Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS00345

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
82,116	+		DZA65_RS00335	0.29	-0.8
82,116	+		DZA65_RS00335	0.29	-0.8
82,116	+		DZA65_RS00335	0.29	-1.0
82,116	+		DZA65_RS00335	0.29	-0.7
82,116	+		DZA65_RS00335	0.29	-0.2
82,116	+		DZA65_RS00335	0.29	-1.6
82,116	+		DZA65_RS00335	0.29	-0.2
82,116	+		DZA65_RS00335	0.29	-1.2
82,116	+		DZA65_RS00335	0.29	-1.3
82,116	+		DZA65_RS00335	0.29	+0.2
82,116	+		DZA65_RS00335	0.29	+0.1
82,116	+		DZA65_RS00335	0.29	-1.2
82,116	+		DZA65_RS00335	0.29	-0.9
82,117	-		DZA65_RS00335	0.29	-0.4
82,117	-		DZA65_RS00335	0.29	-0.7
82,117	-		DZA65_RS00335	0.29	+0.2
82,117	-		DZA65_RS00335	0.29	-0.8
82,117	-		DZA65_RS00335	0.29	+1.5
82,117	-		DZA65_RS00335	0.29	+0.8
82,117	-		DZA65_RS00335	0.29	-0.0
82,117	-		DZA65_RS00335	0.29	+1.0
82,117	-		DZA65_RS00335	0.29	-1.6
82,161	+		DZA65_RS00335	0.37	-0.7
82,161	+		DZA65_RS00335	0.37	-2.2
82,162	-		DZA65_RS00335	0.37	-1.3
82,162	-		DZA65_RS00335	0.37	+0.0
82,162	-		DZA65_RS00335	0.37	+0.4
82,162	-		DZA65_RS00335	0.37	+0.6
82,162	-		DZA65_RS00335	0.37	-1.8
82,258	+		DZA65_RS00335	0.53	+0.2
82,259	-		DZA65_RS00335	0.54	-0.6
82,345	+		DZA65_RS00335	0.69	+0.3
82,345	+		DZA65_RS00335	0.69	-1.0
82,345	+		DZA65_RS00335	0.69	-0.4
82,345	+		DZA65_RS00335	0.69	-0.4
82,345	+		DZA65_RS00335	0.69	-0.6
82,345	+		DZA65_RS00335	0.69	-0.6
82,345	+		DZA65_RS00335	0.69	-0.4
82,345	+		DZA65_RS00335	0.69	+0.3
82,345	+		DZA65_RS00335	0.69	+0.5
82,346	-		DZA65_RS00335	0.69	+1.3
82,346	-		DZA65_RS00335	0.69	-0.8
82,346	-		DZA65_RS00335	0.69	-0.0
82,346	-		DZA65_RS00335	0.69	-1.1
82,346	-		DZA65_RS00335	0.69	-0.1
82,346	-		DZA65_RS00335	0.69	-2.1
82,346	-		DZA65_RS00335	0.69	-0.8
82,346	-		DZA65_RS00335	0.69	-1.0
82,346	-		DZA65_RS00335	0.69	+0.5
82,381	+		DZA65_RS00335	0.75	-1.0
82,384	+		DZA65_RS00335	0.75	-0.7
82,384	+		DZA65_RS00335	0.75	+1.2
82,384	+		DZA65_RS00335	0.75	-1.2
82,384	+		DZA65_RS00335	0.75	+0.2
82,384	+		DZA65_RS00335	0.75	-0.8
82,385	-		DZA65_RS00335	0.76	+0.4
82,385	-		DZA65_RS00335	0.76	+0.4
82,389	+		DZA65_RS00335	0.76	-1.0
82,389	+		DZA65_RS00335	0.76	+0.4
82,390	-		DZA65_RS00335	0.76	-0.4
82,390	-		DZA65_RS00335	0.76	-0.3
82,390	-		DZA65_RS00335	0.76	-1.1
82,468	+				+1.4
82,468	+				+1.8
82,469	-				+0.2
82,469	-				+1.8
82,469	-				-1.8
82,528	+				+1.8
82,528	+				+0.3
82,528	+				-1.9
82,528	+				+0.7
82,528	+				-1.0
82,528	+				-1.9
82,528	+				+0.3
82,529	-				-0.9
