-		DZA65_RS00595	0.20	+0.4
138,501	-		DZA65_RS00595	0.20	-1.2
138,509	+		DZA65_RS00595	0.20	+0.8
138,587	+		DZA65_RS00595	0.28	-0.1
138,587	+		DZA65_RS00595	0.28	-0.7
138,587	+		DZA65_RS00595	0.28	+0.8
138,588	-		DZA65_RS00595	0.28	-0.2
138,588	-		DZA65_RS00595	0.28	+0.0
138,709	+		DZA65_RS00595	0.40	-0.0
138,709	+		DZA65_RS00595	0.40	-0.5
138,709	+		DZA65_RS00595	0.40	-0.9
138,710	-		DZA65_RS00595	0.40	-0.0
138,884	+		DZA65_RS00595	0.58	-1.4
138,884	+		DZA65_RS00595	0.58	-0.8
138,885	-		DZA65_RS00595	0.58	+0.2
138,936	+		DZA65_RS00595	0.63	-0.2
138,937	-		DZA65_RS00595	0.63	-0.8
138,937	-		DZA65_RS00595	0.63	-0.2
138,941	+		DZA65_RS00595	0.63	-2.3
138,941	+		DZA65_RS00595	0.63	+0.2
138,941	+		DZA65_RS00595	0.63	-0.8
138,941	+		DZA65_RS00595	0.63	+0.4
138,941	+		DZA65_RS00595	0.63	+0.8
138,942	-		DZA65_RS00595	0.63	-0.4
138,942	-		DZA65_RS00595	0.63	-1.6
138,942	-		DZA65_RS00595	0.63	-1.4
138,956	+		DZA65_RS00595	0.65	-0.8
138,956	+		DZA65_RS00595	0.65	+0.3
138,956	+		DZA65_RS00595	0.65	-1.2
138,956	+		DZA65_RS00595	0.65	+1.1
138,956	+		DZA65_RS00595	0.65	-0.8
138,956	+		DZA65_RS00595	0.65	-0.0
138,956	+		DZA65_RS00595	0.65	-1.4
138,956	+		DZA65_RS00595	0.65	-0.2
138,956	+		DZA65_RS00595	0.65	-0.5
138,956	+		DZA65_RS00595	0.65	-0.5
138,957	-		DZA65_RS00595	0.65	-1.2
138,957	-		DZA65_RS00595	0.65	-1.9
138,957	-		DZA65_RS00595	0.65	-0.1
138,957	-		DZA65_RS00595	0.65	-0.0
138,957	-		DZA65_RS00595	0.65	+0.3
138,957	-		DZA65_RS00595	0.65	+0.5
138,957	-		DZA65_RS00595	0.65	-0.7
138,957	-		DZA65_RS00595	0.65	-0.7
138,976	+		DZA65_RS00595	0.67	-0.0
139,112	+		DZA65_RS00595	0.80	+0.2
139,113	-		DZA65_RS00595	0.80	-2.5
139,178	+		DZA65_RS00595	0.87	-0.6
139,179	-		DZA65_RS00595	0.87	-0.5
139,179	-		DZA65_RS00595	0.87	+0.7
139,179	-		DZA65_RS00595	0.87	-0.1
139,187	-		DZA65_RS00595	0.88	+0.4
139,228	+				+0.6
139,228	+				+0.7
139,250	+				-0.8
139,250	+				-0.8
139,250	+				-0.4
139,250	+				-1.0
139,250	+				-0.4
139,250	+				-0.8
139,250	+				-2.8
139,251	-				-0.7
139,251	-				-0.2
139,251	-				-1.7
139,251	-				-1.2
139,251	-				-0.7
139,251	-				-1.8
139,251	-				-0.1
139,251	-				+1.0
139,251	-				-1.2
139,283	+				+0.8
139,283	+				-0.2
139,318	+				-1.7
139,318	+				+0.5
139,318	+				-0.8
139,318	+				-1.3
139,318	+				+0.4
139,318	+				-1.1
