Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS23505

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,169,967	-		DDA3937_RS05240	0.75	-0.2
1,170,140	+				+0.2
1,170,140	+				-0.8
1,170,141	-				+0.0
1,170,143	+				-2.0
1,170,143	+				-0.2
1,170,143	+				+0.7
1,170,144	-				-0.7
1,170,144	-				-1.3
1,170,144	-				+0.2
1,170,245	+		DDA3937_RS05245	0.15	-0.2
1,170,245	+		DDA3937_RS05245	0.15	+0.3
1,170,245	+		DDA3937_RS05245	0.15	+1.3
1,170,264	+		DDA3937_RS05245	0.19	-0.1
1,170,325	-		DDA3937_RS05245	0.33	-1.5
1,170,350	+		DDA3937_RS05245	0.39	+0.5
1,170,366	+		DDA3937_RS05245	0.43	-0.7
1,170,366	+		DDA3937_RS05245	0.43	-1.7
1,170,367	-		DDA3937_RS05245	0.43	+0.0
1,170,448	-		DDA3937_RS05245	0.62	-0.1
1,170,448	-		DDA3937_RS05245	0.62	-0.5
1,170,490	+		DDA3937_RS05245	0.71	+0.0
1,170,491	-		DDA3937_RS05245	0.71	+0.4
1,170,563	-		DDA3937_RS05245	0.88	+0.4
1,170,563	-		DDA3937_RS05245	0.88	-0.2
1,170,605	+				-0.2
1,170,605	+				+0.5
1,170,606	-				-1.2
1,170,615	-				-0.3
1,170,615	-				-0.2
1,170,660	-				+0.6
1,170,681	-				-0.7
1,170,685	+				-0.2
1,170,686	-				-0.6
1,170,692	+				-0.6
1,170,692	+				+0.1
1,170,693	-				+0.1
1,170,693	-				+0.1
1,170,694	+				+1.3
1,170,694	+				+0.7
1,170,694	+				+0.5
1,170,695	-				+0.0
1,170,695	-				+0.3
1,170,695	-				+0.2
1,170,695	-				-0.7
1,170,695	-				-0.3
1,170,698	+				+0.7
1,170,699	-				+0.2
1,170,699	-				-0.2
1,170,789	+				-0.1
1,170,846	-				-0.5
1,170,846	-				+0.2
1,171,005	+		DDA3937_RS23505	0.24	-0.7
1,171,005	+		DDA3937_RS23505	0.24	-0.8
1,171,006	-				-1.6
1,171,024	+		DDA3937_RS23505	0.34	-0.2
1,171,025	-		DDA3937_RS23505	0.35	-2.5
1,171,037	+		DDA3937_RS23505	0.42	-2.4
1,171,172	+				-0.5
1,171,221	+				+0.2
1,171,271	+		DDA3937_RS05255	0.15	-0.7
1,171,272	-		DDA3937_RS05255	0.15	+0.6
1,171,275	-		DDA3937_RS05255	0.15	+0.1
1,171,305	-		DDA3937_RS05255	0.19	-0.1
1,171,422	-		DDA3937_RS05255	0.33	+0.4
1,171,556	+		DDA3937_RS05255	0.48	-0.8
1,171,556	+		DDA3937_RS05255	0.48	-1.9
1,171,557	-		DDA3937_RS05255	0.49	+0.5
1,171,607	+		DDA3937_RS05255	0.54	+0.2
1,171,662	+		DDA3937_RS05255	0.61	-0.9
1,171,662	+		DDA3937_RS05255	0.61	-0.4
1,171,662	+		DDA3937_RS05255	0.61	+0.7
1,171,695	-		DDA3937_RS05255	0.65	+1.4
1,171,710	+		DDA3937_RS05255	0.67	-0.5
1,171,711	-		DDA3937_RS05255	0.67	+0.9
1,171,711	-				+0.7
1,171,711	-		DDA3937_RS05255	0.67	-0.3
1,171,871	-		DDA3937_RS05255	0.86	-0.0
1,171,882	-		DDA3937_RS05255	0.87	-1.4
1,171,898	-		DDA3937_RS05255	0.89	-0.8
1,171,931	-				-0.2
1,171,981	+				-0.1
1,171,982	-				-0.1