82,529	-				+1.8
82,529	-				+1.0
82,529	-				-1.0
82,529	-				+0.4
82,529	-				-0.3
82,529	-				-0.6
82,574	+				-0.4
82,574	+				-0.1
82,613	-				+0.3
82,631	+				-0.2
82,661	+				-1.4
82,661	+				-1.2
82,662	-				-1.8
82,671	+				+1.1
82,671	+				-0.1
82,671	+				+0.2
82,671	+				-0.2
82,671	+				-1.4
82,671	+				-0.4
82,671	+				+0.3
82,671	+				+0.1
82,671	+				+0.5
82,672	-				-2.1
82,672	-				-0.0
82,672	-				+1.0
82,672	-				-1.2
82,672	-				-1.0
82,672	-				-0.6
82,672	-				-0.3
82,672	-				-1.3
82,672	-				-0.6
82,672	-				+1.3
82,672	-				-0.8
82,672	-				+0.6
82,672	-				-0.7
82,672	-				-0.3
82,672	-				-0.8
82,672	-				-0.1
82,673	+				+1.0
82,673	+				-0.6
82,673	+				-2.0
82,673	+				-0.1
82,673	+				-1.0
82,673	+				-0.4
82,673	+				-0.9
82,673	+				-0.6
82,673	+				+1.3
82,673	+				+1.0
82,673	+				-0.7
82,673	+				-0.4
82,673	+				+0.5
82,673	+				+0.6
82,673	+				+0.5
82,674	-				-2.1
82,674	-				+0.8
82,674	-				-1.4
82,674	-				-0.3
82,674	-				+1.0
82,674	-				-0.8
82,674	-				-1.0
82,674	-				+0.2
82,692	+				+1.4
82,692	+				+1.0
82,692	+				-2.5
82,693	-				+2.1
82,693	-				-1.1
82,693	-				-1.8
82,693	-				+0.0
82,693	-				-1.9
82,699	+				+1.8
82,699	+				+0.9
82,699	+				+0.2
82,699	+				+0.4
82,699	+				-0.5
82,700	-				-0.8
82,700	-				-1.4
82,706	+				-1.9
82,706	+				-0.6
82,706	+				-0.8
82,706	+				-0.7
82,706	+				+0.0
82,707	-				+1.8
82,707	-				-1.0
82,707	-				-0.9
82,707	-				-0.9
82,707	-				-0.2
82,720	+				+0.4
82,720	+				-1.0
82,720	+				+0.1
82,720	+				-0.2
82,721	-				-1.6
82,721	-				+0.6
82,721	-				+0.2
82,721	-				-0.1
82,721	-				-1.7
82,727	+				-0.8
82,727	+				+1.3
82,727	+				-0.6
82,727	+				-1.5
82,727	+				-0.8
82,727	+				+0.4
82,727	+				-0.7
82,727	+				-1.2
82,727	+				-1.4
82,727	+				-0.6
82,727	+				-1.3
82,728	-				+1.8
82,728	-				-0.2
82,728	-				+0.6
82,728	-				+0.5
82,728	-				+0.5
82,728	-				+0.3
82,728	-				-0.6
82,728	-				-0.6
82,729	+				+0.8
82,729	+				+0.8
82,729	+				+0.5
82,729	+				-0.8
82,729	+				-1.1
82,729	+				-2.3
82,729	+				-0.3
82,729	+				-1.4
82,729	+				-0.2
82,729	+				+0.8
82,729	+				-0.6
82,729	+				+0.3
82,729	+				-1.7
82,729	+				+2.8
82,730	-				-0.1
82,730	-				-1.2
82,730	-				-0.7
82,730	-				-0.2
82,730	-				+0.2
82,730	-				-0.8
82,730	-				-1.2
82,730	-				-0.5
82,730	-				-1.0
82,730	-				-0.2
82,730	-				+0.2
82,988	+				-1.7
83,034	+				-0.4
83,035	-				-0.9
83,039	+				-1.1
83,053	+				+1.0
