Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS00140

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
31,636	-				+0.2
31,652	+				-0.6
31,652	+				-0.6
31,672	+				-0.5
31,672	+				+0.4
31,672	+				-0.2
31,673	-				+0.7
31,673	-				-0.7
31,674	+				-0.2
31,674	+				+0.7
31,674	+				-1.3
31,674	+				-0.5
31,674	+				-0.8
31,674	+				-0.8
31,674	+				-0.6
31,674	+				+0.5
31,674	+				-0.7
31,674	+				+0.4
31,674	+				-0.3
31,674	+				-0.7
31,674	+				-0.6
31,674	+				-0.8
31,674	+				-2.6
31,674	+				-0.5
31,674	+				-1.1
31,674	+				-1.8
31,674	+				-0.6
31,674	+				+0.2
31,675	-				-0.6
31,675	-				+0.2
31,675	-				-1.0
31,675	-				+0.8
31,675	-				-0.2
31,675	-				-2.0
31,675	-				-1.8
31,675	-				-1.0
31,675	-				+0.8
31,675	-				-2.1
31,675	-				+0.0
31,675	-				-0.6
31,675	-				+0.6
31,678	+				-1.3
31,678	+				-0.2
31,678	+				-0.6
31,678	+				+0.8
31,678	+				-0.8
31,678	+				+0.8
31,678	+				-0.0
31,678	+				-0.3
31,679	-				-0.4
31,679	-				+0.2
31,679	-				+1.5
31,679	-				-0.1
31,722	-				+1.8
31,833	+				+0.8
31,833	+				-1.4
31,833	+				-1.7
31,834	-				-1.6
31,861	+				-0.9
31,861	+				+0.8
31,861	+				+1.3
31,861	+				+1.0
31,861	+				-0.3
31,861	+				+0.6
31,861	+				+1.8
31,862	-				-2.0
31,862	-				-0.4
31,862	-				+0.2
31,862	-				+0.4
31,862	-				+0.2
31,862	-				-1.0
31,862	-				+1.5
31,889	-				-1.6
31,967	+				+0.3
31,967	+				-0.8
31,968	-				-1.6
31,968	-				+0.1
31,968	-				-0.6
31,968	-				+0.1
31,984	+				+0.4
31,984	+				-1.3
31,984	+				+0.5
31,984	+				-0.8
31,984	+				+1.2
31,985	-				-0.0
31,985	-				+0.5
31,985	-				+0.2
31,985	-				-0.6
31,985	-				-0.0
31,985	-				+0.4
31,985	-				-0.2
31,985	-				-1.6
31,996	+				+0.4
31,996	+				+0.1
31,996	+				-0.5
31,997	-				-2.4
31,997	-				-3.2
31,997	-				-0.0
32,042	+				+0.2
32,042	+				-0.2
32,042	+				-1.7
32,042	+				-0.6
32,043	-				-0.7
32,043	-				+0.3
32,043	-				-1.7
32,043	-				-0.8
32,043	-				-0.0
32,103	-				-1.9
32,153	+		DZA65_RS00135	0.17	-0.1
32,237	+		DZA65_RS00135	0.35	-0.6
32,237	+		DZA65_RS00135	0.35	-0.6
32,237	+		DZA65_RS00135	0.35	-0.9
32,237	+		DZA65_RS00135	0.35	-1.7
32,237	+		DZA65_RS00135	0.35	-0.8
32,237	+		DZA65_RS00135	0.35	-1.6
32,237	+		DZA65_RS00135	0.35	-1.0
32,238	-		DZA65_RS00135	0.35	-0.0
32,238	-		DZA65_RS00135	0.35	+0.3
32,238	-		DZA65_RS00135	0.35	-2.1
32,238	-		DZA65_RS00135	0.35	+0.2
32,238	-		DZA65_RS00135	0.35	+1.0
32,238	-		DZA65_RS00135	0.35	-1.0
32,238	-		DZA65_RS00135	0.35	+1.3
32,238	-		DZA65_RS00135	0.35	+0.2
32,238	-		DZA65_RS00135	0.35	-1.4
32,238	-		DZA65_RS00135	0.35	-2.2
32,238	-		DZA65_RS00135	0.35	-0.6
32,238	-		DZA65_RS00135	0.35	+0.2
32,238	-		DZA65_RS00135	0.35	-0.6
32,238	-		DZA65_RS00135	0.35	-1.8
32,310	+		DZA65_RS00135	0.50	-1.1