139,318	+				+0.1
139,318	+				+0.0
139,318	+				-0.4
139,319	-				+0.4
139,319	-				-0.6
139,319	-				+1.1
139,319	-				-0.0
139,319	-				-1.0
139,319	-				+0.5
139,319	-				-0.5
139,319	-				+1.3
139,319	-				-2.2
139,319	-				-1.2
139,493	-		DZA65_RS00600	0.20	-0.6
139,608	+		DZA65_RS00600	0.33	+0.3
139,608	+		DZA65_RS00600	0.33	+0.4
139,608	+		DZA65_RS00600	0.33	-0.2
139,608	+		DZA65_RS00600	0.33	-1.6
139,609	-		DZA65_RS00600	0.33	-0.2
139,609	-		DZA65_RS00600	0.33	+0.2
139,609	-		DZA65_RS00600	0.33	-1.5
139,611	+		DZA65_RS00600	0.33	-0.8
139,612	-		DZA65_RS00600	0.34	+1.8
139,612	-		DZA65_RS00600	0.34	-0.2
139,612	-		DZA65_RS00600	0.34	+0.2
139,612	-		DZA65_RS00600	0.34	-1.8
139,612	-		DZA65_RS00600	0.34	-1.8
139,612	-		DZA65_RS00600	0.34	+0.2
139,612	-		DZA65_RS00600	0.34	-0.6
139,612	-		DZA65_RS00600	0.34	-0.1
139,612	-		DZA65_RS00600	0.34	-0.3
139,612	-		DZA65_RS00600	0.34	+0.2
139,705	-		DZA65_RS00600	0.44	-0.8
139,705	-		DZA65_RS00600	0.44	+0.9
139,887	+		DZA65_RS00600	0.64	-1.6
140,209	+				-0.1
140,209	+				-0.8
140,210	-				+0.3
140,210	-				-1.0
140,485	-		DZA65_RS00605	0.33	+0.8
140,618	+		DZA65_RS00605	0.49	-0.4
140,618	+		DZA65_RS00605	0.49	-1.8
140,619	-		DZA65_RS00605	0.49	+0.3
140,619	-		DZA65_RS00605	0.49	-1.6
140,619	-		DZA65_RS00605	0.49	-2.3
140,654	-		DZA65_RS00605	0.53	-0.8
140,887	+		DZA65_RS00605	0.82	+0.5
140,887	+		DZA65_RS00605	0.82	+0.2
140,888	-		DZA65_RS00605	0.82	-0.4
140,888	-		DZA65_RS00605	0.82	-1.0
140,888	-		DZA65_RS00605	0.82	+0.3
140,888	-		DZA65_RS00605	0.82	+1.2
140,888	-		DZA65_RS00605	0.82	+0.6
140,930	+		DZA65_RS00605	0.87	-1.0
140,931	-		DZA65_RS00605	0.87	-2.3
140,931	-		DZA65_RS00605	0.87	-0.8
140,931	-		DZA65_RS00605	0.87	-0.6
140,931	-		DZA65_RS00605	0.87	+0.0
140,931	-		DZA65_RS00605	0.87	-1.0
140,931	-		DZA65_RS00605	0.87	-0.6
140,931	-		DZA65_RS00605	0.87	-0.8
140,947	+		DZA65_RS00605	0.89	-0.6
140,947	+		DZA65_RS00605	0.89	+0.8
140,947	+		DZA65_RS00605	0.89	-0.6
140,947	+		DZA65_RS00605	0.89	-1.1
140,948	-		DZA65_RS00605	0.89	+0.5
140,949	+		DZA65_RS00605	0.89	-2.6
140,950	-		DZA65_RS00605	0.89	-1.4
140,950	-		DZA65_RS00605	0.89	-0.6
140,997	+				+0.9
141,045	-				-0.7
141,045	-				-0.9
141,164	+		DZA65_RS00610	0.17	+1.2
141,191	+		DZA65_RS00610	0.21	-0.8
141,191	+		DZA65_RS00610	0.21	-0.8