83,053	+				+0.8
83,053	+				-0.7
83,054	-				+1.2
83,092	+				-0.4
83,092	+				-0.2
83,093	-				-0.0
83,093	-				+0.2
83,096	+				-1.1
83,096	+				-0.6
83,096	+				-0.8
83,096	+				-0.1
83,096	+				+0.8
83,097	-				-1.5
83,097	-				+0.6
83,097	-				+0.8
83,210	+		DZA65_RS00345	0.13	-1.0
83,210	+		DZA65_RS00345	0.13	-1.8
83,210	+		DZA65_RS00345	0.13	+0.1
83,210	+		DZA65_RS00345	0.13	-0.1
83,210	+		DZA65_RS00345	0.13	-0.4
83,211	-		DZA65_RS00345	0.13	-0.8
83,211	-		DZA65_RS00345	0.13	-0.8
83,211	-		DZA65_RS00345	0.13	+0.8
83,211	-		DZA65_RS00345	0.13	-0.2
83,211	-		DZA65_RS00345	0.13	-0.6
83,211	-		DZA65_RS00345	0.13	+0.3
83,211	-		DZA65_RS00345	0.13	-2.0
83,211	-		DZA65_RS00345	0.13	+0.1
83,226	-		DZA65_RS00345	0.14	-2.6
83,292	-		DZA65_RS00345	0.22	-0.2
83,328	+		DZA65_RS00345	0.26	-0.1
83,328	+		DZA65_RS00345	0.26	-1.0
83,328	+		DZA65_RS00345	0.26	+0.6
83,328	+		DZA65_RS00345	0.26	+1.8
83,328	+		DZA65_RS00345	0.26	-1.7
83,328	+		DZA65_RS00345	0.26	-1.5
83,328	+		DZA65_RS00345	0.26	-0.0
83,329	-		DZA65_RS00345	0.26	-0.6
83,329	-		DZA65_RS00345	0.26	+0.6
83,329	-		DZA65_RS00345	0.26	+0.3
83,329	-		DZA65_RS00345	0.26	-0.2
83,329	-		DZA65_RS00345	0.26	-0.2
83,329	-		DZA65_RS00345	0.26	-0.4
83,426	+		DZA65_RS00345	0.37	-2.3
83,427	-		DZA65_RS00345	0.37	+1.1
83,465	+		DZA65_RS00345	0.41	-1.4
83,465	+		DZA65_RS00345	0.41	-0.2
83,465	+		DZA65_RS00345	0.41	-2.0
83,466	-		DZA65_RS00345	0.41	-1.8
83,552	+		DZA65_RS00345	0.51	-0.2
83,552	+		DZA65_RS00345	0.51	-1.7
83,610	+		DZA65_RS00345	0.57	+0.3
83,610	+		DZA65_RS00345	0.57	+0.8
83,774	+		DZA65_RS00345	0.76	+0.6
83,774	+		DZA65_RS00345	0.76	+1.2
83,775	-		DZA65_RS00345	0.76	-0.2
83,775	-		DZA65_RS00345	0.76	+1.6
83,916	+				-0.6
83,916	+				-0.9
83,916	+				-0.5
83,916	+				+1.4
83,917	-				+1.3
83,942	-				+1.8
83,952	+				-1.2
83,952	+				-0.7
83,952	+				-1.1
83,952	+				+0.1
83,952	+				+1.8
83,952	+				+0.2
83,952	+				-0.2
83,952	+				-0.2
83,952	+				-1.7
83,952	+				-0.2
83,952	+				-0.3
83,952	+				+0.4
83,952	+				-0.5
83,952	+				-1.1
83,952	+				-0.4
83,952	+				+1.8
83,952	+				-0.6
83,952	+				+1.2
83,952	+				+1.8
83,952	+				+0.2
83,952	+				-1.4
83,952	+				-0.6
83,952	+				+0.2
83,952	+				+0.8
83,952	+				-1.2
83,952	+				-1.3
83,952	+				-0.6
83,952	+				-0.8
83,952	+				+1.2
83,952	+				-0.1
83,952	+				-0.2
83,953	-				-1.2
83,953	-				-0.7
83,953	-				-0.0
83,953	-				-0.4
83,953	-				+0.8
83,953	-				-1.4
83,953	-				-1.4
83,953	-				+0.2