32,310	+		DZA65_RS00135	0.50	-0.8
32,310	+		DZA65_RS00135	0.50	-0.6
32,310	+		DZA65_RS00135	0.50	-1.0
32,310	+		DZA65_RS00135	0.50	-1.4
32,310	+		DZA65_RS00135	0.50	-0.7
32,310	+		DZA65_RS00135	0.50	-1.4
32,310	+		DZA65_RS00135	0.50	-1.7
32,311	-		DZA65_RS00135	0.50	-0.6
32,311	-		DZA65_RS00135	0.50	-0.7
32,311	-				+0.8
32,311	-		DZA65_RS00135	0.50	+1.3
32,311	-		DZA65_RS00135	0.50	+0.8
32,317	-		DZA65_RS00135	0.52	+0.1
32,317	-		DZA65_RS00135	0.52	-1.2
32,317	-		DZA65_RS00135	0.52	+0.8
32,317	-		DZA65_RS00135	0.52	+0.4
32,370	+		DZA65_RS00135	0.63	+0.2
32,371	-		DZA65_RS00135	0.63	-0.2
32,419	+		DZA65_RS00135	0.74	+0.3
32,435	+		DZA65_RS00135	0.77	+0.1
32,474	+		DZA65_RS00135	0.85	+0.8
32,475	-		DZA65_RS00135	0.85	-2.8
32,504	+				-1.5
32,504	+				+0.8
32,504	+				+0.8
32,505	-				-1.8
32,505	-				+0.9
32,563	-				+0.2
32,572	+				-0.2
32,572	+				-1.4
32,593	-				-1.7
32,643	+				+0.6
32,643	+				-0.2
32,643	+				+1.0
32,644	-				-0.0
32,644	-				-1.7
32,644	-				-0.8
32,644	-				+0.2
32,644	-				-1.1
32,671	+				-0.6
32,671	+				-1.8
32,672	-				-0.4
32,672	-				-2.1
32,672	-				+0.8
33,003	+		DZA65_RS00140	0.84	-0.6
33,003	+		DZA65_RS00140	0.84	-0.5
33,003	+		DZA65_RS00140	0.84	-1.9
33,004	-		DZA65_RS00140	0.84	+0.2
33,004	-		DZA65_RS00140	0.84	+0.2
33,004	-		DZA65_RS00140	0.84	+0.2
33,004	-		DZA65_RS00140	0.84	-0.5
33,012	+		DZA65_RS00140	0.86	-0.6
33,012	+		DZA65_RS00140	0.86	-0.9
33,012	+		DZA65_RS00140	0.86	-0.2
33,012	+		DZA65_RS00140	0.86	-0.3
33,013	-		DZA65_RS00140	0.86	+0.3
33,013	-		DZA65_RS00140	0.86	+0.8
33,013	-		DZA65_RS00140	0.86	+0.1
33,013	-		DZA65_RS00140	0.86	-0.6
33,013	-				+0.2
33,015	+		DZA65_RS00140	0.87	-0.9
33,015	+		DZA65_RS00140	0.87	-0.0
33,015	+		DZA65_RS00140	0.87	-1.5
33,015	+		DZA65_RS00140	0.87	-1.2
33,016	-		DZA65_RS00140	0.87	-0.4
33,016	-		DZA65_RS00140	0.87	-1.7
33,016	-		DZA65_RS00140	0.87	+0.1
33,074	-				-0.7
33,104	-				-0.2
33,106	-				-1.0
33,161	+				+0.0
33,161	+				-0.5
33,161	+				+0.8
33,161	+				-1.4
33,161	+				+0.8
33,161	+				+0.2
33,161	+				+0.9
33,161	+				-0.2
33,161	+				+0.2
33,161	+				-0.8
33,161	+				+1.8
33,161	+				-1.0
33,161	+				-2.0
33,162	-				-0.0
33,162	-				+1.4
33,162	-				-0.2
33,162	-				-0.9
33,162	-				+0.3
33,162	-				-1.4
33,162	-				-2.0
33,162	-				+0.8
33,162	-				-0.4
33,162	-				-2.1
33,162	-				-0.7
33,180	+				-0.2
33,180	+				-0.0
33,180	+				-0.4
33,180	+				+0.2
33,180	+				-0.4
33,180	+				-1.8
33,181	-				-1.7
33,181	-				+0.4
33,181	-				-0.7
33,181	-				+1.2
33,181	-				-1.3
33,181	-				-0.8
33,181	-				-0.6
33,181	-				-0.4
33,181	-				-1.6
33,181	-				-2.1
33,213	-				-0.6
33,218	+				-1.1
33,218	+				-0.1
33,218	+				-0.2
33,218	+				-0.9
33,218	+				-0.0
