Strain Fitness in Dickeya dadantii 3937 around DDA3937_RS23495

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,162,184	+		DDA3937_RS22350	0.32	-0.1
3,162,189	+		DDA3937_RS22350	0.32	-0.3
3,162,252	+		DDA3937_RS22350	0.39	-0.5
3,162,252	+		DDA3937_RS22350	0.39	-0.1
3,162,264	+		DDA3937_RS22350	0.40	+0.0
3,162,265	-		DDA3937_RS22350	0.40	+0.2
3,162,280	+		DDA3937_RS22350	0.42	+0.2
3,162,281	-		DDA3937_RS22350	0.42	-0.5
3,162,328	+		DDA3937_RS22350	0.47	-0.5
3,162,329	-		DDA3937_RS22350	0.47	+0.1
3,162,329	-		DDA3937_RS22350	0.47	-0.7
3,162,397	-		DDA3937_RS22350	0.54	-0.1
3,162,546	+		DDA3937_RS22350	0.70	+3.5
3,162,561	-		DDA3937_RS22350	0.71	-1.8
3,162,726	+		DDA3937_RS22350	0.88	-1.1
3,162,726	+		DDA3937_RS22350	0.88	-1.8
3,162,739	-		DDA3937_RS22350	0.90	-0.7
3,162,784	+				+0.8
3,162,839	-				-1.5
3,162,870	-				-0.0
3,162,885	+				-0.5
3,163,063	+				+1.5
3,163,189	-		DDA3937_RS23495	0.25	-1.1
3,163,289	+		DDA3937_RS23495	0.41	+0.0
3,163,290	-		DDA3937_RS23495	0.41	-2.1
3,163,290	-		DDA3937_RS23495	0.41	-0.9
3,163,396	-		DDA3937_RS23495	0.57	-0.5
3,163,403	-		DDA3937_RS23495	0.58	-0.7
3,163,573	-		DDA3937_RS23495	0.85	+0.5
3,163,645	-				+0.8
3,163,704	+				-0.1
3,163,707	-				-0.6
3,163,720	+				-1.4
3,163,721	-				-0.4
3,163,721	-				-0.3
3,163,724	+				-0.6
3,163,724	+				-0.3
3,163,725	-				-0.1
3,163,726	+				+0.9
3,163,727	-				-1.5
3,163,727	-				-1.5
3,163,727	-				-1.8
3,163,727	-				-0.4
3,163,727	-				+0.5
3,163,733	+				-0.5
3,163,734	-				-0.9
3,163,734	-				-1.6
3,163,836	+				+0.1
3,163,837	-				-0.1
3,163,878	+				-1.3
3,163,878	+				-0.5
3,163,878	+				-0.4
3,163,879	-				+1.5
3,163,934	-				-0.5
3,164,009	+				-0.7
3,164,009	+				+1.5
3,164,010	-				-0.2
3,164,058	-		DDA3937_RS13905	0.17	+0.5
3,164,215	-		DDA3937_RS13905	0.52	-1.5
3,164,238	+		DDA3937_RS13905	0.57	+0.0
3,164,238	+		DDA3937_RS13905	0.57	-0.3
3,164,239	-				+0.5
3,164,255	+		DDA3937_RS13905	0.61	-0.7
3,164,271	+		DDA3937_RS13905	0.65	+0.5
3,164,271	+		DDA3937_RS13905	0.65	-0.1
3,164,272	-		DDA3937_RS13905	0.65	+0.3
3,164,291	+		DDA3937_RS13905	0.69	+0.2
3,164,291	+		DDA3937_RS13905	0.69	-1.3
3,164,345	+		DDA3937_RS13905	0.81	-1.3
3,164,346	-		DDA3937_RS13905	0.82	-0.5
3,164,384	-				-0.8
3,164,417	+				-0.0
3,164,417	+				-0.6
3,164,417	+				-1.3
3,164,417	+				+0.1
3,164,417	+				-0.1
3,164,417	+				+2.5
3,164,417	+				-1.0
3,164,418	-				-1.3
3,164,418	-				-0.2
3,164,418	-				-0.9
3,164,418	-				-0.2
3,164,421	+				-0.5
3,164,452	+				-0.5
3,164,452	+				-0.5
3,164,470	+				-0.6
3,164,470	+				+0.3
3,164,470	+				-0.2
3,164,471	-				+0.0
3,164,471	-				+0.1
3,164,471	-				-0.5
3,164,471	-				-0.3
3,164,479	-				-0.4
3,164,481	+				-0.4
3,164,482	-				-0.3
3,164,503	+				-0.2
3,164,504	-				+0.3
3,164,504	-				-0.5
3,164,504	-				+0.2
3,164,504	-				-1.3
3,164,504	-				-0.5
3,164,516	+				-0.2
3,164,517	-				-1.1
3,164,550	-				-1.2
3,164,550	-				+0.1
3,164,577	-				-0.5
3,164,577	-				-1.2
3,164,577	-				-1.0
3,164,610	+				-0.1
3,164,611	-				+0.9
3,164,614	+				+0.1
3,164,614	+				-0.2
3,164,614	+				-1.0
3,164,615	-				-0.8
3,164,615	-				-1.3
3,164,615	-				-1.2
3,164,628	+				-0.6
3,164,628	+				+0.5
3,164,628	+				-2.1
3,164,628	+				+0.5
3,164,629	-				+0.1
3,164,629	-				-0.7
3,164,629	-				-0.7
3,164,629	-				-0.5