83,953	-				-0.6
83,953	-				-0.2
83,953	-				-0.3
83,953	-				+1.1
83,953	-				+1.4
83,953	-				-1.0
83,953	-				+0.9
83,953	-				-0.7
83,953	-				+0.2
83,953	-				+0.2
83,953	-				-0.4
83,953	-				+0.4
83,953	-				+1.8
83,953	-				-0.7
83,953	-				-0.0
83,953	-				-0.2
83,953	-				-0.2
83,953	-				-0.8
83,953	-				-0.9
83,953	-				-0.9
83,953	-				+0.2
83,953	-				-0.7
83,953	-				-0.1
83,954	+				+1.3
83,954	+				-1.0
83,954	+				-0.2
83,954	+				+0.3
83,954	+				+0.9
83,954	+				-0.2
83,954	+				-0.6
83,954	+				-1.6
83,954	+				-0.2
83,954	+				+1.2
83,954	+				-0.0
83,954	+				-1.5
83,954	+				+0.8
83,954	+				-0.8
83,954	+				-0.8
83,954	+				-0.0
83,955	-				-2.0
83,955	-				+1.8
83,955	-				-0.2
83,955	-				-1.3
83,955	-				+0.1
83,955	-				-1.0
83,955	-				+0.8
83,955	-				-1.6
83,955	-				+0.3
83,955	-				+0.6
83,955	-				-1.4
83,955	-				+1.8
83,955	-				-1.0
83,955	-				-1.2
83,988	+				+0.4
83,988	+				+1.0
84,003	-				-1.0
84,003	-				-0.0
84,004	+				-0.2
84,005	-				-1.4
84,009	+				-0.2
84,010	-				-0.2
84,010	-				+0.8
84,015	+				-0.7
84,016	-				-0.4
84,017	+				-1.1
84,017	+				-0.8
84,017	+				-1.4
84,017	+				-0.3
84,017	+				+0.2
84,018	-				-1.3
84,018	-				-2.9
84,018	-				-1.1
84,018	-				-1.0
84,018	-				+0.8
84,171	-		DZA65_RS00350	0.86	+0.3
84,175	-		DZA65_RS00350	0.88	+0.3
84,175	-		DZA65_RS00350	0.88	-0.7
84,175	-		DZA65_RS00350	0.88	-0.6
84,258	+				-0.7
84,278	+				+0.8
84,278	+				-0.4
84,278	+				+0.4
84,279	-				+0.4
84,279	-				-1.6
84,310	+				-0.9
84,313	+				+0.2
84,313	+				-1.0
84,313	+				+0.8
84,313	+				-0.0
84,313	+				+1.1
84,313	+				+0.0
84,313	+				-0.4
84,313	+				-0.0
84,314	-				-1.9
84,314	-				-1.3
84,314	-				+0.1
84,314	-				+0.5
84,314	-				-0.1
84,314	-				+1.1
84,314	-				-1.2
84,314	-				-1.2
84,314	-				-0.2
84,317	+				-0.4
84,317	+				+0.3
84,317	+				-2.0
84,317	+				+1.0
84,317	+				+0.4
84,317	+				-0.8
84,317	+				+1.2
84,317	+				-0.6
84,318	-				-0.1
84,318	-				+0.2
84,318	-				-1.0
84,318	-				-0.1
84,432	+				+0.8
84,432	+				-0.3
84,432	+				-0.8
84,433	-				-0.8
84,433	-				+0.8
84,433	-				-0.2
84,433	-				-1.1
84,438	+				-0.2
84,438	+				-1.6
84,438	+				+0.5
84,438	+				+0.1
84,438	+				-0.6
84,438	+				-1.4
84,439	-				-0.8
84,439	-				-0.1
84,439	-				-0.1
84,439	-				-0.8
84,439	-				+1.2
84,439	-				-0.5
84,439	-				-0.6
84,439	-				+0.2
84,439	-				+0.8
84,440	+				-0.0
84,474	+		DZA65_RS00355	0.12	-0.6