33,218	+				+0.9
33,219	-				+0.6
33,219	-				+1.0
33,219	-				-0.9
33,219	-				+0.1
33,219	-				-0.2
33,219	-				-0.6
33,226	-				-1.2
33,236	+				+0.6
33,236	+				+0.6
33,236	+				-0.8
33,320	+		DZA65_RS00145	0.35	+0.2
33,320	+		DZA65_RS00145	0.35	+0.3
33,320	+		DZA65_RS00145	0.35	-0.6
33,332	+		DZA65_RS00145	0.39	-1.2
33,476	+		DZA65_RS00145	0.88	+0.6
33,476	+		DZA65_RS00145	0.88	-2.6
33,476	+		DZA65_RS00145	0.88	-0.4
33,476	+		DZA65_RS00145	0.88	+0.8
33,476	+		DZA65_RS00145	0.88	-1.2
33,476	+		DZA65_RS00145	0.88	-1.1
33,477	-		DZA65_RS00145	0.89	-0.3
33,477	-		DZA65_RS00145	0.89	-0.2
33,477	-		DZA65_RS00145	0.89	-0.8
33,477	-		DZA65_RS00145	0.89	-0.6
33,477	-		DZA65_RS00145	0.89	-0.4
33,477	-		DZA65_RS00145	0.89	-1.1
33,477	-		DZA65_RS00145	0.89	+1.8
33,477	-		DZA65_RS00145	0.89	-1.0
33,477	-		DZA65_RS00145	0.89	-0.2
33,477	-		DZA65_RS00145	0.89	+0.5
33,517	+				-0.9
33,517	+				+0.6
33,517	+				-0.4
33,518	-				+0.2
33,518	-				+0.0
33,518	-				-0.5
33,553	+				-0.0
33,553	+				-0.9
33,553	+				-0.4
33,553	+				-0.7
33,553	+				-0.2
33,554	-				+2.0
33,554	-				-1.0
33,554	-				+0.8
33,554	-				+1.4
33,554	-				-0.2
33,554	-				+0.6
33,554	-				+0.8
33,554	-				-0.8
33,559	+				-0.9
33,559	+				-0.5
33,559	+				+0.3
33,559	+				-0.6
33,560	-				-0.2
33,560	-				-0.2
33,614	+				+1.4
33,614	+				+0.5
33,614	+				+0.1
33,614	+				-1.2
33,615	-				-0.7
33,615	-				-2.7
33,615	-				+0.5
33,626	+				+0.9
33,626	+				-0.8
33,626	+				+0.1
33,627	-				+1.8
33,644	+				+0.5
33,644	+				-0.0
33,649	+				-0.6
33,649	+				-0.1
33,649	+				-0.9
33,649	+				-0.4
33,649	+				-0.6
33,649	+				-0.7
33,649	+				+1.8
33,649	+				-0.2
33,650	-				-0.2
33,650	-				-0.2
33,650	-				-0.8
33,650	-				-1.4
33,650	-				+0.4
33,660	-				-0.2
33,669	+				-0.9
33,669	+				+1.8
33,669	+				-0.7
33,669	+				-0.9
33,670	-				+0.2
33,670	-				+0.2
33,670	-				-0.3
33,670	-				-1.0
33,670	-				-0.8
33,670	-				-0.6
33,739	+				-1.0
33,740	-				-0.4
33,740	-				+0.2
33,746	+				-0.6
33,746	+				-1.0
33,746	+				-0.3
33,746	+				-0.8
33,781	+		DZA65_RS00150	0.14	-0.7
33,781	+		DZA65_RS00150	0.14	+1.0
33,782	-		DZA65_RS00150	0.14	-0.2
33,789	+		DZA65_RS00150	0.14	+0.9
33,789	+		DZA65_RS00150	0.14	-1.3
33,790	-		DZA65_RS00150	0.14	+0.8
33,817	+		DZA65_RS00150	0.17	+0.4
33,817	+		DZA65_RS00150	0.17	-0.1
33,817	+		DZA65_RS00150	0.17	-0.8
33,832	+		DZA65_RS00150	0.19	-0.8
33,832	+		DZA65_RS00150	0.19	-2.3
33,832	+		DZA65_RS00150	0.19	-0.4
33,832	+		DZA65_RS00150	0.19	-0.4
33,832	+		DZA65_RS00150	0.19	-1.1
33,833	-		DZA65_RS00150	0.19	+0.4
33,833	-		DZA65_RS00150	0.19	+1.2
33,833	-		DZA65_RS00150	0.19	+0.8
33,833	-		DZA65_RS00150	0.19	-0.2
34,049	+		DZA65_RS00150	0.41	-0.1
34,050	-		DZA65_RS00150	0.41	+0.5