84,474	+		DZA65_RS00355	0.12	-0.2
84,475	-		DZA65_RS00355	0.12	-0.6
84,475	-		DZA65_RS00355	0.12	-2.6
84,475	-		DZA65_RS00355	0.12	+0.1
84,590	+		DZA65_RS00355	0.20	+0.0
84,612	+		DZA65_RS00355	0.22	-1.0
84,612	+		DZA65_RS00355	0.22	-0.6
84,612	+		DZA65_RS00355	0.22	-0.6
84,612	+		DZA65_RS00355	0.22	+1.2
84,612	+		DZA65_RS00355	0.22	+0.8
84,613	-		DZA65_RS00355	0.22	-0.4
84,613	-		DZA65_RS00355	0.22	-0.2
84,613	-		DZA65_RS00355	0.22	-0.3
84,613	-		DZA65_RS00355	0.22	+1.8
84,613	-		DZA65_RS00355	0.22	-0.2
84,613	-		DZA65_RS00355	0.22	+0.3
84,613	-		DZA65_RS00355	0.22	-1.6
84,613	-		DZA65_RS00355	0.22	+0.3
84,613	-		DZA65_RS00355	0.22	-2.4
84,613	-		DZA65_RS00355	0.22	+0.8
84,687	-		DZA65_RS00355	0.27	-0.7
84,689	+		DZA65_RS00355	0.27	-0.4
84,689	+		DZA65_RS00355	0.27	-0.4
84,689	+		DZA65_RS00355	0.27	-1.9
84,689	+		DZA65_RS00355	0.27	-1.0
84,689	+		DZA65_RS00355	0.27	-0.6
84,689	+		DZA65_RS00355	0.27	-2.1
84,689	+				-0.6
84,690	-		DZA65_RS00355	0.28	-0.8
84,690	-		DZA65_RS00355	0.28	-1.0
84,690	-		DZA65_RS00355	0.28	-1.8
84,690	-		DZA65_RS00355	0.28	-0.0
84,690	-		DZA65_RS00355	0.28	-0.6
84,690	-		DZA65_RS00355	0.28	+0.0
84,690	-		DZA65_RS00355	0.28	-0.7
84,711	+		DZA65_RS00355	0.29	-1.1
84,711	+		DZA65_RS00355	0.29	-2.1
84,711	+		DZA65_RS00355	0.29	-0.4
84,711	+		DZA65_RS00355	0.29	-2.6
84,711	+		DZA65_RS00355	0.29	+0.7
84,711	+		DZA65_RS00355	0.29	-1.4
84,711	+		DZA65_RS00355	0.29	-0.2
84,711	+		DZA65_RS00355	0.29	-0.8
84,712	-		DZA65_RS00355	0.29	-1.0
84,712	-		DZA65_RS00355	0.29	-0.4
84,712	-		DZA65_RS00355	0.29	-0.2
84,712	-		DZA65_RS00355	0.29	+0.9
84,712	-		DZA65_RS00355	0.29	-0.2
84,712	-		DZA65_RS00355	0.29	-0.4
84,712	-		DZA65_RS00355	0.29	-0.9
84,712	-		DZA65_RS00355	0.29	+0.8
84,712	-		DZA65_RS00355	0.29	-1.2
84,712	-		DZA65_RS00355	0.29	-1.0
84,739	-		DZA65_RS00355	0.31	-0.2
84,777	+		DZA65_RS00355	0.34	+0.2
84,777	+		DZA65_RS00355	0.34	+0.4
84,777	+		DZA65_RS00355	0.34	+0.2
84,777	+		DZA65_RS00355	0.34	-1.4
84,777	+		DZA65_RS00355	0.34	-0.0
84,888	+		DZA65_RS00355	0.42	-0.8
84,888	+		DZA65_RS00355	0.42	-1.4
84,888	+		DZA65_RS00355	0.42	-0.0
84,888	+		DZA65_RS00355	0.42	-0.8
84,888	+		DZA65_RS00355	0.42	-0.8
84,888	+		DZA65_RS00355	0.42	+0.8
84,889	-		DZA65_RS00355	0.42	+1.0
84,889	-		DZA65_RS00355	0.42	-0.0
84,889	-		DZA65_RS00355	0.42	-0.2
84,889	-		DZA65_RS00355	0.42	+1.2
84,889	-		DZA65_RS00355	0.42	+1.8
84,894	-		DZA65_RS00355	0.43	+0.2
84,987	-		DZA65_RS00355	0.50	+0.4
84,987	-		DZA65_RS00355	0.50	-0.8